Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g01890.t01
CDS Infomation

cds chromosome:12X:16:1809110:1811815:1 gene:VIT_16s0039g01890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGAAGTCAGGGATTGTTCCTGAAGTAGTTGACAATACCAGTATGAGTAGGCATAGT
AACAATGAATCAGTTTATCAATCAAGTGGATCTGTCATTGCAAAAAGGATCACATCAAAG
GGAAAAGTTGATAATTTTGATACAACTGATCTAGAATGGACAGATAAAATTCCAGAATGT
CCTGTGTTCAAGCCATCAAAGGAGGAGTTTGAGGATCCTTTGGTTTATCTGGAAAAGATT
AGTCCAGAAGCTTCAAGATATGGGATTTGCAAGATTGTTTCCCCACTGAATGCTTCTATT
CCTGCTGGCGCGGTACTAGCTAAAGAGAACACTGGCTTCAAGTTTACTACTAGAGTGCAG
CCCCTTTGGCTTCCTGATTGGAATGTGGATGATAAGGTCATATTTTTCATGAGAGGAAGA
AATTATACACTCCATGACTTTGAAAATATGGCAAACAAGGAGTTTTCTAGTAAATATTGT
TGTTCTGGATCCCTTCCTTCCATGTATTTGGAAAAGGAATTTTGGCATGAAATAGCTTCT
GGAAGGAAAGGAACAGTCGAGTATGCAATCAACATTGATGGTAGTGCCTTTTCATGTGCT
TCCAATGATCAGCTCGGCAAAAGCAAATGGAATTTGAAGACTCTTCCACAGCTGCCCAAG
TCCCCATTGCGCCTGTGTGAAACTTCAATTCCGGGAGTAACCGATCCCATGCTTTACATT
GGTATGCTGTTTAGTATGTTTGCATGGCATGTAGAAGATCATTATTTGTACAGCATCAAC
TACCATCACTGTGGGGCACCCAAGACTTGGTATGGCGTTCCAGGTCATGCAGCTCCGGAT
TTTGAAAGGGTAGTACAGAATCATGTCTACACTGATCATATTCTACCATCAACTAAACGA
GAGGATGGAGCTTTTGCTGTTCTTGCAGAGAAAACGACGATGTTTGCTCCATGTACTTTG
CTGCAACACGATGTACCTGTTTACAAGGCTGTGCAGATGCCAGGAGAGTTTGTCATCACC
TTCCCAAAAGCATATCATGCAGGTTTCAGTCAAGGCTTTACTTGTGGCGAGGCAGTAAAC
TTTGCAGTTGGTGATTGGTTTCCATTCGGGGCAGAAGCAAGCCAGAGGTATTCACGCCTT
TGCAGGATGCCAATCATTCCTTATGAGGAACTTCTCTGCAAAGAAGCAATGCTTCTCCAT
AATTCCCAAGAACAGGGGGGCTTAGCTCATTCGTCTGCAGACTTGGCCTCCTACCATTGT
GTTAAGGTTTCCTTTATATGCCTAATACAATCCCATCACCATGCTTGCCAGTTCTTAAAG
AAAATCAAAGGATCTCCAAGTGTGTCTCCAAATTCTCAAGGAACTATACTCTGCAGCCTC
TGCAAGCGTGACTGTTATGTTGCATATATCAATTGCAATTGCTATTCGCGTCCTATTTGT
CTATTCCATGAGATTGAGGCTCTTAACTGTCCCTGTGGGAACAACCCCATTCTTTTTCTG
AGGGAGGACGTGTCGAAAATGGAAAAAATAGCTAAAAAGTTTGAGCAGGACAAAGGAATC
ATGCGAGAAGTTCATCGATACAAAGATGACAAATGCCTGCAGAAGAATGAAACAACTTTG
AAGGTCTCCAAACAGCAGGTGAAGTTTCAATGTTTTTTGTGA

