Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g01330.t01
CDS Infomation

cds chromosome:12X:16_random:725728:728200:1 gene:VIT_16s0039g01330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGTACTTCCTTGAAACTGGTCCTCTCTCTTTCTTGCTTCCTGTTTGTTGGAATCTTT
GCAGAGGTCGATGAGTGCAAGGTATCAAGGTGCAGCCCCAATGGTCCAGCCATCCGTTTC
CCGTTCTGGCTTAGAGACCACCAGCCAGCCCACTGTGGATTCCCTGGGTTTGAGCTATCG
TGCACGGAGAAGCATCAGACCATGCTAAATCTCTCACACTCAGTGAAACTATTGGTGAAG
AAAATAAATTACAAATCTCAAGAAATTCAAGTTCATGACACAGATGATTGCCGTCTAACA
CAGTTTTCAAACCTCAGTTTACACGTCTCTCCTTTCCAATTGCAAGAAGAAAGTCAAGGA
CACTTCAGCCTACTCAATTGTACTTCAACTAAAACAGCTTATTCAGATTACTTTTACCCA
GTCCCTTGCCTCAGTGCCCCTGCCTACCAGGTTTATGCTGTTTATTCGTCATATTCCATC
GACTTCGAACTATCCTCTTGCCGCAAGATTCACAATGTTTCACTTCCAGATCATATACTT
ATGCAAGACAATATTTTTCCTCTGAATTGGGACAAACCAATGTGCAAAAGCTGTGAAGCA
GAAGGTGGGAAGTGCAGATGGAAGAAGAGTAATAGCAAGGAACCTGAAACCCAATGTGTC
AAAGGTATAACCCTTGGTTCCATTCTTCTTATTATTGGAACCGTTGCACTCCATCGTGTA
TATAGCTGGAAGAAATTAGAAAGAAACAATCAAATAAAGATTGAAAAGTTTTTGGAAGAT
TACATAGCTCTCAAGCCTACAAGATACTCTTATGCTGATATTAAGAAGATCACAAACCAC
TTCCAAGATAAATTGGGTGAAGGAGGTTATGGAACAGTGTATAAGGGAAAGCTGTCTGAT
GAAGTTCATGTTGCAGTCAAGATCCTGAACAACACCAATGGAAATGGGGAGGAGTTTCTT
AATGAAGTGGGAACCATGGGTAGAATCCACCATGTGAATGTTGTTCGCTTAGTTGGCTTC
TGTGCTGATGGATTTAGACGAGCTCTTATTTATGAGTTCTTGCCAAATGAGTCGCTAGAG
AAGTTCATATTTTCAAGAACAATTAAAAACCATTCACTTGGTTGGAAAAAGCTTCAAGAT
ATTGCTTTAGGTATTGCCAAAGGAATTGAATATCTTCACCAAGGTTGTGATCAAAGAATC
CTCCATTTTGATATCAAACCTCATAATATTTTACTTGATCACAATTTTAATCCAAAAATA
GCTGATTTTGGCCTCGCCAAATTATGTTCCAAGGAACAAAGTGCAGTTTCTATGACTACA
GCTAGGGGGACCATGGGCTATATTGCTCCAGAGATGTTATCCAGGAATTTAGGAAATGTG
TCTTACAAGTCAGATGTTTTTAGCTATGGAATGCTATTACTTGAAATGGTAGGAGGAAGG
AAGAATATTGATGTTACTGTGGATAACACTAGCCAAGTTTACTTCCCAGAATGGATTTAT
AATCATCTAGATCAAGGTGAAGAGCTGCAAATTCGAATTGATGAAGAAGGAGATACTCAA
ATAGTAAAAAAATTGACAATTATTGGACTTTGGTGTATTCAATGGTTCCCAACGGATCGT
CCTTCTATGAAGCTTGTGGTTCAAATGTTAGAAGGAGAACATAATTTATCCACGCCTCCC
AATCCTTTCACTTGCACTACTCCAACAAAAACAAATGCAAGCACATCTAAAAGATACCTT
CAACAAGAGTTAACAGTCATCTCAGAAATTGAATGA

Peptide Sequence

PEP ID

VIT_16s0039g01330.t01
PEP Infomation

pep chromosome:12X:16_random:725728:728200:1 gene:VIT_16s0039g01330 transcript:VIT_16s0039g01330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MCTSLKLVLSLSCFLFVGIFAEVDECKVSRCSPNGPAIRFPFWLRDHQPAHCGFPGFELS
CTEKHQTMLNLSHSVKLLVKKINYKSQEIQVHDTDDCRLTQFSNLSLHVSPFQLQEESQG
HFSLLNCTSTKTAYSDYFYPVPCLSAPAYQVYAVYSSYSIDFELSSCRKIHNVSLPDHIL
MQDNIFPLNWDKPMCKSCEAEGGKCRWKKSNSKEPETQCVKGITLGSILLIIGTVALHRV
YSWKKLERNNQIKIEKFLEDYIALKPTRYSYADIKKITNHFQDKLGEGGYGTVYKGKLSD
EVHVAVKILNNTNGNGEEFLNEVGTMGRIHHVNVVRLVGFCADGFRRALIYEFLPNESLE
KFIFSRTIKNHSLGWKKLQDIALGIAKGIEYLHQGCDQRILHFDIKPHNILLDHNFNPKI
ADFGLAKLCSKEQSAVSMTTARGTMGYIAPEMLSRNLGNVSYKSDVFSYGMLLLEMVGGR
KNIDVTVDNTSQVYFPEWIYNHLDQGEELQIRIDEEGDTQIVKKLTIIGLWCIQWFPTDR
PSMKLVVQMLEGEHNLSTPPNPFTCTTPTKTNASTSKRYLQQELTVISEIE

