Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g01780.t01
CDS Infomation

cds chromosome:12X:16:1706818:1713263:1 gene:VIT_16s0039g01780 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA replication complex GINS protein PSF2 [Source:UniProtKB/TrEMBL;Acc:D7T7M5]
Sequence

ATGGCCGGTCAATCTGATCCTTACATATCCCTCTTTTCTGCCCAGGAGGTGGAATTTCTT
GGCGAAGATGAAATGGTGGAGATTGTTCCCAATATGAGAATGGATCCCCTGAATTTGATC
TGTGGGGATTTTGGGCCTTTCAGGCCACAAATAGCTACTCAAGTTCCGTTGTGGCTTGCA
GTGGCTTTGAAGAAACGAGGGAAATGCACCATTCGGCCCCCTGAATGGATGTCAGTTGAT
AAGTTGACACAGGTTTTGGAAGCAGAGCGAAACTCTCTAAGAGAATTTCAGCCACTTCCA
TTCCATTATGTTGAAATCGCAAGACTTCTTTCTGACCATGCACGTGATGACATTCCTGAT
GTTTATATGGTAAGGTCTCTCATTGAAGACATCAGGAATGTAAGGTTTCATAAAGTTGAG
ACTGGGTTAGAGACAATCCATGAGCGCACACATGCAGTGAAGCTTAAAAATTTATCTGCG
ATGGAAGCAAATATAGTGCGCCCATTTGTTGTGAGAGCCCTGCAGGCATTTTATAAGCAC
GATAGTCCAGAGATGATACCACAACCAGATACCACGGCTATTAGAAGGCGGCAAGTAGCT
GATCGTGGACCAAAACGGGATCGACGATACTAA

Peptide Sequence

PEP ID

VIT_16s0039g01780.t01
PEP Infomation

pep chromosome:12X:16:1706818:1713263:1 gene:VIT_16s0039g01780 transcript:VIT_16s0039g01780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA replication complex GINS protein PSF2 [Source:UniProtKB/TrEMBL;Acc:D7T7M5]
Sequence

MAGQSDPYISLFSAQEVEFLGEDEMVEIVPNMRMDPLNLICGDFGPFRPQIATQVPLWLA
VALKKRGKCTIRPPEWMSVDKLTQVLEAERNSLREFQPLPFHYVEIARLLSDHARDDIPD
VYMVRSLIEDIRNVRFHKVETGLETIHERTHAVKLKNLSAMEANIVRPFVVRALQAFYKH
DSPEMIPQPDTTAIRRRQVADRGPKRDRRY

Transcript Sequence

Transcript ID

VIT_16s0039g01780.t01
Transcript Infomation

cdna chromosome:12X:16:1706818:1713263:1 gene:VIT_16s0039g01780 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA replication complex GINS protein PSF2 [Source:UniProtKB/TrEMBL;Acc:D7T7M5]
Sequence

AATGGCCGGTCAATCTGATCCTTACATATCCCTCTTTTCTGCCCAGGAGGTGGAATTTCT
TGGCGAAGATGAAATGGTGGAGATTGTTCCCAATATGAGAATGGATCCCCTGAATTTGAT
CTGTGGGGATTTTGGGCCTTTCAGGCCACAAATAGCTACTCAAGTTCCGTTGTGGCTTGC
AGTGGCTTTGAAGAAACGAGGGAAATGCACCATTCGGCCCCCTGAATGGATGTCAGTTGA
TAAGTTGACACAGGTTTTGGAAGCAGAGCGAAACTCTCTAAGAGAATTTCAGCCACTTCC
ATTCCATTATGTTGAAATCGCAAGACTTCTTTCTGACCATGCACGTGATGACATTCCTGA
TGTTTATATGGTAAGGTCTCTCATTGAAGACATCAGGAATGTAAGGTTTCATAAAGTTGA
GACTGGGTTAGAGACAATCCATGAGCGCACACATGCAGTGAAGCTTAAAAATTTATCTGC
GATGGAAGCAAATATAGTGCGCCCATTTGTTGTGAGAGCCCTGCAGGCATTTTATAAGCA
CGATAGTCCAGAGATGATACCACAACCAGATACCACGGCTATTAGAAGGCGGCAAGTAGC
TGATCGTGGACCAAAACGGGATCGACGATACTAATATATGGACAAAGCTCTCAGAAAAAA
ATAGATGGTGCTCATTCCCAATGACCTTCCCACCCATAACAGAGTAATTTCAGCATTCTA
GGGAGAAGGTACTTGTACTCTCACCATAAACTCTTATCTGCAGAATACTTCTATAGGTTT
TACTCACGGTAGATTTGTGAAATAACTATGGCCTTTGAGTTGGTTGTCTTTTTTCTAATG
AATTATGAAGATCCAGTGAAGAGATTGAGATAACATGAAATTTTGTTTTGCATTAACA