Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g01870.t01
CDS Infomation

cds chromosome:12X:16:1798890:1800588:1 gene:VIT_16s0039g01870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTCGATCTTTCAAGACGGCAGATGAAATTTGGTTCTTTTCTCCATCCTCTCTCTCT
TCTGATGAAGTTGCTAATGCATTCAATTCAATACAGCAGTCTGGCAATCCATCCGAAGAT
GTATTCAACTCGTTCCAGAAGTCGGTTGATTCGACTTTCAAATGGACTGTCGTGGCTTCA
ATCTTTTCTTCTGTAGTGGTCGTTGTTGCCGTGGTTGCTGTAGTGCTGGCGCTCATAGAC
TGTTTGAAGAAGACGGGAACGGCGATTCCAAAGTTTGCTCGAATATCAAGTAAAGACGAT
GATGAACCTTTCAATAAAACTTCCATGGAAGATACACAGAAGGTACAAGACGCAGTGCCA
TCAGGTTACCCCATAATTTCAGACTCACAGCTCAAAACAGGCACCATGGAGATATTCCTT
AGTGAAATGGAACGAGAGAAGCCCACCAGGTTTTCACCTCAGCAGCTTGCTAGATTCACT
TCTGACTTCTCCATGGTACTGGGATCTGGAGGTTTTGGAGTCGTCTACAAAGGGGAGTTC
CCAAATGGTCTGCCGGTGGCCGTCAAAGTGATCAACAGCAATTCGGAGAAGAAGGTTGCA
GAGCAGTTCATGGCGGAGGTAGCCTCCATTGGAAGAACGTACCATATCAACCTGGTCAGG
CTCTATGGCTTCTGCTTCGACCCCACCATGCGAGCTCTCGTCTACGAGTATGTGGAGAAT
GGTTCCCTGGACAGGCTCTTGTTCGGTGAGAACAAGGCAACTAATGATCAATGGGGAAAG
TTTGAAGAAATTGCAGTCGGGACAGCGAAAGGAATCGCATACCTCCATGAAGAGTGTCGG
CAGAGAATCATCCACTACGATATAAAACCTGCAAATGTTCTTCTCGATGCAGTTTTCTCT
CCAAAATTGGCAGATTTCGGACTAGCAAAGCTCTGTAACAGGGACAGCACCCAGGTCCCC
GTGACGGGCTTTCGAGGGACGCCGGGATACGCCGCACCGGAGCTCTGGAAGCCGTATCCG
GTCACCTGCAAGTGTGACGTGTACAGCTTTGGTATGCTTCTATTCGAAATGGTCGGACGG
AGAAGAAACCATGACGCTAGTCTGAGCGAGACCCGACAATGGCTTCCAAGATGGACGTGG
GAAATGTTTGAGAAGAATGAATTACCAGAGATGCTGTCACTTTGTGGGATCAAAGAAACT
AACATAGAGAAAGCAGGGAGAATGTGCATGGTGGCTATGTGGTGTGTTCAGTATTTACCT
GAAGCAAGGCCTACAATGGGGAAGGTGGTGAAGATGCTGGAGGGGGAGACTGAGATTCCC
CCACCTCCATATCCATTTCAACGTTCTATGCCAAATTTGGTGTCATCAAGTGGAAATAGT
GAAGACACAGATCCTTCAGAATCTACTAGGGAAACATCAGAGCCATCTTATGCTGCTCCT
GGGGAAGGAGTATTGGAGATAGAGATAGTCAGCTAG

Peptide Sequence

PEP ID

VIT_16s0039g01870.t01
PEP Infomation

pep chromosome:12X:16:1798890:1800588:1 gene:VIT_16s0039g01870 transcript:VIT_16s0039g01870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTRSFKTADEIWFFSPSSLSSDEVANAFNSIQQSGNPSEDVFNSFQKSVDSTFKWTVVAS
IFSSVVVVVAVVAVVLALIDCLKKTGTAIPKFARISSKDDDEPFNKTSMEDTQKVQDAVP
SGYPIISDSQLKTGTMEIFLSEMEREKPTRFSPQQLARFTSDFSMVLGSGGFGVVYKGEF
PNGLPVAVKVINSNSEKKVAEQFMAEVASIGRTYHINLVRLYGFCFDPTMRALVYEYVEN
GSLDRLLFGENKATNDQWGKFEEIAVGTAKGIAYLHEECRQRIIHYDIKPANVLLDAVFS
PKLADFGLAKLCNRDSTQVPVTGFRGTPGYAAPELWKPYPVTCKCDVYSFGMLLFEMVGR
RRNHDASLSETRQWLPRWTWEMFEKNELPEMLSLCGIKETNIEKAGRMCMVAMWCVQYLP
EARPTMGKVVKMLEGETEIPPPPYPFQRSMPNLVSSSGNSEDTDPSESTRETSEPSYAAP
GEGVLEIEIVS

