Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g01690.t01
CDS Infomation

cds chromosome:12X:16:1304345:1316276:-1 gene:VIT_16s0039g01690 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCTCCGACGTTGAAGAAGAACTACAGGTCCACACCGGCGCTGCAGCAGTTCTAC
ACAGGCGGCCCCTTCGCCGTCGCTTCCGACGGCTCCTTCATTGTCTGCGCCTGCGACGAT
GCCATCAAAATCGTGGACTCCTCCAATGCTTCAATCAGGTCTGTCGTCGAAGGTGACTCA
CAGACCGTCACTGCTCTCGCTCTCAGTCCCGATGACAGACTGCTTTTCTCCTCGAGCCAT
AGCAGGCAGATTAGGGTTTGGGAGCTTTCATCGCTCAAGTGTATTCGCTCTTGGAAGGGG
CATGAGGGTCCTGTGATGGGCATGGCTTGTGATGCCTCTGGTGGAGTGCTTGCAACAGCA
GGAGCTGATAGGAAAGTCCTTGTATGGGATGTTGATGGGGGTTACTGCACTCATTATTTC
AAAGGCCACAAAGGGGTTGTTACTAGTATCATTTTCCATCCCGATGTGAATCGCCTTCTT
CTTGTGTCTGGAAGTGATGATGCGACTGTAAGAGTGTGGGATCTCATGAGCAAGAAGTGT
GTTGCAACCCTGGAAAGGCACTTTTCAGCAGTGACTTCTTTGGCAGTGTCTGAAGATGGA
TGGACCTTGCTCAGTGCTGGAAGAGACAAGGCAGGGCTTCACTTATTCTTTATCTTTACT
GCAGATATGGTTGTAAACTTGTGGGACCTTCATGACTATAGCTGCAAATTGACTGTCCCA
ACATATGAGGTGCTTGAAGGCGTATGTGTGATTCATTCCAAGTCTCCCTTTGCTTCATCT
CTAGATTCATACAAACGGCAGAAGGGTAGGAAGAAGAAAAGTGAGTCACCAGCAATTTAT
TTTATCACAGTTGGAGAACGTGGGACTGTTCGAATATGGAACTCTGAAGGTGCAGTTTGC
CTATTTGAGCAGCAATCCTCGGATGTCACCGTCAGCTCAGACAGTGATGACTCTAAAAGG
GGTTTCACTGCTGCCACTATCCTGCCCTTAGATCAAGGATTGCTTTGTGTGACTGTTGAT
CAACAGTTTCTTTTCTATTCTACACTGACACATTCTGAAGAGATGTTGAAGTTAATGCTG
AGTAAAAGGCTTGTAGGATATAATGAAGAGATTGTGGATATGAAGTTTCTTGGTGAGGAT
GAACAATTTCTTGCTGTTGCTACAAATCTTGAACAGGTACAAGTGTACGACCTTGCCTCC
ATGTCATGTTCCTATGTACTGTCAGGTCATACTGGCATTGTTCTCTGCCTTGACACCTGT
GTATCGAGTTCTGGAAGAACATTTGTCGTAACAGGAAGCAAGGACAACAGTGTTAGGTTA
TGGGAATCAGAAAGCAGATGTTGCATTGGTGTTGGTACAGGTCATACTGGAGCTGTTGGA
GCTGTTGCTTTTTCAAAGAAGTTGCGGAACTTCTTTGTTAGCGGTAGTAGTGACCGCACC
CTCAAGGTTTGGAGTTTGGATGGTCTGTCTGATGACACAGAACAGCCTATCAGTTTGAAG
GCAAAAGCAGTTGTAGCTGCCCACGATAAAGATATAAATTCATTGGCTGTTGCACCAAAT
GATAGTCTTGTTTGTAGTGGTTCTCAGGACCGCACTGCTTGTGTATGGAGGCTTCCTGAT
CTAGTGTCTGTGGTTGTACTTAAAGGGCATAAGAGGGGTGTTTGGTCTGTAGAGTTTTCA
CCAGTTGATCAATGTGTTATGACAGCATCTGGTGATAAAACAATAAAGATATGGGCCATA
TCTGATGGTTCATGCCTGAAAACATTTGAAGGGCATACATCAAGTGTGTTAAGAGCATCA
TTCCTTACTCGTGGAACTCAAGTTGTTTCTTGTGGTGCTGATGGTTTGGTAAAGTTATGG
ACCATTAAAACTAATGAATGCATTGCCACTTATGATCAACATGAGGACAAGGTTTGGGCC
CTGGCTGTTGGGAAGAAGACAGAAATGCTTGCAACTGGTGGCAGTGATGCTGTTGTCAAT
CTGTGGCATGACTCTACTGCTTCTGATAAAGAGGAAGCTTTCCGTAAGGAAGAGGAAGGG
GTTCTAAAAGGCCAAGAACTGGAAAATGCTTTATCGGATACTGACTACACTAAAGCAATC
CAAATTGCATTCGAACTTCGCAGACCTCACAAACTTTTTGAGTTGTTTTCCGAGCTTAGC
AGGAAGAGGGAGGCTGCAGAACAAGTAGAAAAAGCCCTTCATGCCCTTGGCAAGGAAGAA
TTCCGTCTACTGCTCGAGTATGTTCGAGAATGGAATACAAAGCCCAAGCTCTGTCATGTT
GCACAATTTGTGCTTTTCCGGGTTTTCAGCATGCTTCCTCCAACAGAGATTACTGAGATG
AGAGGCATTGGAGAACTCCTTGAAGGTATCATCCCATATTCCCAGAGGCATTTCAGCAGG
ATGGACAGACTCATAAGGGGCACATATTTGTTGGACTACACCCTAACAGGAATGTCAGTC
ATTGAACCAGAAACTGATGCCAAAGAGATCAAAGACGAGCCGGAGACATGGCCAGAAGTG
AAGGATTCAGGCGACTGGCCATCACCAGAAAATGCAGATGAAGAGCAAGAACAAACCCTA
GAAGGGCTGAAAGAGAAGGCATCTTCAAAGAAACGGAAATCGCGTAAATCCAGAGACCGT
GCACAGAAGAAAGTCAAGGAGACAGCTTACACGAAGATCTCAGCCATCTCATTACAGGCG
TAA