Peptide Sequence

PEP ID

VIT_16s0039g01890.t01
PEP Infomation

pep chromosome:12X:16:1809110:1811815:1 gene:VIT_16s0039g01890 transcript:VIT_16s0039g01890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMKSGIVPEVVDNTSMSRHSNNESVYQSSGSVIAKRITSKGKVDNFDTTDLEWTDKIPEC
PVFKPSKEEFEDPLVYLEKISPEASRYGICKIVSPLNASIPAGAVLAKENTGFKFTTRVQ
PLWLPDWNVDDKVIFFMRGRNYTLHDFENMANKEFSSKYCCSGSLPSMYLEKEFWHEIAS
GRKGTVEYAINIDGSAFSCASNDQLGKSKWNLKTLPQLPKSPLRLCETSIPGVTDPMLYI
GMLFSMFAWHVEDHYLYSINYHHCGAPKTWYGVPGHAAPDFERVVQNHVYTDHILPSTKR
EDGAFAVLAEKTTMFAPCTLLQHDVPVYKAVQMPGEFVITFPKAYHAGFSQGFTCGEAVN
FAVGDWFPFGAEASQRYSRLCRMPIIPYEELLCKEAMLLHNSQEQGGLAHSSADLASYHC
VKVSFICLIQSHHHACQFLKKIKGSPSVSPNSQGTILCSLCKRDCYVAYINCNCYSRPIC
LFHEIEALNCPCGNNPILFLREDVSKMEKIAKKFEQDKGIMREVHRYKDDKCLQKNETTL
KVSKQQVKFQCFL

Transcript Sequence

Transcript ID

VIT_16s0039g01890.t01
Transcript Infomation

cdna chromosome:12X:16:1809110:1811815:1 gene:VIT_16s0039g01890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGAAGTCAGGGATTGTTCCTGAAGTAGTTGACAATACCAGTATGAGTAGGCATAGT
AACAATGAATCAGTTTATCAATCAAGTGGATCTGTCATTGCAAAAAGGATCACATCAAAG
GGAAAAGTTGATAATTTTGATACAACTGATCTAGAATGGACAGATAAAATTCCAGAATGT
CCTGTGTTCAAGCCATCAAAGGAGGAGTTTGAGGATCCTTTGGTTTATCTGGAAAAGATT
AGTCCAGAAGCTTCAAGATATGGGATTTGCAAGATTGTTTCCCCACTGAATGCTTCTATT
CCTGCTGGCGCGGTACTAGCTAAAGAGAACACTGGCTTCAAGTTTACTACTAGAGTGCAG
CCCCTTTGGCTTCCTGATTGGAATGTGGATGATAAGGTCATATTTTTCATGAGAGGAAGA
AATTATACACTCCATGACTTTGAAAATATGGCAAACAAGGAGTTTTCTAGTAAATATTGT
TGTTCTGGATCCCTTCCTTCCATGTATTTGGAAAAGGAATTTTGGCATGAAATAGCTTCT
GGAAGGAAAGGAACAGTCGAGTATGCAATCAACATTGATGGTAGTGCCTTTTCATGTGCT
TCCAATGATCAGCTCGGCAAAAGCAAATGGAATTTGAAGACTCTTCCACAGCTGCCCAAG
TCCCCATTGCGCCTGTGTGAAACTTCAATTCCGGGAGTAACCGATCCCATGCTTTACATT
GGTATGCTGTTTAGTATGTTTGCATGGCATGTAGAAGATCATTATTTGTACAGCATCAAC
TACCATCACTGTGGGGCACCCAAGACTTGGTATGGCGTTCCAGGTCATGCAGCTCCGGAT
TTTGAAAGGGTAGTACAGAATCATGTCTACACTGATCATATTCTACCATCAACTAAACGA
GAGGATGGAGCTTTTGCTGTTCTTGCAGAGAAAACGACGATGTTTGCTCCATGTACTTTG
CTGCAACACGATGTACCTGTTTACAAGGCTGTGCAGATGCCAGGAGAGTTTGTCATCACC
TTCCCAAAAGCATATCATGCAGGTTTCAGTCAAGGCTTTACTTGTGGCGAGGCAGTAAAC
TTTGCAGTTGGTGATTGGTTTCCATTCGGGGCAGAAGCAAGCCAGAGGTATTCACGCCTT
TGCAGGATGCCAATCATTCCTTATGAGGAACTTCTCTGCAAAGAAGCAATGCTTCTCCAT
AATTCCCAAGAACAGGGGGGCTTAGCTCATTCGTCTGCAGACTTGGCCTCCTACCATTGT
GTTAAGGTTTCCTTTATATGCCTAATACAATCCCATCACCATGCTTGCCAGTTCTTAAAG
AAAATCAAAGGATCTCCAAGTGTGTCTCCAAATTCTCAAGGAACTATACTCTGCAGCCTC
TGCAAGCGTGACTGTTATGTTGCATATATCAATTGCAATTGCTATTCGCGTCCTATTTGT
CTATTCCATGAGATTGAGGCTCTTAACTGTCCCTGTGGGAACAACCCCATTCTTTTTCTG
AGGGAGGACGTGTCGAAAATGGAAAAAATAGCTAAAAAGTTTGAGCAGGACAAAGGAATC
ATGCGAGAAGTTCATCGATACAAAGATGACAAATGCCTGCAGAAGAATGAAACAACTTTG
AAGGTCTCCAAACAGCAGGTGAAGTTTCAATGTTTTTTGTGA