Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g02800.t01
CDS Infomation

cds chromosome:12X:16:3328243:3332478:-1 gene:VIT_16s0039g02800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAATTGTAAAGCCCAAGGCAGTTGTAAAGCCCAAGACAAGTGATGGCAATTCCACC
TCCAGCGGTCGAGATACCCTGGGCCGGAGGCTTCTAAGTCTTGTATATGCAAAACGTAGT
GCAGTCATAGCAATACAAAGATGGAGAGAAGAAGGCCACACAGTTCGAAAGTACGAGCTC
AATCGCATTGTTCGAGAGCTCCGCAAGCTTAAGCGCTACAAGCATGCCCTTGAGATATGT
GAATGGATGACAAAGCAACACGATATCAAGCTGTTAGCAGGTGACTATGCTGTCCATCTG
GATTTGATTGCAAAAATTCGTGGTTTAGCTAGTGCGGAAAAGTTTTTCGAAGATCTTTCA
GATAAGATGAAAGGTCAGCCCACTTGTACTGCCCTTCTCCACACCTATGTCCAGAACAAG
GTGTCTGAAAAAGCTGAGGCTCTCATGGAAAAAATGTCTGAATGTGGTTTCCTGAAGTGT
CCTCTTCCTTATAACCACATGATATCTTTATACATCTCAGATGGACAATTAGAGAAGGTT
CCAGGAATGATTCAGGAGTTAAAAAAGAATACCTCACCAGATGTGGTTACTTACAATCTA
TGGTTAACTGTATGTGCTTCACAGAATGATGTCGAAACTGCAGAAAAGGTACTCCTTGAG
ATAAAAAAGGCCAAAATAGATCCTGATTGGGTAACATATAGTTCATTGACCAACTTGTAT
ATTAAAAAGGGACTCCTTGACAAGGCAGCCACCACTTTGAACGAGATGGAGAAAAGGACT
TCCCGAAAAGGTCGAATTGCTTATTCCTCCCTTATCAGCTTGCACACGAATATGCAAGAT
AAAGATGGTGTTCACCGAATATGGAAGAAGCTAAAGTCTATTTTCCACAAAATGAATGAT
GCTGAATATACTTGCATGATATCCTCACTTGTGAAACTGGGGGAGTTTGAAGAAGCTGAG
AATCTCTATTCTGAATGGACATCAGTTTCTCCAACTGGTGACTCTAGGGTCCCTAATATA
CTTCTTGCAGCTTACATCAATAAAAATGAGATGGAAATGGCTGAGAAATTCTACAATCAG
ATGGTGGAAAGAGGAATTACTCCTAGTTACACCACTTGGGAGCTGCTTACCTGGGGTTAT
TTGAAAAAGAAGCAGATGGAAAAAGTCTTGGATTATTTTGAGAAAGCTGTTGGTAGTGTC
AAGAAATGGAATCCAGATGAAAAGTTGGTTAGAGAAGTATACAAGAACCTTGAAGAGCAA
GGCAACATTGAAGGGGCAGAGAAGGTATTGGTCATTCTTCGGAAGGCAGGTCATGTGAGC
ACAGAGATATACAATTGGCTTCTAAGAGCTTATGCAAAGGCTGGTAAAATGCCATTAATA
GTTGCAGAGTGGATGAAGAAGGACAAGGTTGAGATGGATGAAGAGACTCATAGGCTTATC
AAAGAAACTAGCAAAATGTGTGTGAGTGAAGTTTCAAGCAAATTTTGTTTAGCTTAG

Peptide Sequence

PEP ID

VIT_16s0039g02800.t01
PEP Infomation

pep chromosome:12X:16:3328243:3332478:-1 gene:VIT_16s0039g02800 transcript:VIT_16s0039g02800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAIVKPKAVVKPKTSDGNSTSSGRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYEL
NRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLS
DKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKV
PGMIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLY
IKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMND
AEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQ
MVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQ
GNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLI
KETSKMCVSEVSSKFCLA

