Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g01060.t01
CDS Infomation

cds chromosome:12X:16:575368:577060:-1 gene:VIT_16s0039g01060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGACATGGCTCTTCATCATCATCTCCCTCTGTGTTGCTGCTTTCCTCAAATCTCTC
TATGATTTCTTCTTCCCAAAACTGAACCTCCCACCAGGACCCACCAGGGTTCCTCTCATC
GGAAACTTCTTATTGTTCCGTAAATCCTTGGTGGACTTCGAACCAGTCATCCGAAACCTA
CACAGCAAGTACGGCCCAATCCTCACAGTCCATTTCGGCTCTCGCCCTGTCATATTCGTC
TCCTCCGATTCCCTCTCCCACCAGGCCTTGGTCCAAAAGGGCGCTGTTTTCGCTGATCGC
ACTGAGGCCCTCCCCATCAGCAAAATTTTCAGCAGTAATAAGCATACCATCAGCACCGCC
TTCTACGGCCCGACCTGGCGAGTTCTCCGCCGCAACCTCACCACCGAGATCCTCCACCCT
TCGTGGGTGAGAAGCTATGCTCATGCGCGAAAGTGGGTGCTGGGGATTCTCCTCTCTAGG
GTTACAGGCCACTCGGGACCGGTCCGGGTGGTGGATCACTTCCGGTATGCTATGTTTTAC
TTACTGGTGCTCATGTGTTTTGGGGACAAGCTCAAGGAAAATCAGATTCGAGAAATTGAG
ACGATTCAACGAAGATTGTTATTGCGTTTTCGTCGCGTCAATATCTTAAGCTTCTGGCCG
AGGTTGCGAATGCTATTGTTCCGAAAGCATTGGGAGGAGGCATTGCAGCTGCGCAAGGAT
CAGGAAGGGATTATACTTCCACACACAAGAGCCAGACAGCAGCTAAAGCAACAACTTCGA
AGCAAAGAACAAGAAGACGACAGCGACCCAGGTTCATCTTCCTCCTCAACTGAATATGTC
TTGTCGTATGTGGATACTTTGCTGGATCTGCAACTGCCGGAAGAAGAAAACAGAAAGCTT
AGTGAAGGAGAGATGGTTAGTTTGTGCTCGGAGTTTCTGAACGGCGGTACTGAAACTACA
TCCACTACACTGCAGTGGATCATGGCAAACCTGGTGAAGCACCCGCATATTCAGGCCAAG
CTTTTCGAGGAGATTAGTGGGGTTGTGGGGGAAGGAGGGGAGGAGGTGAAGAGGGAAGAT
TTGCAGAAGATGCCATACTTGAAGGCGGTGATACTGGAAGGCCTGAGGCGGCATCCTCCA
GCCCACTTTCTGTTGCCTCATTCGGTGACCCAAGATACAACCTTGGAAGGGTTTGCGATA
CCAAAAAACACTCTAGTGAATTTCATGGTAGCGGACATGGGTTGGAACCCAAAGATTTGG
GATGACCCAATGGCGTTCAAGCCGGAGAGGTTCATGAACAGCAAAGGTAATGGTGTGGAA
GCATTTGATGTAACTGGGAGGAAGGAGATCAGAATGATTCCATTCGGTGCTGGAAGGAGA
ATTTGTCCAGGGTATGAACTAGCCATTCTGCATTTGGAGTACTTTGTGGCCAATTTGGTG
TTGAATTTTGAATGGAGAGCTGTGGATGGAGATGAAGTTGACTTATCAGAGGAGCAGGGA
TTCACAGTAGAAATGAAGAATCCATTGCAGGTTCACTTGTCTCCTAGGAGGAAATAA

Peptide Sequence

PEP ID

VIT_16s0039g01060.t01
PEP Infomation

pep chromosome:12X:16:575368:577060:-1 gene:VIT_16s0039g01060 transcript:VIT_16s0039g01060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

METWLFIIISLCVAAFLKSLYDFFFPKLNLPPGPTRVPLIGNFLLFRKSLVDFEPVIRNL
HSKYGPILTVHFGSRPVIFVSSDSLSHQALVQKGAVFADRTEALPISKIFSSNKHTISTA
FYGPTWRVLRRNLTTEILHPSWVRSYAHARKWVLGILLSRVTGHSGPVRVVDHFRYAMFY
LLVLMCFGDKLKENQIREIETIQRRLLLRFRRVNILSFWPRLRMLLFRKHWEEALQLRKD
QEGIILPHTRARQQLKQQLRSKEQEDDSDPGSSSSSTEYVLSYVDTLLDLQLPEEENRKL
SEGEMVSLCSEFLNGGTETTSTTLQWIMANLVKHPHIQAKLFEEISGVVGEGGEEVKRED
LQKMPYLKAVILEGLRRHPPAHFLLPHSVTQDTTLEGFAIPKNTLVNFMVADMGWNPKIW
DDPMAFKPERFMNSKGNGVEAFDVTGRKEIRMIPFGAGRRICPGYELAILHLEYFVANLV
LNFEWRAVDGDEVDLSEEQGFTVEMKNPLQVHLSPRRK

