Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0050g00390.t01
CDS Infomation

cds chromosome:12X:16:17209326:17213833:-1 gene:VIT_16s0050g00390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAGTCTTACTCTCACCGGATTGTTGAAACAGGTCGCCGGAGAATTCCCTTCCCGT
CGAGCACTCTCCGTTTCCGGCAAGTTCGATCTCACCTACGCTCGCCTTCACCAACTTGTT
GAAGGAGCGGCCTCTCTGATCCTCGCCGGTGGCGTTAAGGCTGGAGACGTCGTCGCTCTC
ACCTTCCCAAACACCGTTGAGTTCGTGATCATGTTTTTGGCTGTAATACGAGTACGAGCC
ACAGCTGCGCCTTTGAACTCAGCTTACACAGCAGACGAGTTCGAGTTTTACTTATCCGAC
TCGGAATCGAAGCTTCTCTTAACATCGCAAGAAGGAAACGAGGCAGCACAAGCCGCGGCT
TCCAAGCTCAAAATCACACACGCCACGGCTTCCCTTACCGAAGCCGAAGCCCAGGTAAAT
CTATCCTTGATTCACTCCGAGCCGGACCCTCACTCGGTAGCCAAACTCGTGAACGAGCCA
TCCGACGTGGCACTTTTCTTGCACACTTCCGGCACGACGAGTCGACCCAAAGGAGTGCCA
CTGAGTCAACTCAACTTGGCCTCATCGGTTCAGAATATCAAATCGGTGTACAAACTCACC
GAGTCAGACTCCACCGTCATCGTGCTTCCTCTCTTCCACGTTCACGGCTTACTCGCAGGT
TTACTGAGTTCACTAGGCGCAGGAGCCGCCGTGACCCTACCCGCCGCTGGCCGATTCTCG
GCTTCAACATTCTGGTCCGACATGCTCAAATACGATGCCACGTGGTACACCGCCGTCCCC
ACGATCCACCAAATTATCCTGGATCGCCACCTTAGCAAACCCGAACCCGTTTACCCGAAG
CTTCGATTCATCCGGAGTTGCAGCGCTTCTCTGGCACCAGCCATAATGGCTCGGCTCGAG
GAGGCGTTTGGTGCACCTGTGTTGGAAGCATATGCCATGACCGAAGCGACCCATCTCATG
GCTTCGAACCCTTTACCCGAAAACGGTCCGCATAAACCCGGGTCCGTTGGAAGACCAGTG
GGCCAAGAGATGGCGATATTGGATGAAAATGGCGTCCAACAGGAGGCTAACGTGAGTGGG
GAAGTGTGTATTAGGGGCCCTAATGTGACCAAGGGTTACAAAAACAACCCTGAGGCTAAT
AAATCAGCTTTTCAATTCGGGTGGTTTCACACAGGGGATCTCGGGTTCTTTGACCCGGAT
GGTTATTTGCATCTTGTTGGTCGAATCAAGGAACTCATCAACCGTGGAGGAGAGAAGATA
TCACCAATCGAAGTGGATGCTGTCCTTTTATCACATCCAGACATTGCTCAAGCGGTTGCT
TTTGGGGTTCCAGATGACAAATACGGCGAAGAGATAAACTGTGCCATCATTCCAAGAGAA
GGATCAGACATCGATGAAGCAGAGGTAACGAGGTTTTGCAAGAAAAATCTTGCCGCCTTT
AAGGTTCCCAAGAAGGTGTTCATCACTGATTCTCTCCCAAAGACGGCTACTGGGAAGATC
CAGCGAAGAATTGTGGCTGAGCACTTCCTTGCCCAAATCTCTACTGCTAAAGTCCCAAAG
TTTGGGGCATAG

Peptide Sequence

PEP ID

VIT_16s0050g00390.t01
PEP Infomation

pep chromosome:12X:16:17209326:17213833:-1 gene:VIT_16s0050g00390 transcript:VIT_16s0050g00390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESLTLTGLLKQVAGEFPSRRALSVSGKFDLTYARLHQLVEGAASLILAGGVKAGDVVAL
TFPNTVEFVIMFLAVIRVRATAAPLNSAYTADEFEFYLSDSESKLLLTSQEGNEAAQAAA
SKLKITHATASLTEAEAQVNLSLIHSEPDPHSVAKLVNEPSDVALFLHTSGTTSRPKGVP
LSQLNLASSVQNIKSVYKLTESDSTVIVLPLFHVHGLLAGLLSSLGAGAAVTLPAAGRFS
ASTFWSDMLKYDATWYTAVPTIHQIILDRHLSKPEPVYPKLRFIRSCSASLAPAIMARLE
EAFGAPVLEAYAMTEATHLMASNPLPENGPHKPGSVGRPVGQEMAILDENGVQQEANVSG
EVCIRGPNVTKGYKNNPEANKSAFQFGWFHTGDLGFFDPDGYLHLVGRIKELINRGGEKI
SPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSDIDEAEVTRFCKKNLAAF
KVPKKVFITDSLPKTATGKIQRRIVAEHFLAQISTAKVPKFGA

