Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g00690.t01
CDS Infomation

cds chromosome:12X:16:341722:344560:-1 gene:VIT_16s0039g00690 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGAGTATCAAGAGATGGAGAGCTTTGGCATGGACAACGACTTCGAAGACGGTCAA
TGGATCAACGGCGAATTCTACTACCGTAAGCGCAGGGACAAGCGCCACCAGACCAAAGAC
GACGTCCTCTATGGTGTATTCGCCGACTCCGATTCCGACGACTCTTCCTCTGCCAAGAAG
CGCCGTAAGGACCTCTCCAACAAGACCGATTTCACCAAGCCCGTCAATTTCGTCTCCACC
GGCGTCGTCATGCCCACCCAAGAAATCGAACGTAATTCCAGGGAGCAAGTCAACGAAGAC
GACGGCGGCAGCGGCGGCGACAGGCCCGGTTTGGGCCTCGGTTCTACCAATTTCGGTTCA
GGTATAGGCTTTACTTCCAATTCCGGTTCGTTTTCGAAAAATGTTGGCAATAACGAAGTA
GATGAACATGATAACGATGATGATGGTTTCCTTCCCACTGCGTTCGGAAGGAAGATTAAG
GAGGGTGCCCAGCGGCGGGAGAGAGAGAGGGAGAAGTCGAAATTAGTTAAGAAATCTCAA
GGAGGGAGAAGAGAGGCTGAATTGGGGGATGTCGGACGATTTGAGAAGTTTACGAAAGGG
ATTGGGATGAAATTGATGGAGAAAATGGGTTACACAGGAGGTGGTCTGGGGAAAAATGAG
CAAGGGATTGTTGCTCCGATTGAGGCTAAGTTACGACCCAAGAATATGGGGATGGGTTTT
AACGATTACAAGGAGACGAAATTGCCTGCATTGCAAGAACCTGAGGAGAAGAAATCGTTG
CCTGGGACCACGCAGGCTGTGAATAAGAGTAAAGGGAAGCTCTGGACGAAGCAAGCCAGC
GGGAAGAAAAAGGACAGATACATTACAGCTGAGGAGTTGCTTGTGAAGAAGCAAGAGCAG
GGTATTGAAGTTGTTCAGAAGGTGTTTGACATGAGGGGGCCCCAGGTTCGCGTTTTGACG
AATCTGGAGGATTTGAATGCTGAGGAGAAAGCCAGGGAAAATGATATACCAATGCCTGAA
CTTCAGCATAATGTGAAGTTGATTGTGAACTTAGCTGAGCTTGATATACAGAAGTTGGAC
AGGGATTTGAGGAATGAGAGAGAGACAGTGGTGAGCTTGCAGATGGAGAAGGAGAAGTTA
CAAAAAGAGGCAGCTCATCAGAAGACACAGTTGGATAATACAGAACAAATAGTTAGTGTA
TTGGACATAATAAGTGAGGAGAATTCAGTAGGAAAATTGACATTGGATTCACTTGCAAAG
TATTTTGGTGATTTACGAAGGAGATTTGCCGAAGATTACAAACTTTGTAATCTGTCATGC
ATTGCTTGCTCATTTGCTCTCCCTTTACTTATTAGAGTGTTCCAGGGATGGGATCCCCTT
CAAAATCCATTGCATGGCTTGGAAGTGATGTCCTCATGGAAAAATCTATTGCAAGGAGGG
GACGATATTTTTGATCTCTCTGATGTGGGATCACCTTATACACAGTTGGTTATGGAAGTT
GTTTTACCTGCTGTAAGAATATCTGGAATCAACACTTGGCAAGCCAGGGACCCTGAACCG
ATGCTTCGCTTTTTGGAGTCATGGGAAAAATTGCTTCCTTCCTCAGTCCTTCAAACCATG
CTTGACAACATTGTTTTGCCTAAATTATCTTCTGCTGTAGATGTGTGGGACCCACGTAGG
GAAACCGTTCCAATCCATGTTTGGGTGCATCCATGGCTACCACTGTTGGGTCAGAAGTTG
GAGAGTTTATATTGGAAGATATGTGATAAATTGGGCAATGCTCTTCAAGCATGGCATCCT
AGTGATGGGTCTGCTTACACTATCCTGTCACCTTGGAAGACAGTTTTTGACTCTACAAGT
TGGGAGAGACTTATGGTTCGATCAATAATTCCGAAATTGATGAATGTCCTGCAAGAATTT
CAAGTAAACCCAGCAAGTCAGAACCTCGATCAGTTCCATTGGGTCATGTCTTGGGCTTCT
GTAATTCCAATTCATCGCATGGTTGAATTGTTGGAACTTCATTTCTTCCCAAAGTGGCAG
CAGGTTTTGTACCATTGGTTGTGTTCAGGCCCAAACTTTGAAGAGGTTACACAATGGTAT
TTGGGTTGGAAGGGACTCTTGCCCCAAGAACTTCTTGCCAATGAACAGATCCGCTATCAG
CTTAATATTGGTCTTGACATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCT
GGTTTGCGAGAGAACATTAGCTATCTTCGGGTGCTTGAACAACGGCAGTTTGAGGCTCAG
CAGAAAGCAGCTGCAGATGCTCGACAGCAAGCTGCCGCGAGTCTGGGTGGCACAACCCAG
ATGGATGGCATTGGAGGTGTGCTTGAGATGAGTTTGAAAGAAGTTATTGAGGCACATGCA
CAACAGCATGAATTGCTGTTTAAGCCTAAACCTGGCAGAATGTATAATGGTCACCAGATA
TATGGCTTTGGTAACATAAGCATAATAGTGGACTCTCTAAATCAAAAGGTATTTGCCCAA
CATGAAGAAAGATGGTCCTTGGTAACCCTGGAGCAGTTGCTGGAGATGCACAAGAATTCT
ATTTTGAAGTGA