Peptide Sequence

PEP ID

VIT_16s0039g01690.t01
PEP Infomation

pep chromosome:12X:16:1304345:1316276:-1 gene:VIT_16s0039g01690 transcript:VIT_16s0039g01690.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASPTLKKNYRSTPALQQFYTGGPFAVASDGSFIVCACDDAIKIVDSSNASIRSVVEGDS
QTVTALALSPDDRLLFSSSHSRQIRVWELSSLKCIRSWKGHEGPVMGMACDASGGVLATA
GADRKVLVWDVDGGYCTHYFKGHKGVVTSIIFHPDVNRLLLVSGSDDATVRVWDLMSKKC
VATLERHFSAVTSLAVSEDGWTLLSAGRDKAGLHLFFIFTADMVVNLWDLHDYSCKLTVP
TYEVLEGVCVIHSKSPFASSLDSYKRQKGRKKKSESPAIYFITVGERGTVRIWNSEGAVC
LFEQQSSDVTVSSDSDDSKRGFTAATILPLDQGLLCVTVDQQFLFYSTLTHSEEMLKLML
SKRLVGYNEEIVDMKFLGEDEQFLAVATNLEQVQVYDLASMSCSYVLSGHTGIVLCLDTC
VSSSGRTFVVTGSKDNSVRLWESESRCCIGVGTGHTGAVGAVAFSKKLRNFFVSGSSDRT
LKVWSLDGLSDDTEQPISLKAKAVVAAHDKDINSLAVAPNDSLVCSGSQDRTACVWRLPD
LVSVVVLKGHKRGVWSVEFSPVDQCVMTASGDKTIKIWAISDGSCLKTFEGHTSSVLRAS
FLTRGTQVVSCGADGLVKLWTIKTNECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVN
LWHDSTASDKEEAFRKEEEGVLKGQELENALSDTDYTKAIQIAFELRRPHKLFELFSELS
RKREAAEQVEKALHALGKEEFRLLLEYVREWNTKPKLCHVAQFVLFRVFSMLPPTEITEM
RGIGELLEGIIPYSQRHFSRMDRLIRGTYLLDYTLTGMSVIEPETDAKEIKDEPETWPEV
KDSGDWPSPENADEEQEQTLEGLKEKASSKKRKSRKSRDRAQKKVKETAYTKISAISLQA

