Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g00870.t01
CDS Infomation

cds chromosome:12X:16:484963:486636:1 gene:VIT_16s0039g00870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTTGATCAGCAAGAAATGGAGATATGGGTCTTCCTCTTGACACGGGTCTTCCAA
TTGATACGGGTTTTCCTCTTGATATGGGTCTTCCTCTTGATATGGGTCTTCCTCTTCATC
GTCTCCCTTTGTATTGCTTCTCTCCTCAAATCTCTCCATGATTTCTTCTTCCCAAAGATC
AATCTCCCACCAGGACCCGCCGCCTTTCCTCTCATCGGAAACCTCCTCTGGCTCGGCACA
TCCTTCTCCGAACTCGAACCCATCCTCCGAAATTTACACGGCAAGTACGGCCCAATCTTC
ACTGTCCGAATCCGCTCTCGCCCGGCCATCTTCATCTCCTCCAACTCCCTCGCCCACCAG
GCCTTGGTCCAAAACGGAGTCATTTTCTCCGACCGTCCTGCGGCGCTTCCGGCCAGTAGA
GTCATGAGCAGTAACCAACGAAACATCAATTCCTGTCCCTATGGCCAGACCTGGCGTCTC
CTACGCCGCAACCTCACGGCCGAGATTCTCCACCCTTCCCGGGTGAGAAGCTACTCCAAC
GCACGGAAGTGGGTGCTGGATATTCTGGTCTCTCGGCTTAGAAGCCACTCCGACGGATTT
GTCCCCGTCCGAGTAATGGATCACTTTCAATATGCCATGTTTTGCCTACTGGTACTCATG
TGTTTCGGGGACAAGCTCGAGGAGAAGCAAATTCAGGAGATTGAGATGATTCATCGAAGG
TTGTTGTTGGTGTTCCGTCGATTCAATAGGCTCGATTTGTTGCCGAGGATGGGTAAGGTA
TTATTTCGAAAAAGGTGGGAGGAGTTGCTCAATTTGCGCAAGGATCAAGATGCGATTCTG
CTGCCGCACATAAGAGCCAGACAGTGGTTAAAGCAGGAAACGCAAAGCAAACGAGAAGAA
GACAATGGCAACCCGGTTTCATCTTCATCCTCAAAGGACTATGTCTTGTCGTACGTCGAT
ACTTTGCTGGATCTGCAGTTGCCGGAAGAGAAGAGGAAGCTTAATGAAGGAGAGATGGTG
ACGCTGTGCTCGGAGTTTCTCAGTGCCGGAACTGACACTACCTCCACTGCACTGCAGTGG
ATCATGGCGAACCTGGTGAAGTCCCCCCATATTCAGGCCAGGCTTTTCGAGGAGATTAGT
GGGGTTGTGGGCGAAGACGAGGAGGAGGTGAAGGAGGAGGATTTGCTGAAGATGCCATAC
TTGAAGAAAGTGGTCTTGGAAGGGTTGAGGCGGCATCCTCCGGGACACTTTGTGTTGCCT
CATTCAGTGACCCAAGATGTAAGCTTTGAAGGGTATGACATACCCAAGAACGCAACTGTG
AATTTCATGATATCAGAGATGAATTGGAACCCAACGATTTGGGAAAACCCAATGGAGTTC
AAGCCAGAGAGGTTCTTGAACAACAATGGAGATGGAGACCATGGAGTTGAAGGGGAAGCA
TTTGATATAACTGGGAGCAGAGAGATAAAGATGATGCCATTTGGTGCAGGGAGGAGGATA
TGTCCCGGGTATGGGTTGGCAATGCTGCTTTTGGAGTATTTTGTGGGGAATTTGGTGTGG
AATTTTGAATGGAAGGCAGTGGAGGGAGATGAAGTTGATCTATCTGAGAAGATGGAGTTC
ACAGTAGTAATGAAGAATCCATTGCAGGCTCGCTTATCTCCGAGGTTGAAATAG