Transcript Sequence

Transcript ID

VIT_16s0039g01330.t01
Transcript Infomation

cdna chromosome:12X:16_random:725728:728200:1 gene:VIT_16s0039g01330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAGCCTTAAGTTCTAAACTGCACAGGAGGTTCAGGAGCAGTATCCGAAACTCTAAAGAT
GTGTACTTCCTTGAAACTGGTCCTCTCTCTTTCTTGCTTCCTGTTTGTTGGAATCTTTGC
AGAGGTCGATGAGTGCAAGGTATCAAGGTGCAGCCCCAATGGTCCAGCCATCCGTTTCCC
GTTCTGGCTTAGAGACCACCAGCCAGCCCACTGTGGATTCCCTGGGTTTGAGCTATCGTG
CACGGAGAAGCATCAGACCATGCTAAATCTCTCACACTCAGTGAAACTATTGGTGAAGAA
AATAAATTACAAATCTCAAGAAATTCAAGTTCATGACACAGATGATTGCCGTCTAACACA
GTTTTCAAACCTCAGTTTACACGTCTCTCCTTTCCAATTGCAAGAAGAAAGTCAAGGACA
CTTCAGCCTACTCAATTGTACTTCAACTAAAACAGCTTATTCAGATTACTTTTACCCAGT
CCCTTGCCTCAGTGCCCCTGCCTACCAGGTTTATGCTGTTTATTCGTCATATTCCATCGA
CTTCGAACTATCCTCTTGCCGCAAGATTCACAATGTTTCACTTCCAGATCATATACTTAT
GCAAGACAATATTTTTCCTCTGAATTGGGACAAACCAATGTGCAAAAGCTGTGAAGCAGA
AGGTGGGAAGTGCAGATGGAAGAAGAGTAATAGCAAGGAACCTGAAACCCAATGTGTCAA
AGGTATAACCCTTGGTTCCATTCTTCTTATTATTGGAACCGTTGCACTCCATCGTGTATA
TAGCTGGAAGAAATTAGAAAGAAACAATCAAATAAAGATTGAAAAGTTTTTGGAAGATTA
CATAGCTCTCAAGCCTACAAGATACTCTTATGCTGATATTAAGAAGATCACAAACCACTT
CCAAGATAAATTGGGTGAAGGAGGTTATGGAACAGTGTATAAGGGAAAGCTGTCTGATGA
AGTTCATGTTGCAGTCAAGATCCTGAACAACACCAATGGAAATGGGGAGGAGTTTCTTAA
TGAAGTGGGAACCATGGGTAGAATCCACCATGTGAATGTTGTTCGCTTAGTTGGCTTCTG
TGCTGATGGATTTAGACGAGCTCTTATTTATGAGTTCTTGCCAAATGAGTCGCTAGAGAA
GTTCATATTTTCAAGAACAATTAAAAACCATTCACTTGGTTGGAAAAAGCTTCAAGATAT
TGCTTTAGGTATTGCCAAAGGAATTGAATATCTTCACCAAGGTTGTGATCAAAGAATCCT
CCATTTTGATATCAAACCTCATAATATTTTACTTGATCACAATTTTAATCCAAAAATAGC
TGATTTTGGCCTCGCCAAATTATGTTCCAAGGAACAAAGTGCAGTTTCTATGACTACAGC
TAGGGGGACCATGGGCTATATTGCTCCAGAGATGTTATCCAGGAATTTAGGAAATGTGTC
TTACAAGTCAGATGTTTTTAGCTATGGAATGCTATTACTTGAAATGGTAGGAGGAAGGAA
GAATATTGATGTTACTGTGGATAACACTAGCCAAGTTTACTTCCCAGAATGGATTTATAA
TCATCTAGATCAAGGTGAAGAGCTGCAAATTCGAATTGATGAAGAAGGAGATACTCAAAT
AGTAAAAAAATTGACAATTATTGGACTTTGGTGTATTCAATGGTTCCCAACGGATCGTCC
TTCTATGAAGCTTGTGGTTCAAATGTTAGAAGGAGAACATAATTTATCCACGCCTCCCAA
TCCTTTCACTTGCACTACTCCAACAAAAACAAATGCAAGCACATCTAAAAGATACCTTCA
ACAAGAGTTAACAGTCATCTCAGAAATTGAATGAAAGATGTCATCCTGTCTTTTTCAATT
TTTAGAAGTGTGCAATTTAAATATGATGTAGTAATCCTTCATCAATGTAGGTTTATAATT
TTACTATTATCATGTACCAGCAATTTTACTACAATATTCATTTTGAGGCTCAACTTAAAA
TA