Transcript Sequence

Transcript ID

VIT_16s0039g01690.t01
Transcript Infomation

cdna chromosome:12X:16:1304345:1316276:-1 gene:VIT_16s0039g01690 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCATGGCGTCTCCGACGTTGAAGAAGAACTACAGGTCCACACCGGCGCTGCAGCAGT
TCTACACAGGCGGCCCCTTCGCCGTCGCTTCCGACGGCTCCTTCATTGTCTGCGCCTGCG
ACGATGCCATCAAAATCGTGGACTCCTCCAATGCTTCAATCAGGTCTGTCGTCGAAGGTG
ACTCACAGACCGTCACTGCTCTCGCTCTCAGTCCCGATGACAGACTGCTTTTCTCCTCGA
GCCATAGCAGGCAGATTAGGGTTTGGGAGCTTTCATCGCTCAAGTGTATTCGCTCTTGGA
AGGGGCATGAGGGTCCTGTGATGGGCATGGCTTGTGATGCCTCTGGTGGAGTGCTTGCAA
CAGCAGGAGCTGATAGGAAAGTCCTTGTATGGGATGTTGATGGGGGTTACTGCACTCATT
ATTTCAAAGGCCACAAAGGGGTTGTTACTAGTATCATTTTCCATCCCGATGTGAATCGCC
TTCTTCTTGTGTCTGGAAGTGATGATGCGACTGTAAGAGTGTGGGATCTCATGAGCAAGA
AGTGTGTTGCAACCCTGGAAAGGCACTTTTCAGCAGTGACTTCTTTGGCAGTGTCTGAAG
ATGGATGGACCTTGCTCAGTGCTGGAAGAGACAAGGCAGGGCTTCACTTATTCTTTATCT
TTACTGCAGATATGGTTGTAAACTTGTGGGACCTTCATGACTATAGCTGCAAATTGACTG
TCCCAACATATGAGGTGCTTGAAGGCGTATGTGTGATTCATTCCAAGTCTCCCTTTGCTT
CATCTCTAGATTCATACAAACGGCAGAAGGGTAGGAAGAAGAAAAGTGAGTCACCAGCAA
TTTATTTTATCACAGTTGGAGAACGTGGGACTGTTCGAATATGGAACTCTGAAGGTGCAG
TTTGCCTATTTGAGCAGCAATCCTCGGATGTCACCGTCAGCTCAGACAGTGATGACTCTA
AAAGGGGTTTCACTGCTGCCACTATCCTGCCCTTAGATCAAGGATTGCTTTGTGTGACTG
TTGATCAACAGTTTCTTTTCTATTCTACACTGACACATTCTGAAGAGATGTTGAAGTTAA
TGCTGAGTAAAAGGCTTGTAGGATATAATGAAGAGATTGTGGATATGAAGTTTCTTGGTG
AGGATGAACAATTTCTTGCTGTTGCTACAAATCTTGAACAGGTACAAGTGTACGACCTTG
CCTCCATGTCATGTTCCTATGTACTGTCAGGTCATACTGGCATTGTTCTCTGCCTTGACA
CCTGTGTATCGAGTTCTGGAAGAACATTTGTCGTAACAGGAAGCAAGGACAACAGTGTTA
GGTTATGGGAATCAGAAAGCAGATGTTGCATTGGTGTTGGTACAGGTCATACTGGAGCTG