Transcript Sequence

Transcript ID

VIT_16s0039g01870.t01
Transcript Infomation

cdna chromosome:12X:16:1798890:1800588:1 gene:VIT_16s0039g01870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGAAACAGACCCAACGCGCAAATGAAGATGACTAAACAGAAGTGACCAGCCTTAATTTTA
TTCATCAGTTATATAATCGCCTTCTCAATTTCCTACTTCATCTTCCCCAAACCCTTCTGC
ACAGGGACCAGATGACTCGATCTTTCAAGACGGCAGATGAAATTTGGTTCTTTTCTCCAT
CCTCTCTCTCTTCTGATGAAGTTGCTAATGCATTCAATTCAATACAGCAGTCTGGCAATC
CATCCGAAGATGTATTCAACTCGTTCCAGAAGTCGGTTGATTCGACTTTCAAATGGACTG
TCGTGGCTTCAATCTTTTCTTCTGTAGTGGTCGTTGTTGCCGTGGTTGCTGTAGTGCTGG
CGCTCATAGACTGTTTGAAGAAGACGGGAACGGCGATTCCAAAGTTTGCTCGAATATCAA
GTAAAGACGATGATGAACCTTTCAATAAAACTTCCATGGAAGATACACAGAAGGTACAAG
ACGCAGTGCCATCAGGTTACCCCATAATTTCAGACTCACAGCTCAAAACAGGCACCATGG
AGATATTCCTTAGTGAAATGGAACGAGAGAAGCCCACCAGGTTTTCACCTCAGCAGCTTG
CTAGATTCACTTCTGACTTCTCCATGGTACTGGGATCTGGAGGTTTTGGAGTCGTCTACA
AAGGGGAGTTCCCAAATGGTCTGCCGGTGGCCGTCAAAGTGATCAACAGCAATTCGGAGA
AGAAGGTTGCAGAGCAGTTCATGGCGGAGGTAGCCTCCATTGGAAGAACGTACCATATCA
ACCTGGTCAGGCTCTATGGCTTCTGCTTCGACCCCACCATGCGAGCTCTCGTCTACGAGT
ATGTGGAGAATGGTTCCCTGGACAGGCTCTTGTTCGGTGAGAACAAGGCAACTAATGATC
AATGGGGAAAGTTTGAAGAAATTGCAGTCGGGACAGCGAAAGGAATCGCATACCTCCATG
AAGAGTGTCGGCAGAGAATCATCCACTACGATATAAAACCTGCAAATGTTCTTCTCGATG
CAGTTTTCTCTCCAAAATTGGCAGATTTCGGACTAGCAAAGCTCTGTAACAGGGACAGCA
CCCAGGTCCCCGTGACGGGCTTTCGAGGGACGCCGGGATACGCCGCACCGGAGCTCTGGA
AGCCGTATCCGGTCACCTGCAAGTGTGACGTGTACAGCTTTGGTATGCTTCTATTCGAAA
TGGTCGGACGGAGAAGAAACCATGACGCTAGTCTGAGCGAGACCCGACAATGGCTTCCAA
GATGGACGTGGGAAATGTTTGAGAAGAATGAATTACCAGAGATGCTGTCACTTTGTGGGA
TCAAAGAAACTAACATAGAGAAAGCAGGGAGAATGTGCATGGTGGCTATGTGGTGTGTTC
AGTATTTACCTGAAGCAAGGCCTACAATGGGGAAGGTGGTGAAGATGCTGGAGGGGGAGA
CTGAGATTCCCCCACCTCCATATCCATTTCAACGTTCTATGCCAAATTTGGTGTCATCAA
GTGGAAATAGTGAAGACACAGATCCTTCAGAATCTACTAGGGAAACATCAGAGCCATCTT
ATGCTGCTCCTGGGGAAGGAGTATTGGAGATAGAGATAGTCAGCTAG