Transcript Sequence

Transcript ID

VIT_16s0050g00390.t01
Transcript Infomation

cdna chromosome:12X:16:17209326:17213833:-1 gene:VIT_16s0050g00390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTTCTATCTCTTTTTAGTTAGGTTAGACCAAAGTTAGATTTGGTCAATAAATAGTAGGC
TCACCATTCCTGTCCTGAAATGTCATATTAAATTACTTCAAGTTGTGACTCAAATCCTAA
TAATAATAATTAATTAATGAGTTATATTCAAAAATTCAATAAAGTATATGATAAAGCATA
TTAAATTACCATTCAAACCAAAAATTGTAACACTATAGCGAAACCTTACGGTCTCGAGAT
GGGTCATTTTGTTACCCAACCAACACGTGCCACGTAATCCACTGCCATCTACGTTGGCAA
ACGTAACCCAGTTCGCTTTCACCGGTCATCACCACCGGTGGAGGGCAAGCATTCGCCCAC
GTCACGGCGTAACCAACAGCTAAACATACACGCGTTTGAAAAGCCAAACGGAGAAGTTCA
GCCTTTTCTGGAAGGTGCAGTCCCCGAGGATGGCACACTCATCACTGACCCTATATTTTA
GCCACGTGGCATCCCTACCTGATCTTGCCAGGTGGCCAGCCTTACCCACCTCTCGCCTCC
ACCGAAGCCACCGCTTATTTGTTCCTCTTTTTCTGGCCCCTATATATAGAGGGATATTCA
CCACCTTATGCATCCTCATCTTTCTCTCTCTAAAATCTGCGTTTTGTGGTTTTATTGAAA
AGCGATAAGATTCTTGTGTGGAATGATGGAAAGTCTTACTCTCACCGGATTGTTGAAACA
GGTCGCCGGAGAATTCCCTTCCCGTCGAGCACTCTCCGTTTCCGGCAAGTTCGATCTCAC
CTACGCTCGCCTTCACCAACTTGTTGAAGGAGCGGCCTCTCTGATCCTCGCCGGTGGCGT
TAAGGCTGGAGACGTCGTCGCTCTCACCTTCCCAAACACCGTTGAGTTCGTGATCATGTT
TTTGGCTGTAATACGAGTACGAGCCACAGCTGCGCCTTTGAACTCAGCTTACACAGCAGA
CGAGTTCGAGTTTTACTTATCCGACTCGGAATCGAAGCTTCTCTTAACATCGCAAGAAGG
AAACGAGGCAGCACAAGCCGCGGCTTCCAAGCTCAAAATCACACACGCCACGGCTTCCCT
TACCGAAGCCGAAGCCCAGGTAAATCTATCCTTGATTCACTCCGAGCCGGACCCTCACTC
GGTAGCCAAACTCGTGAACGAGCCATCCGACGTGGCACTTTTCTTGCACACTTCCGGCAC
GACGAGTCGACCCAAAGGAGTGCCACTGAGTCAACTCAACTTGGCCTCATCGGTTCAGAA
TATCAAATCGGTGTACAAACTCACCGAGTCAGACTCCACCGTCATCGTGCTTCCTCTCTT
CCACGTTCACGGCTTACTCGCAGGTTTACTGAGTTCACTAGGCGCAGGAGCCGCCGTGAC
CCTACCCGCCGCTGGCCGATTCTCGGCTTCAACATTCTGGTCCGACATGCTCAAATACGA
TGCCACGTGGTACACCGCCGTCCCCACGATCCACCAAATTATCCTGGATCGCCACCTTAG
CAAACCCGAACCCGTTTACCCGAAGCTTCGATTCATCCGGAGTTGCAGCGCTTCTCTGGC
ACCAGCCATAATGGCTCGGCTCGAGGAGGCGTTTGGTGCACCTGTGTTGGAAGCATATGC
CATGACCGAAGCGACCCATCTCATGGCTTCGAACCCTTTACCCGAAAACGGTCCGCATAA
ACCCGGGTCCGTTGGAAGACCAGTGGGCCAAGAGATGGCGATATTGGATGAAAATGGCGT
CCAACAGGAGGCTAACGTGAGTGGGGAAGTGTGTATTAGGGGCCCTAATGTGACCAAGGG
TTACAAAAACAACCCTGAGGCTAATAAATCAGCTTTTCAATTCGGGTGGTTTCACACAGG
GGATCTCGGGTTCTTTGACCCGGATGGTTATTTGCATCTTGTTGGTCGAATCAAGGAACT
CATCAACCGTGGAGGAGAGAAGATATCACCAATCGAAGTGGATGCTGTCCTTTTATCACA
TCCAGACATTGCTCAAGCGGTTGCTTTTGGGGTTCCAGATGACAAATACGGCGAAGAGAT
AAACTGTGCCATCATTCCAAGAGAAGGATCAGACATCGATGAAGCAGAGGTAACGAGGTT
TTGCAAGAAAAATCTTGCCGCCTTTAAGGTTCCCAAGAAGGTGTTCATCACTGATTCTCT
CCCAAAGACGGCTACTGGGAAGATCCAGCGAAGAATTGTGGCTGAGCACTTCCTTGCCCA
AATCTCTACTGCTAAAGTCCCAAAGTTTGGGGCATAGGAAAAAAATAAATCAATAAAGAT
AAGGCAATTCCTTAAATCCTTGGGCAAATATCCAGGTATTTGTAAAACATTTTGCTCCCT
TAGAATTCATTAGATGTATGTTCTTCCCATTTTTTCCTTATGCCCAATTTCAATGTCACC
TGGTATCTCAGCATTGG