Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g00400.t01
CDS Infomation

cds chromosome:12X:16:17218589:17219782:-1 gene:VIT_16s0050g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTAATTTTGGCTTGATGTCCCTGGCAGTCCTGGCTCTTACACTTGCTGTTTGT
GTGCAAGGTTCTCTAGGAGGAATAACATGTGAGAATCTGAACAAAGACACGTGCGCCTAC
GCGGTGTCATCGTCCGGTAAGCGCTGTGTGCTTGAGAAGCATGTGAGGAGGAGCGGAGAG
GAAGCATATGTGTGCAGGACGTCGGAGATTGAGGCGGACAAGGTGAAGGACTGGGTGGAG
AGCGACCAGTGCATTGAAGCCTGTGGGGTTGATAGGAAATCGCTAGGGATTTCATCGGAT
TCTCTCCTGGAGTGTGGGTTCACCCATAAGCTTTGCTCTTCTCAGTGCTATAACAGCTGC
CCCAACATTGTTGATCTCTACTTCAATCTCGCTGCCGGTGAAGGTGTATTTCTGCCAAAA
CTGTGTGAAGCACAAAGGGGAGATGCGAGGAGAGAAATGGCGGAGATCCGAAGTTCTGGT
TTTGTGGCACCAGGGCCAGTATCAGGGGTCAATCCTGTGAAGTTCGGGGTTGCCCCTGCA
GTGGCCCCTGCTTCATCATAG

Peptide Sequence

PEP ID

VIT_16s0050g00400.t01
PEP Infomation

pep chromosome:12X:16:17218589:17219782:-1 gene:VIT_16s0050g00400 transcript:VIT_16s0050g00400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASNFGLMSLAVLALTLAVCVQGSLGGITCENLNKDTCAYAVSSSGKRCVLEKHVRRSGE
EAYVCRTSEIEADKVKDWVESDQCIEACGVDRKSLGISSDSLLECGFTHKLCSSQCYNSC
PNIVDLYFNLAAGEGVFLPKLCEAQRGDARREMAEIRSSGFVAPGPVSGVNPVKFGVAPA
VAPASS

Transcript Sequence

Transcript ID

VIT_16s0050g00400.t01
Transcript Infomation

cdna chromosome:12X:16:17218589:17219782:-1 gene:VIT_16s0050g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTAATTTTGGCTTGATGTCCCTGGCAGTCCTGGCTCTTACACTTGCTGTTTGT
GTGCAAGGTTCTCTAGGAGGAATAACATGTGAGAATCTGAACAAAGACACGTGCGCCTAC
GCGGTGTCATCGTCCGGTAAGCGCTGTGTGCTTGAGAAGCATGTGAGGAGGAGCGGAGAG
GAAGCATATGTGTGCAGGACGTCGGAGATTGAGGCGGACAAGGTGAAGGACTGGGTGGAG
AGCGACCAGTGCATTGAAGCCTGTGGGGTTGATAGGAAATCGCTAGGGATTTCATCGGAT
TCTCTCCTGGAGTGTGGGTTCACCCATAAGCTTTGCTCTTCTCAGTGCTATAACAGCTGC
CCCAACATTGTTGATCTCTACTTCAATCTCGCTGCCGGTGAAGGTGTATTTCTGCCAAAA
CTGTGTGAAGCACAAAGGGGAGATGCGAGGAGAGAAATGGCGGAGATCCGAAGTTCTGGT
TTTGTGGCACCAGGGCCAGTATCAGGGGTCAATCCTGTGAAGTTCGGGGTTGCCCCTGCA
GTGGCCCCTGCTTCATCATAGATTTTTAAATAAAGTAGACAGTTAGAAACTTAATACACA
GGAAGGATTGGAAGTCAGTTAGTTGCTACCATAATAAAAGGTTTGAATCAAAGTATTAGA
TGCCTGGCTTGAAGGGGGCTATATATCACTTTGGTGTGTTCAACTCTCAAGTCATGTGCT
GAGTGCGCGTAGAACAGGATAGGTATACATTTCACGAAACCATTCTAGTCAATAAGGTGA
TCCTCGTACTTCATTCACCATGATTGAAACATGTTTTGTTATTCACACAAGGTTATTACT
TATGGTTGGTACACTCTATGGATTGTAATGGTTTCGAGAGATGAAATAAAAATAAGTACT
TGGATTGCATTTGTCA