Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g02250.t01
CDS Infomation

cds chromosome:12X:16:2366462:2378109:-1 gene:VIT_16s0039g02250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCATGGTTCAGGGTTTCTAGAAAAACCCTTCTCCTGCCTTGCCTGAAGAATTCACAG
AGTCCCCATTTTGGTTCTGTTTCAAGGCATATACCTGATAAATCAATTGGAGCTAACGCT
AATTATGGGCAAAACTTGGGTTGTACTAACCGGCTTCTGATGCAAAAGTGTGAATTCCAT
TCGGGATTGTTCGATAAGAGGAGACAATTTTCGCCTGTTGATTTGCGGTACTCTGGGAGA
CCCTCTTATTGTTCTGTGCTGGATTTTCGACGCCATTATGTTGTAGATGCTTCAGCAGAA
CAAGCCCGGAAATCAAAGAAAATGCTTATGTACCTTACAGCAGTAGTTTTTGCAATGGTG
GCAGGTAGTTATGCTGCGGTGCCATTGTACCAAAGGTTCTGCCAAGCTACTGGGTATGGG
GGGACAGTTCACCGCCGGGAGACTGTTGAAGAAAAGATTGCACGGCATGATGAAGATGGA
ACAGCCAGCTTAAGAGAGATTGTGGTGCAGTTCAATGCTGATGTGGCTGATGGGATGCAA
TGGAAGTTTATTCCCACACAAAGAGAGATTAGGGTCAAGCCAGGAGAAAGTGCCCTTGCA
TTTTACACAGCTGAAAACCAAAGTTCAACTCCTATAACTGGTGTATCTACATACAATGTC
ACTCCCATGAGGGCTGCCCTTTACTTCAATAAAATACAGTGCTTTTGTTTTGAGGAGCAG
AGACTTCTTCCCGGGGAGCAGATTGACATGCCTGTGTTCTTTTACATTGATCCGGAGATT
GAAAATGACCCTAAAATGGATAATGTCTACAACCTTGTCTTGTCTTATACATTTTTCAAG
TCTTCTGAGGAAAAATAA

Peptide Sequence

PEP ID

VIT_16s0039g02250.t01
PEP Infomation

pep chromosome:12X:16:2366462:2378109:-1 gene:VIT_16s0039g02250 transcript:VIT_16s0039g02250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSWFRVSRKTLLLPCLKNSQSPHFGSVSRHIPDKSIGANANYGQNLGCTNRLLMQKCEFH
SGLFDKRRQFSPVDLRYSGRPSYCSVLDFRRHYVVDASAEQARKSKKMLMYLTAVVFAMV
AGSYAAVPLYQRFCQATGYGGTVHRRETVEEKIARHDEDGTASLREIVVQFNADVADGMQ
WKFIPTQREIRVKPGESALAFYTAENQSSTPITGVSTYNVTPMRAALYFNKIQCFCFEEQ
RLLPGEQIDMPVFFYIDPEIENDPKMDNVYNLVLSYTFFKSSEEK

Transcript Sequence

Transcript ID

VIT_16s0039g02250.t01
Transcript Infomation

cdna chromosome:12X:16:2366462:2378109:-1 gene:VIT_16s0039g02250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGCAAACCAAACAGCAGGGGAAATGAGAATGCCAAGTTTAAATAGAAACCCGTCTTGACA
ATTTCGGTGGGTTCGCTTTTCTCTGCAAATTCGCTTGATCTTTGGTGATTTTCTGGGAAT
TCAAACATGTCATGGTTCAGGGTTTCTAGAAAAACCCTTCTCCTGCCTTGCCTGAAGAAT
TCACAGAGTCCCCATTTTGGTTCTGTTTCAAGGCATATACCTGATAAATCAATTGGAGCT
AACGCTAATTATGGGCAAAACTTGGGTTGTACTAACCGGCTTCTGATGCAAAAGTGTGAA
TTCCATTCGGGATTGTTCGATAAGAGGAGACAATTTTCGCCTGTTGATTTGCGGTACTCT
GGGAGACCCTCTTATTGTTCTGTGCTGGATTTTCGACGCCATTATGTTGTAGATGCTTCA
GCAGAACAAGCCCGGAAATCAAAGAAAATGCTTATGTACCTTACAGCAGTAGTTTTTGCA
ATGGTGGCAGGTAGTTATGCTGCGGTGCCATTGTACCAAAGGTTCTGCCAAGCTACTGGG
TATGGGGGGACAGTTCACCGCCGGGAGACTGTTGAAGAAAAGATTGCACGGCATGATGAA
GATGGAACAGCCAGCTTAAGAGAGATTGTGGTGCAGTTCAATGCTGATGTGGCTGATGGG
ATGCAATGGAAGTTTATTCCCACACAAAGAGAGATTAGGGTCAAGCCAGGAGAAAGTGCC
CTTGCATTTTACACAGCTGAAAACCAAAGTTCAACTCCTATAACTGGTGTATCTACATAC
AATGTCACTCCCATGAGGGCTGCCCTTTACTTCAATAAAATACAGTGCTTTTGTTTTGAG
GAGCAGAGACTTCTTCCCGGGGAGCAGATTGACATGCCTGTGTTCTTTTACATTGATCCG
GAGATTGAAAATGACCCTAAAATGGATAATGTCTACAACCTTGTCTTGTCTTATACATTT
TTCAAGTCTTCTGAGGAAAAATAAAGATGGCCCTCCCTCTTATAGAAATCTAGAGGGCTC
AGCTCAGTCAGCATACACAACTTCACAGTACTCTCTTATTAAAGCTGTAGAATTTGGCTG
CTGTAAAATTTTTTCATTGGAACTATTTTGTTATAGACCTCTTGGGATTATTGAAGGTGG
ACTAATGGAGCCTTTCTGAGACACTCGTGTTTTTCAGACAACAGAGGAGATGAGGATGCA
AATAGCTGCAATTTTCAAGCAGACGGACAACATAACTTAGGCCTTGCTCTGAAATTATGT
ATTTTCAGGCAAGCTCGGCAAAGTCAATCTTGAATTATCGAGTAAGTTACAAGCAAATGA
CTATTTTTTGAAACTATGGATATCAATTACTGGAGATGTTTGGCTTCCTATCAAAAATAA
AA