Peptide Sequence

PEP ID

VIT_16s0039g00690.t01
PEP Infomation

pep chromosome:12X:16:341722:344560:-1 gene:VIT_16s0039g00690 transcript:VIT_16s0039g00690.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDEYQEMESFGMDNDFEDGQWINGEFYYRKRRDKRHQTKDDVLYGVFADSDSDDSSSAKK
RRKDLSNKTDFTKPVNFVSTGVVMPTQEIERNSREQVNEDDGGSGGDRPGLGLGSTNFGS
GIGFTSNSGSFSKNVGNNEVDEHDNDDDGFLPTAFGRKIKEGAQRREREREKSKLVKKSQ
GGRREAELGDVGRFEKFTKGIGMKLMEKMGYTGGGLGKNEQGIVAPIEAKLRPKNMGMGF
NDYKETKLPALQEPEEKKSLPGTTQAVNKSKGKLWTKQASGKKKDRYITAEELLVKKQEQ
GIEVVQKVFDMRGPQVRVLTNLEDLNAEEKARENDIPMPELQHNVKLIVNLAELDIQKLD
RDLRNERETVVSLQMEKEKLQKEAAHQKTQLDNTEQIVSVLDIISEENSVGKLTLDSLAK
YFGDLRRRFAEDYKLCNLSCIACSFALPLLIRVFQGWDPLQNPLHGLEVMSSWKNLLQGG
DDIFDLSDVGSPYTQLVMEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLQTM
LDNIVLPKLSSAVDVWDPRRETVPIHVWVHPWLPLLGQKLESLYWKICDKLGNALQAWHP
SDGSAYTILSPWKTVFDSTSWERLMVRSIIPKLMNVLQEFQVNPASQNLDQFHWVMSWAS
VIPIHRMVELLELHFFPKWQQVLYHWLCSGPNFEEVTQWYLGWKGLLPQELLANEQIRYQ
LNIGLDMMNQAVEGMEVVQPGLRENISYLRVLEQRQFEAQQKAAADARQQAAASLGGTTQ
MDGIGGVLEMSLKEVIEAHAQQHELLFKPKPGRMYNGHQIYGFGNISIIVDSLNQKVFAQ
HEERWSLVTLEQLLEMHKNSILK

