Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g00570.t01
CDS Infomation

cds chromosome:12X:16:283917:286597:-1 gene:VIT_16s0039g00570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCACCACCACCTTCTCTAGTCTTCTCAGTGCGAAGGAGCAAGCCAGAACTGGTGGCT
CCGGCCAAGCCCACGCCCCACGAGTTCAAACCCCTGTCGGACATCGATGACCAGGAGGGT
CTCCGTTTCCAAATCCCTGTCATACAGTTCTACAAAAAGGTCCCCTCCATGCATGGGAGG
GACCCTGCCAAGGTGATCAAAGACGCGGTGGCTAGAGCGCTGGTCTTCTACTACCCCTTT
GCCGGGAGGCTCAGGGAAGAGGCAGGGCGGAAGCTGGTGGTTGAGTGTACCGGTGAAGGT
ATCGTCTTCATTGAAGCCGATGCCGACGTTACGCTTGAGCAGTTCGGCGATGCTCTTCAG
CCTCCATTCCCGGGCTTGGAGGAGCTCATTTACGATGCTCCGGGCTCCGGCGGGGTGCTC
AACTCTCCATTATTGCTCATTCAGGTGACACGGCTCCAGTGCGGAGGGTTCATCTTTGGG
CTGAGGCTGAACCATACCATGAGCGACGCGGCCGGCCTGGTCCAATTCATGAGCGCAGTG
GGGGAGATGGCGCGTGGCGCCTCCGCCCCGTCGATTCCACCCGTGTGGCGGAGGGACCTT
CTCAATGCTAGAGACCCGCCGCGCGTGACGCGCACGCACCACGAGTACGACGAAGTGGCC
GACACCAAAGGCACCATCATCCCCCTCGATGACATGGAACATCGCTCCTTCTTCTTCGGC
CCCACCGAGTTCGCCGCCCTCCGCCGCCTCCTCTCTCCCCACCTCCGCACCTGCTCCACC
TTCGAGCTCCTCACCGCCTGCCTCTGGCGCTGCCGCACCATCGCCCTCCGCCCGGACCCG
GAGGAGGAGGTGCGCGTGCTCTGCATCGTCAACGCGCGATCCAGGCTCCAACCCCCTCTC
CCCGCCGGCTACTACGGCAACGTCTTCGGCTTCCCGGTGGCGCTGAGCTCCGCCGGAAAG
CTCTGCCGGAACCCATTGGAGTACGCGCTTGACTTGGTGAAGGGGGCCAAAAACTCCGTC
GACCAAGAGTACATGAAGTCAGTGGCGGATCTGATGGTCAGCACGGGGCGGCGACACTTC
ACGGTGGTGAGGAGCTACCTGGTGTCGGACCTGACACGCGCGGGGTTCGGGGACGTGGAT
TTTGGGTGGGGGAAGGCGGTATATGGTGGGGCGGCGAAGGGTGGGGTGGGGGCCATTCCT
GGGGTGGCGAGCTTCTACATTCCGTTCAGAAATCATAAAGGAGAAGATGGGATAGTGGTC
CCATTTTGCCTACCAGCAGCAGCCATGGAAATATTCGTGAAGGAATTGAATAGCTTGCTG
AAGGAGGAGCACCCACTTCCTTCAAACAAGTCTTCCACCTTCATCATATCAGCACTGTAG

Peptide Sequence

PEP ID

VIT_16s0039g00570.t01
PEP Infomation

pep chromosome:12X:16:283917:286597:-1 gene:VIT_16s0039g00570 transcript:VIT_16s0039g00570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPPPSLVFSVRRSKPELVAPAKPTPHEFKPLSDIDDQEGLRFQIPVIQFYKKVPSMHGR
DPAKVIKDAVARALVFYYPFAGRLREEAGRKLVVECTGEGIVFIEADADVTLEQFGDALQ
PPFPGLEELIYDAPGSGGVLNSPLLLIQVTRLQCGGFIFGLRLNHTMSDAAGLVQFMSAV
GEMARGASAPSIPPVWRRDLLNARDPPRVTRTHHEYDEVADTKGTIIPLDDMEHRSFFFG
PTEFAALRRLLSPHLRTCSTFELLTACLWRCRTIALRPDPEEEVRVLCIVNARSRLQPPL
PAGYYGNVFGFPVALSSAGKLCRNPLEYALDLVKGAKNSVDQEYMKSVADLMVSTGRRHF
TVVRSYLVSDLTRAGFGDVDFGWGKAVYGGAAKGGVGAIPGVASFYIPFRNHKGEDGIVV
PFCLPAAAMEIFVKELNSLLKEEHPLPSNKSSTFIISAL

