Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_16s0039g00260.t01
CDS Infomation	cds chromosome:12X:16:133249:134937:1 gene:VIT_16s0039g00260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7T7D0]
Sequence	ATGACTAACAATATTGGAACAGACTTGATACGCTATGAAGTTACAGATCCTAGTGACCAC CCCTTGAATCCCAAGCCAGGAACTCTCAGATTCGGTGCCACCAACATTAAAGGAAAGGTG TGGATAACATTCAAACAAAGCATGAGAATCAAACTCGAGAAACCGCTACTCATTAGTAGT TTCACCACCATTGATGGGAGAGGTGCCAGCATTCACATTGCAGGAGGTGCATGCCTCTTG CTTCATGAGGTGACTAATGTAATCATCCACGGTATCCGGATTCACCACTGCCGAGCCCAA ATGCCTGGTCAAGTGTTGGGTCCAGATTCAAAGATGATGGAGCTGGGTCATGTAGATGGG GATGCAATCAGGCTGGTTGCATCCTCACAAATTTGGATAGATCACAATACACTCTACGAG TGCCAGGATGGTCTCCTGGATGTCACCCGTGGTTCTACAGACATCACCATCTCAAACAAC TGGTTCAGAAATCATGATAAAGTTATGCTCCTAGGCCATGATGATGAGTATCTTCAAGAC AAGAACATGAAGGTAACAGTTGCCTTCAACCATTTTGGTCCTAATTGCTACCAGCGGATG CCAAGGGTCCGCCATGGATATACACATGTAGTCAACAATCTCTATCTGGGATGGGAACAG TATGCCATAGGAGGAAGCATGAACCCTAGCGTTTTGAGTGAAGCAAACCTCTTTATTGCA CCAGAATCAGGGACGAAAGAGGTAACCTGGAGACAAGACAACAATGAAAATGGAAGATCA TGGAATTTTCAGTCTGTGAGGGATGTTTTTGAAAATGGAGCTCATTTCAGCCAAACAGGT GACTCTGCAAAAAGGCCACACTATAACCATCTACAGACGTTCCGAGTTGCAGATGCCAAA GCAGTAAGGCCAATTACAAGGTCATCAGGTGCTTTGCGATGCCGTAAAAGATCCAGATGC TGA

Peptide Sequence

PEP ID	VIT_16s0039g00260.t01
PEP Infomation	pep chromosome:12X:16:133249:134937:1 gene:VIT_16s0039g00260 transcript:VIT_16s0039g00260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7T7D0]
Sequence	MTNNIGTDLIRYEVTDPSDHPLNPKPGTLRFGATNIKGKVWITFKQSMRIKLEKPLLISS FTTIDGRGASIHIAGGACLLLHEVTNVIIHGIRIHHCRAQMPGQVLGPDSKMMELGHVDG DAIRLVASSQIWIDHNTLYECQDGLLDVTRGSTDITISNNWFRNHDKVMLLGHDDEYLQD KNMKVTVAFNHFGPNCYQRMPRVRHGYTHVVNNLYLGWEQYAIGGSMNPSVLSEANLFIA PESGTKEVTWRQDNNENGRSWNFQSVRDVFENGAHFSQTGDSAKRPHYNHLQTFRVADAK AVRPITRSSGALRCRKRSRC

Transcript Sequence

Transcript ID	VIT_16s0039g00260.t01
Transcript Infomation	cdna chromosome:12X:16:133249:134937:1 gene:VIT_16s0039g00260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7T7D0]
Sequence	ATGACTAACAATATTGGAACAGACTTGATACGCTATGAAGTTACAGATCCTAGTGACCAC CCCTTGAATCCCAAGCCAGGAACTCTCAGATTCGGTGCCACCAACATTAAAGGAAAGGTG TGGATAACATTCAAACAAAGCATGAGAATCAAACTCGAGAAACCGCTACTCATTAGTAGT TTCACCACCATTGATGGGAGAGGTGCCAGCATTCACATTGCAGGAGGTGCATGCCTCTTG CTTCATGAGGTGACTAATGTAATCATCCACGGTATCCGGATTCACCACTGCCGAGCCCAA ATGCCTGGTCAAGTGTTGGGTCCAGATTCAAAGATGATGGAGCTGGGTCATGTAGATGGG GATGCAATCAGGCTGGTTGCATCCTCACAAATTTGGATAGATCACAATACACTCTACGAG TGCCAGGATGGTCTCCTGGATGTCACCCGTGGTTCTACAGACATCACCATCTCAAACAAC TGGTTCAGAAATCATGATAAAGTTATGCTCCTAGGCCATGATGATGAGTATCTTCAAGAC AAGAACATGAAGGTAACAGTTGCCTTCAACCATTTTGGTCCTAATTGCTACCAGCGGATG CCAAGGGTCCGCCATGGATATACACATGTAGTCAACAATCTCTATCTGGGATGGGAACAG TATGCCATAGGAGGAAGCATGAACCCTAGCGTTTTGAGTGAAGCAAACCTCTTTATTGCA CCAGAATCAGGGACGAAAGAGGTAACCTGGAGACAAGACAACAATGAAAATGGAAGATCA TGGAATTTTCAGTCTGTGAGGGATGTTTTTGAAAATGGAGCTCATTTCAGCCAAACAGGT GACTCTGCAAAAAGGCCACACTATAACCATCTACAGACGTTCCGAGTTGCAGATGCCAAA GCAGTAAGGCCAATTACAAGGTCATCAGGTGCTTTGCGATGCCGTAAAAGATCCAGATGC TGAATCAAGACTGAAGGAGAAAAATGGCCAATTCCTGTATGAGGATAGGACTACATAGAA ACAGATTCCTTCTCTGGCTGTATAACATATTTTGGTTTCTACTTTGCTTTGTTCAATACA GTATTCACTGAAACCTAGTTTAGGTCAGAGAGAGAATATTTGTACTAAGAAACAAAGCAT ATGCTTGAACATCAATAAAACAACAATGAAGAAATAGAATGTTGGACCAGCACATAACCA TTCTTTTCCGA