Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g02560.t01
CDS Infomation

cds chromosome:12X:16:2800685:2803228:-1 gene:VIT_16s0039g02560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCACTTCATGGTCTCTCTTATGGGTCCACCATTTCCAACTTTGATCAATACCCACATG
AAAAACAAGCATCAAGTCAGTGTAGAAGAGGTTTCCATTTCAGAAAATGGGGAAGAGCTC
TCTGGGGTTGTGTACAATGCTAGGATTAGGGAAAGTTGCAGAGTAGGGGATGTTGATAAG
GCCATGAAGCTGTTAGCTCAAATGGAGGCTCTCGGGTTTAGTCTTAGCTTGGGAAGTTAC
ACCACTGTAATTGAGGCCTTAGGGAGTGTTGGGAGGACCTTGGAAGCCGAGGCCATTTTT
AGGGAAATGGTGCATTTGGGGTTGAAGCTTGATTTGAGGGTGTATAATGTGATGCTTAGA
AGCTGTTTGAGAAAAGGCCTGTTAGAGCTTGCAGATAAAGTTTTGGCGGAAATGGATGCT
TTAGGAATTGGGAGGAACCGAGCAACTTATGAGGCCCTTGTTGATTATTATGGCCGTGCA
GGGCGGTTAAATGATGTTTGGGCGGTTATCGGTGAAATGAGTAGGGATGGATTTGGACCA
GACTCATTTGTATATAGTAAGGTGATTGGTGTGTATAGGGATAATGGGATGTGGAAGAAA
GCAATGGAGATTGTGAGAGAGATAAGGGAGATGGGGGTTTCACTAGACAAGAGGATTTAT
AATAGCATAATTGATACGTTTGGCAAGTGTGGTGAGTTGAGTGAGGCCTTGGAAGTGTTT
GAGAAAATGCAGGAAGAAGGCGTGAAACCGGATATAATGACATGGAATTCTTTGATTCAG
TGGCACTGCAAGGCAGGGGATGTCGGTAAAGCACTTGAGTTATTTAGTAAGATGCAAGAA
GAAGGGTTGTACCCTGACCCGAAGATCTTCATCACTATCATCAGCCGTTTAGGGGAGCAG
GGGAAGTGGGATGTGATAAAAAGGAATTTTGAGAATATGAAATGCAGAGGGCATCAAAGA
AGTGGTGCCATTTATGCCATTCTGGTTGATATTTATGGGCAGTATGGAAGATTCCAGGGC
CCGGAAGAGTGCATATCTGCTTTAAAATCGGAAGGTATTCAGCCATCAGCTAGCATGTTT
TGTGTGTTGGCAAATGCATATGCTCAACAGGGTTTATGTGAGCAAACAGTTAAGGTTCTT
CAGCTCATGGAGACAGAAGGAATTGAACCAAACCTTATAATGCTGAACATGTTGATCAAT
GCATTTGGCATTGCTGGGAGACATTTGGAGGCTCTATCAGTTTATCATCATATAAAAGAC
ACAGGTATCAGTCCTGATGTGGTCACTTACAGTACACTTATGAAGGCATGTATTAGGGCA
AGAAAGTTTGACAAGGTCCCTGAGATATATGAGGAAATGGAATCTGCTGGATGTACTCCA
GATAGGAAGGCTAGAGAGATGCTTCAAACTGCACTTTTGGTCCTGCAGCAGAGACATTGT
AAGTATTACTTCGGGTGCATATCTATGGTGTAA

Peptide Sequence

PEP ID

VIT_16s0039g02560.t01
PEP Infomation

pep chromosome:12X:16:2800685:2803228:-1 gene:VIT_16s0039g02560 transcript:VIT_16s0039g02560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHFMVSLMGPPFPTLINTHMKNKHQVSVEEVSISENGEELSGVVYNARIRESCRVGDVDK
AMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLR
SCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGP
DSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVF
EKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQ
GKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMF
CVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKD
TGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTPDRKAREMLQTALLVLQQRHC
KYYFGCISMV

Transcript Sequence

Transcript ID

VIT_16s0039g02560.t01
Transcript Infomation

cdna chromosome:12X:16:2800685:2803228:-1 gene:VIT_16s0039g02560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCACTTCATGGTCTCTCTTATGGGTCCACCATTTCCAACTTTGATCAATACCCACATG
AAAAACAAGCATCAAGTCAGTGTAGAAGAGGTTTCCATTTCAGAAAATGGGGAAGAGCTC
TCTGGGGTTGTGTACAATGCTAGGATTAGGGAAAGTTGCAGAGTAGGGGATGTTGATAAG
GCCATGAAGCTGTTAGCTCAAATGGAGGCTCTCGGGTTTAGTCTTAGCTTGGGAAGTTAC
ACCACTGTAATTGAGGCCTTAGGGAGTGTTGGGAGGACCTTGGAAGCCGAGGCCATTTTT
AGGGAAATGGTGCATTTGGGGTTGAAGCTTGATTTGAGGGTGTATAATGTGATGCTTAGA
AGCTGTTTGAGAAAAGGCCTGTTAGAGCTTGCAGATAAAGTTTTGGCGGAAATGGATGCT
TTAGGAATTGGGAGGAACCGAGCAACTTATGAGGCCCTTGTTGATTATTATGGCCGTGCA
GGGCGGTTAAATGATGTTTGGGCGGTTATCGGTGAAATGAGTAGGGATGGATTTGGACCA
GACTCATTTGTATATAGTAAGGTGATTGGTGTGTATAGGGATAATGGGATGTGGAAGAAA
GCAATGGAGATTGTGAGAGAGATAAGGGAGATGGGGGTTTCACTAGACAAGAGGATTTAT
AATAGCATAATTGATACGTTTGGCAAGTGTGGTGAGTTGAGTGAGGCCTTGGAAGTGTTT
GAGAAAATGCAGGAAGAAGGCGTGAAACCGGATATAATGACATGGAATTCTTTGATTCAG
TGGCACTGCAAGGCAGGGGATGTCGGTAAAGCACTTGAGTTATTTAGTAAGATGCAAGAA
GAAGGGTTGTACCCTGACCCGAAGATCTTCATCACTATCATCAGCCGTTTAGGGGAGCAG
GGGAAGTGGGATGTGATAAAAAGGAATTTTGAGAATATGAAATGCAGAGGGCATCAAAGA
AGTGGTGCCATTTATGCCATTCTGGTTGATATTTATGGGCAGTATGGAAGATTCCAGGGC
CCGGAAGAGTGCATATCTGCTTTAAAATCGGAAGGTATTCAGCCATCAGCTAGCATGTTT
TGTGTGTTGGCAAATGCATATGCTCAACAGGGTTTATGTGAGCAAACAGTTAAGGTTCTT
CAGCTCATGGAGACAGAAGGAATTGAACCAAACCTTATAATGCTGAACATGTTGATCAAT
GCATTTGGCATTGCTGGGAGACATTTGGAGGCTCTATCAGTTTATCATCATATAAAAGAC
ACAGGTATCAGTCCTGATGTGGTCACTTACAGTACACTTATGAAGGCATGTATTAGGGCA
AGAAAGTTTGACAAGGTCCCTGAGATATATGAGGAAATGGAATCTGCTGGATGTACTCCA
GATAGGAAGGCTAGAGAGATGCTTCAAACTGCACTTTTGGTCCTGCAGCAGAGACATTGT
AAGTATTACTTCGGGTGCATATCTATGGTGTAA