Transcript Sequence

Transcript ID

VIT_16s0039g02800.t01
Transcript Infomation

cdna chromosome:12X:16:3328243:3332478:-1 gene:VIT_16s0039g02800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAATTGTAAAGCCCAAGGCAGTTGTAAAGCCCAAGACAAGTGATGGCAATTCCACC
TCCAGCGGTCGAGATACCCTGGGCCGGAGGCTTCTAAGTCTTGTATATGCAAAACGTAGT
GCAGTCATAGCAATACAAAGATGGAGAGAAGAAGGCCACACAGTTCGAAAGTACGAGCTC
AATCGCATTGTTCGAGAGCTCCGCAAGCTTAAGCGCTACAAGCATGCCCTTGAGATATGT
GAATGGATGACAAAGCAACACGATATCAAGCTGTTAGCAGGTGACTATGCTGTCCATCTG
GATTTGATTGCAAAAATTCGTGGTTTAGCTAGTGCGGAAAAGTTTTTCGAAGATCTTTCA
GATAAGATGAAAGGTCAGCCCACTTGTACTGCCCTTCTCCACACCTATGTCCAGAACAAG
GTGTCTGAAAAAGCTGAGGCTCTCATGGAAAAAATGTCTGAATGTGGTTTCCTGAAGTGT
CCTCTTCCTTATAACCACATGATATCTTTATACATCTCAGATGGACAATTAGAGAAGGTT
CCAGGAATGATTCAGGAGTTAAAAAAGAATACCTCACCAGATGTGGTTACTTACAATCTA
TGGTTAACTGTATGTGCTTCACAGAATGATGTCGAAACTGCAGAAAAGGTACTCCTTGAG
ATAAAAAAGGCCAAAATAGATCCTGATTGGGTAACATATAGTTCATTGACCAACTTGTAT
ATTAAAAAGGGACTCCTTGACAAGGCAGCCACCACTTTGAACGAGATGGAGAAAAGGACT
TCCCGAAAAGGTCGAATTGCTTATTCCTCCCTTATCAGCTTGCACACGAATATGCAAGAT
AAAGATGGTGTTCACCGAATATGGAAGAAGCTAAAGTCTATTTTCCACAAAATGAATGAT
GCTGAATATACTTGCATGATATCCTCACTTGTGAAACTGGGGGAGTTTGAAGAAGCTGAG
AATCTCTATTCTGAATGGACATCAGTTTCTCCAACTGGTGACTCTAGGGTCCCTAATATA
CTTCTTGCAGCTTACATCAATAAAAATGAGATGGAAATGGCTGAGAAATTCTACAATCAG
ATGGTGGAAAGAGGAATTACTCCTAGTTACACCACTTGGGAGCTGCTTACCTGGGGTTAT
TTGAAAAAGAAGCAGATGGAAAAAGTCTTGGATTATTTTGAGAAAGCTGTTGGTAGTGTC
AAGAAATGGAATCCAGATGAAAAGTTGGTTAGAGAAGTATACAAGAACCTTGAAGAGCAA
GGCAACATTGAAGGGGCAGAGAAGGTATTGGTCATTCTTCGGAAGGCAGGTCATGTGAGC
ACAGAGATATACAATTGGCTTCTAAGAGCTTATGCAAAGGCTGGTAAAATGCCATTAATA
GTTGCAGAGTGGATGAAGAAGGACAAGGTTGAGATGGATGAAGAGACTCATAGGCTTATC
AAAGAAACTAGCAAAATGTGTGTGAGTGAAGTTTCAAGCAAATTTTGTTTAGCTTAGAAG
GGAGTGATCTTTGAGACGGATGAAAGAGTTGGAACTCTTTTGGGAACTTGGAGCACATCA
AGTATACTCTTCAACAGCATGGCATTTGAGTTTGATTTGATTTTGTATCTCATAAAAATC
TTTACTCTGGCCATTCTGTAGCATACCTCCATGAACAGAAACAATCTCCCATTTGATATC
ACAAAGTTGCAACTGAATCTGTCCTCACAAAAGTTGTGCAGTTGAAGGTGCAGTGAGACT
ATGGCTGCCGTTGTCCAATCTATCTTCAGTTTCAGGAACCCTTTTCAATGGTTTGGAATT
GGCAGATCCATGATCATTGACCTGCACCCTGTTTGTGAT