Transcript Sequence

Transcript ID

VIT_16s0039g00570.t01
Transcript Infomation

cdna chromosome:12X:16:283917:286597:-1 gene:VIT_16s0039g00570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACACCCATGGCACCACCACCTTCTCTAGTCTTCTCAGTGCGAAGGAGCAAGCCAGAACT
GGTGGCTCCGGCCAAGCCCACGCCCCACGAGTTCAAACCCCTGTCGGACATCGATGACCA
GGAGGGTCTCCGTTTCCAAATCCCTGTCATACAGTTCTACAAAAAGGTCCCCTCCATGCA
TGGGAGGGACCCTGCCAAGGTGATCAAAGACGCGGTGGCTAGAGCGCTGGTCTTCTACTA
CCCCTTTGCCGGGAGGCTCAGGGAAGAGGCAGGGCGGAAGCTGGTGGTTGAGTGTACCGG
TGAAGGTATCGTCTTCATTGAAGCCGATGCCGACGTTACGCTTGAGCAGTTCGGCGATGC
TCTTCAGCCTCCATTCCCGGGCTTGGAGGAGCTCATTTACGATGCTCCGGGCTCCGGCGG
GGTGCTCAACTCTCCATTATTGCTCATTCAGGTGACACGGCTCCAGTGCGGAGGGTTCAT
CTTTGGGCTGAGGCTGAACCATACCATGAGCGACGCGGCCGGCCTGGTCCAATTCATGAG
CGCAGTGGGGGAGATGGCGCGTGGCGCCTCCGCCCCGTCGATTCCACCCGTGTGGCGGAG
GGACCTTCTCAATGCTAGAGACCCGCCGCGCGTGACGCGCACGCACCACGAGTACGACGA
AGTGGCCGACACCAAAGGCACCATCATCCCCCTCGATGACATGGAACATCGCTCCTTCTT
CTTCGGCCCCACCGAGTTCGCCGCCCTCCGCCGCCTCCTCTCTCCCCACCTCCGCACCTG
CTCCACCTTCGAGCTCCTCACCGCCTGCCTCTGGCGCTGCCGCACCATCGCCCTCCGCCC
GGACCCGGAGGAGGAGGTGCGCGTGCTCTGCATCGTCAACGCGCGATCCAGGCTCCAACC
CCCTCTCCCCGCCGGCTACTACGGCAACGTCTTCGGCTTCCCGGTGGCGCTGAGCTCCGC
CGGAAAGCTCTGCCGGAACCCATTGGAGTACGCGCTTGACTTGGTGAAGGGGGCCAAAAA
CTCCGTCGACCAAGAGTACATGAAGTCAGTGGCGGATCTGATGGTCAGCACGGGGCGGCG
ACACTTCACGGTGGTGAGGAGCTACCTGGTGTCGGACCTGACACGCGCGGGGTTCGGGGA
CGTGGATTTTGGGTGGGGGAAGGCGGTATATGGTGGGGCGGCGAAGGGTGGGGTGGGGGC
CATTCCTGGGGTGGCGAGCTTCTACATTCCGTTCAGAAATCATAAAGGAGAAGATGGGAT
AGTGGTCCCATTTTGCCTACCAGCAGCAGCCATGGAAATATTCGTGAAGGAATTGAATAG
CTTGCTGAAGGAGGAGCACCCACTTCCTTCAAACAAGTCTTCCACCTTCATCATATCAGC
ACTGTAGACGCATTCCTCTAAATCCTGTACCACCATCTCAATATCTATATGTTCATGTTT
TTCTCCCATTTTAGGGGGAGGGGGATATATTAGAGGTGGTGGTTGGTGACATATGCTTTT
GAATCTATAGTATCTTCTTTTTTTTAATGATTATTGAGCAATAATTGTGCCACGCTTGTC
CAATAGTACCATCCTTCCTAATTGACCTCACTAGTGTAGGCAATGTAGTCTCTGTCACAC
CCCAACTTCCCAAGTCAAGATTTTTGTGAGTTTATGCCTAAGTGGTTCAGCCCTGAAAGA
AAGACGAGGCTTGGTGATTACTGATTAGTGAAGTCTTTAGAATGAATAGTCCTGTAAATA
GTTTGTTTATTCAAATTTACAAATGCATTATTTTTTATAT