Peptide Sequence

PEP ID

VIT_16s0039g00870.t01
PEP Infomation

pep chromosome:12X:16:484963:486636:1 gene:VIT_16s0039g00870 transcript:VIT_16s0039g00870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDFDQQEMEIWVFLLTRVFQLIRVFLLIWVFLLIWVFLFIVSLCIASLLKSLHDFFFPKI
NLPPGPAAFPLIGNLLWLGTSFSELEPILRNLHGKYGPIFTVRIRSRPAIFISSNSLAHQ
ALVQNGVIFSDRPAALPASRVMSSNQRNINSCPYGQTWRLLRRNLTAEILHPSRVRSYSN
ARKWVLDILVSRLRSHSDGFVPVRVMDHFQYAMFCLLVLMCFGDKLEEKQIQEIEMIHRR
LLLVFRRFNRLDLLPRMGKVLFRKRWEELLNLRKDQDAILLPHIRARQWLKQETQSKREE
DNGNPVSSSSSKDYVLSYVDTLLDLQLPEEKRKLNEGEMVTLCSEFLSAGTDTTSTALQW
IMANLVKSPHIQARLFEEISGVVGEDEEEVKEEDLLKMPYLKKVVLEGLRRHPPGHFVLP
HSVTQDVSFEGYDIPKNATVNFMISEMNWNPTIWENPMEFKPERFLNNNGDGDHGVEGEA
FDITGSREIKMMPFGAGRRICPGYGLAMLLLEYFVGNLVWNFEWKAVEGDEVDLSEKMEF
TVVMKNPLQARLSPRLK

Transcript Sequence

Transcript ID

VIT_16s0039g00870.t01
Transcript Infomation

cdna chromosome:12X:16:484963:486636:1 gene:VIT_16s0039g00870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTTGATCAGCAAGAAATGGAGATATGGGTCTTCCTCTTGACACGGGTCTTCCAA
TTGATACGGGTTTTCCTCTTGATATGGGTCTTCCTCTTGATATGGGTCTTCCTCTTCATC
GTCTCCCTTTGTATTGCTTCTCTCCTCAAATCTCTCCATGATTTCTTCTTCCCAAAGATC
AATCTCCCACCAGGACCCGCCGCCTTTCCTCTCATCGGAAACCTCCTCTGGCTCGGCACA
TCCTTCTCCGAACTCGAACCCATCCTCCGAAATTTACACGGCAAGTACGGCCCAATCTTC
ACTGTCCGAATCCGCTCTCGCCCGGCCATCTTCATCTCCTCCAACTCCCTCGCCCACCAG
GCCTTGGTCCAAAACGGAGTCATTTTCTCCGACCGTCCTGCGGCGCTTCCGGCCAGTAGA
GTCATGAGCAGTAACCAACGAAACATCAATTCCTGTCCCTATGGCCAGACCTGGCGTCTC
CTACGCCGCAACCTCACGGCCGAGATTCTCCACCCTTCCCGGGTGAGAAGCTACTCCAAC
GCACGGAAGTGGGTGCTGGATATTCTGGTCTCTCGGCTTAGAAGCCACTCCGACGGATTT
GTCCCCGTCCGAGTAATGGATCACTTTCAATATGCCATGTTTTGCCTACTGGTACTCATG
TGTTTCGGGGACAAGCTCGAGGAGAAGCAAATTCAGGAGATTGAGATGATTCATCGAAGG
TTGTTGTTGGTGTTCCGTCGATTCAATAGGCTCGATTTGTTGCCGAGGATGGGTAAGGTA
TTATTTCGAAAAAGGTGGGAGGAGTTGCTCAATTTGCGCAAGGATCAAGATGCGATTCTG
CTGCCGCACATAAGAGCCAGACAGTGGTTAAAGCAGGAAACGCAAAGCAAACGAGAAGAA
GACAATGGCAACCCGGTTTCATCTTCATCCTCAAAGGACTATGTCTTGTCGTACGTCGAT
ACTTTGCTGGATCTGCAGTTGCCGGAAGAGAAGAGGAAGCTTAATGAAGGAGAGATGGTG
ACGCTGTGCTCGGAGTTTCTCAGTGCCGGAACTGACACTACCTCCACTGCACTGCAGTGG
ATCATGGCGAACCTGGTGAAGTCCCCCCATATTCAGGCCAGGCTTTTCGAGGAGATTAGT
GGGGTTGTGGGCGAAGACGAGGAGGAGGTGAAGGAGGAGGATTTGCTGAAGATGCCATAC
TTGAAGAAAGTGGTCTTGGAAGGGTTGAGGCGGCATCCTCCGGGACACTTTGTGTTGCCT
CATTCAGTGACCCAAGATGTAAGCTTTGAAGGGTATGACATACCCAAGAACGCAACTGTG
AATTTCATGATATCAGAGATGAATTGGAACCCAACGATTTGGGAAAACCCAATGGAGTTC
AAGCCAGAGAGGTTCTTGAACAACAATGGAGATGGAGACCATGGAGTTGAAGGGGAAGCA
TTTGATATAACTGGGAGCAGAGAGATAAAGATGATGCCATTTGGTGCAGGGAGGAGGATA
TGTCCCGGGTATGGGTTGGCAATGCTGCTTTTGGAGTATTTTGTGGGGAATTTGGTGTGG
AATTTTGAATGGAAGGCAGTGGAGGGAGATGAAGTTGATCTATCTGAGAAGATGGAGTTC
ACAGTAGTAATGAAGAATCCATTGCAGGCTCGCTTATCTCCGAGGTTGAAATAG