TTGGAGCTGTTGCTTTTTCAAAGAAGTTGCGGAACTTCTTTGTTAGCGGTAGTAGTGACC
GCACCCTCAAGGTTTGGAGTTTGGATGGTCTGTCTGATGACACAGAACAGCCTATCAGTT
TGAAGGCAAAAGCAGTTGTAGCTGCCCACGATAAAGATATAAATTCATTGGCTGTTGCAC
CAAATGATAGTCTTGTTTGTAGTGGTTCTCAGGACCGCACTGCTTGTGTATGGAGGCTTC
CTGATCTAGTGTCTGTGGTTGTACTTAAAGGGCATAAGAGGGGTGTTTGGTCTGTAGAGT
TTTCACCAGTTGATCAATGTGTTATGACAGCATCTGGTGATAAAACAATAAAGATATGGG
CCATATCTGATGGTTCATGCCTGAAAACATTTGAAGGGCATACATCAAGTGTGTTAAGAG
CATCATTCCTTACTCGTGGAACTCAAGTTGTTTCTTGTGGTGCTGATGGTTTGGTAAAGT
TATGGACCATTAAAACTAATGAATGCATTGCCACTTATGATCAACATGAGGACAAGGTTT
GGGCCCTGGCTGTTGGGAAGAAGACAGAAATGCTTGCAACTGGTGGCAGTGATGCTGTTG
TCAATCTGTGGCATGACTCTACTGCTTCTGATAAAGAGGAAGCTTTCCGTAAGGAAGAGG
AAGGGGTTCTAAAAGGCCAAGAACTGGAAAATGCTTTATCGGATACTGACTACACTAAAG
CAATCCAAATTGCATTCGAACTTCGCAGACCTCACAAACTTTTTGAGTTGTTTTCCGAGC
TTAGCAGGAAGAGGGAGGCTGCAGAACAAGTAGAAAAAGCCCTTCATGCCCTTGGCAAGG
AAGAATTCCGTCTACTGCTCGAGTATGTTCGAGAATGGAATACAAAGCCCAAGCTCTGTC
ATGTTGCACAATTTGTGCTTTTCCGGGTTTTCAGCATGCTTCCTCCAACAGAGATTACTG
AGATGAGAGGCATTGGAGAACTCCTTGAAGGTATCATCCCATATTCCCAGAGGCATTTCA
GCAGGATGGACAGACTCATAAGGGGCACATATTTGTTGGACTACACCCTAACAGGAATGT
CAGTCATTGAACCAGAAACTGATGCCAAAGAGATCAAAGACGAGCCGGAGACATGGCCAG
AAGTGAAGGATTCAGGCGACTGGCCATCACCAGAAAATGCAGATGAAGAGCAAGAACAAA
CCCTAGAAGGGCTGAAAGAGAAGGCATCTTCAAAGAAACGGAAATCGCGTAAATCCAGAG
ACCGTGCACAGAAGAAAGTCAAGGAGACAGCTTACACGAAGATCTCAGCCATCTCATTAC
AGGCGTAACACATCAACAAAATGCTTCTCTTTTTCTGTTGTTTGTTTGCTAATTTATTTT
ATTTTCCATCACCAAATTTAGGGTCCTTGAATTTTTCTAGAGAAAATGCCAGTTTTGTTG
TAGAGGATGGAGGAAGAAAAGAAAGGAAACTGTACCATTGTTACGTTGTATACCAAATTT
TGATCGTTTCAGGGTATAGGGTAGTGTAAATTATG