Transcript Sequence

Transcript ID

VIT_16s0039g00690.t01
Transcript Infomation

cdna chromosome:12X:16:341722:344560:-1 gene:VIT_16s0039g00690 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GACTCCGATTTTTCCTCAGTTAGGGTTAGGGTTTGTTTCCAAAGATGGATGAGTATCAAG
AGATGGAGAGCTTTGGCATGGACAACGACTTCGAAGACGGTCAATGGATCAACGGCGAAT
TCTACTACCGTAAGCGCAGGGACAAGCGCCACCAGACCAAAGACGACGTCCTCTATGGTG
TATTCGCCGACTCCGATTCCGACGACTCTTCCTCTGCCAAGAAGCGCCGTAAGGACCTCT
CCAACAAGACCGATTTCACCAAGCCCGTCAATTTCGTCTCCACCGGCGTCGTCATGCCCA
CCCAAGAAATCGAACGTAATTCCAGGGAGCAAGTCAACGAAGACGACGGCGGCAGCGGCG
GCGACAGGCCCGGTTTGGGCCTCGGTTCTACCAATTTCGGTTCAGGTATAGGCTTTACTT
CCAATTCCGGTTCGTTTTCGAAAAATGTTGGCAATAACGAAGTAGATGAACATGATAACG
ATGATGATGGTTTCCTTCCCACTGCGTTCGGAAGGAAGATTAAGGAGGGTGCCCAGCGGC
GGGAGAGAGAGAGGGAGAAGTCGAAATTAGTTAAGAAATCTCAAGGAGGGAGAAGAGAGG
CTGAATTGGGGGATGTCGGACGATTTGAGAAGTTTACGAAAGGGATTGGGATGAAATTGA
TGGAGAAAATGGGTTACACAGGAGGTGGTCTGGGGAAAAATGAGCAAGGGATTGTTGCTC
CGATTGAGGCTAAGTTACGACCCAAGAATATGGGGATGGGTTTTAACGATTACAAGGAGA
CGAAATTGCCTGCATTGCAAGAACCTGAGGAGAAGAAATCGTTGCCTGGGACCACGCAGG
CTGTGAATAAGAGTAAAGGGAAGCTCTGGACGAAGCAAGCCAGCGGGAAGAAAAAGGACA
GATACATTACAGCTGAGGAGTTGCTTGTGAAGAAGCAAGAGCAGGGTATTGAAGTTGTTC
AGAAGGTGTTTGACATGAGGGGGCCCCAGGTTCGCGTTTTGACGAATCTGGAGGATTTGA
ATGCTGAGGAGAAAGCCAGGGAAAATGATATACCAATGCCTGAACTTCAGCATAATGTGA
AGTTGATTGTGAACTTAGCTGAGCTTGATATACAGAAGTTGGACAGGGATTTGAGGAATG
AGAGAGAGACAGTGGTGAGCTTGCAGATGGAGAAGGAGAAGTTACAAAAAGAGGCAGCTC
ATCAGAAGACACAGTTGGATAATACAGAACAAATAGTTAGTGTATTGGACATAATAAGTG
AGGAGAATTCAGTAGGAAAATTGACATTGGATTCACTTGCAAAGTATTTTGGTGATTTAC
GAAGGAGATTTGCCGAAGATTACAAACTTTGTAATCTGTCATGCATTGCTTGCTCATTTG
CTCTCCCTTTACTTATTAGAGTGTTCCAGGGATGGGATCCCCTTCAAAATCCATTGCATG
GCTTGGAAGTGATGTCCTCATGGAAAAATCTATTGCAAGGAGGGGACGATATTTTTGATC
TCTCTGATGTGGGATCACCTTATACACAGTTGGTTATGGAAGTTGTTTTACCTGCTGTAA
GAATATCTGGAATCAACACTTGGCAAGCCAGGGACCCTGAACCGATGCTTCGCTTTTTGG
AGTCATGGGAAAAATTGCTTCCTTCCTCAGTCCTTCAAACCATGCTTGACAACATTGTTT
TGCCTAAATTATCTTCTGCTGTAGATGTGTGGGACCCACGTAGGGAAACCGTTCCAATCC
ATGTTTGGGTGCATCCATGGCTACCACTGTTGGGTCAGAAGTTGGAGAGTTTATATTGGA
AGATATGTGATAAATTGGGCAATGCTCTTCAAGCATGGCATCCTAGTGATGGGTCTGCTT
ACACTATCCTGTCACCTTGGAAGACAGTTTTTGACTCTACAAGTTGGGAGAGACTTATGG
TTCGATCAATAATTCCGAAATTGATGAATGTCCTGCAAGAATTTCAAGTAAACCCAGCAA
GTCAGAACCTCGATCAGTTCCATTGGGTCATGTCTTGGGCTTCTGTAATTCCAATTCATC
GCATGGTTGAATTGTTGGAACTTCATTTCTTCCCAAAGTGGCAGCAGGTTTTGTACCATT
GGTTGTGTTCAGGCCCAAACTTTGAAGAGGTTACACAATGGTATTTGGGTTGGAAGGGAC
TCTTGCCCCAAGAACTTCTTGCCAATGAACAGATCCGCTATCAGCTTAATATTGGTCTTG
ACATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTGCGAGAGAACA
TTAGCTATCTTCGGGTGCTTGAACAACGGCAGTTTGAGGCTCAGCAGAAAGCAGCTGCAG
ATGCTCGACAGCAAGCTGCCGCGAGTCTGGGTGGCACAACCCAGATGGATGGCATTGGAG
GTGTGCTTGAGATGAGTTTGAAAGAAGTTATTGAGGCACATGCACAACAGCATGAATTGC
TGTTTAAGCCTAAACCTGGCAGAATGTATAATGGTCACCAGATATATGGCTTTGGTAACA
TAAGCATAATAGTGGACTCTCTAAATCAAAAGGTATTTGCCCAACATGAAGAAAGATGGT
CCTTGGTAACCCTGGAGCAGTTGCTGGAGATGCACAAGAATTCTATTTTGAAGTGACATG
GAGTTTAGGTGTTTTTTTGAAGAGTTCTTGGATGCAAAGTGGCTCTAGGGTGGCACTGTG
GCAGCATTTCAGGTTGCCTTGTTTGTAGCCATTATGCATAAATGCAATGAGAGAAAAACA
AAATATTTTTGAAGTAAAACTTCTAGGTTATTGGGTTTCTGTTGTAAATTTCAACAATGG
GAATGCTTGTTATTTGATT