Transcript Sequence

Transcript ID

VIT_16s0039g01060.t01
Transcript Infomation

cdna chromosome:12X:16:575368:577060:-1 gene:VIT_16s0039g01060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCCAGAAGAGAGAATCAAGAATTTGATGACCAAAATGGAGACATGGCTCTTCATCATCA
TCTCCCTCTGTGTTGCTGCTTTCCTCAAATCTCTCTATGATTTCTTCTTCCCAAAACTGA
ACCTCCCACCAGGACCCACCAGGGTTCCTCTCATCGGAAACTTCTTATTGTTCCGTAAAT
CCTTGGTGGACTTCGAACCAGTCATCCGAAACCTACACAGCAAGTACGGCCCAATCCTCA
CAGTCCATTTCGGCTCTCGCCCTGTCATATTCGTCTCCTCCGATTCCCTCTCCCACCAGG
CCTTGGTCCAAAAGGGCGCTGTTTTCGCTGATCGCACTGAGGCCCTCCCCATCAGCAAAA
TTTTCAGCAGTAATAAGCATACCATCAGCACCGCCTTCTACGGCCCGACCTGGCGAGTTC
TCCGCCGCAACCTCACCACCGAGATCCTCCACCCTTCGTGGGTGAGAAGCTATGCTCATG
CGCGAAAGTGGGTGCTGGGGATTCTCCTCTCTAGGGTTACAGGCCACTCGGGACCGGTCC
GGGTGGTGGATCACTTCCGGTATGCTATGTTTTACTTACTGGTGCTCATGTGTTTTGGGG
ACAAGCTCAAGGAAAATCAGATTCGAGAAATTGAGACGATTCAACGAAGATTGTTATTGC
GTTTTCGTCGCGTCAATATCTTAAGCTTCTGGCCGAGGTTGCGAATGCTATTGTTCCGAA
AGCATTGGGAGGAGGCATTGCAGCTGCGCAAGGATCAGGAAGGGATTATACTTCCACACA
CAAGAGCCAGACAGCAGCTAAAGCAACAACTTCGAAGCAAAGAACAAGAAGACGACAGCG
ACCCAGGTTCATCTTCCTCCTCAACTGAATATGTCTTGTCGTATGTGGATACTTTGCTGG
ATCTGCAACTGCCGGAAGAAGAAAACAGAAAGCTTAGTGAAGGAGAGATGGTTAGTTTGT
GCTCGGAGTTTCTGAACGGCGGTACTGAAACTACATCCACTACACTGCAGTGGATCATGG
CAAACCTGGTGAAGCACCCGCATATTCAGGCCAAGCTTTTCGAGGAGATTAGTGGGGTTG
TGGGGGAAGGAGGGGAGGAGGTGAAGAGGGAAGATTTGCAGAAGATGCCATACTTGAAGG
CGGTGATACTGGAAGGCCTGAGGCGGCATCCTCCAGCCCACTTTCTGTTGCCTCATTCGG
TGACCCAAGATACAACCTTGGAAGGGTTTGCGATACCAAAAAACACTCTAGTGAATTTCA
TGGTAGCGGACATGGGTTGGAACCCAAAGATTTGGGATGACCCAATGGCGTTCAAGCCGG
AGAGGTTCATGAACAGCAAAGGTAATGGTGTGGAAGCATTTGATGTAACTGGGAGGAAGG
AGATCAGAATGATTCCATTCGGTGCTGGAAGGAGAATTTGTCCAGGGTATGAACTAGCCA
TTCTGCATTTGGAGTACTTTGTGGCCAATTTGGTGTTGAATTTTGAATGGAGAGCTGTGG
ATGGAGATGAAGTTGACTTATCAGAGGAGCAGGGATTCACAGTAGAAATGAAGAATCCAT
TGCAGGTTCACTTGTCTCCTAGGAGGAAATAAAATTAATCGAAGTGTTAAGGACTAGGAA
GGGTGTTTGATAAATCAACCGTATTGACTTAAGGTAATTTAATAATTTAATGACTTTGGT
GACATTTGTTTTT