Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0039g00010.t01
CDS Infomation

cds chromosome:12X:16:7763:12080:-1 gene:VIT_16s0039g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGAACTCTGCAAATAATGCAATGATGGAGATAGAAGCAAGCAAACCACCGGCGATG
GGGTATGTTGTAGGGGGCTTGAGCCCTCTGAGTGAAACTCTGTGGAAGGAGAGGACTGAT
ACAGAATTTGTAGGGGACGTGTCAGCAAGGCTCACTTGGAAGGATCTGACTGTGATGGTA
ACGCTCAGCAACGGAGAGACCCAAAAGGTATTGGAAGGACTAACTGGTTATGCAGAGCCT
GGGACCTTTACTGCACTCATGGGTCCTTCTGGTTCAGGAAAATCCACGCTTCTTGATGCT
TTATCCAGTCGACTTGCTGCCAATGCATTCCTCTCTGGCTCCATCCTCCTCAATGGTCGA
AAGACAAAGCTCTCCTTTGGGACTGCAGCCTACGTGACTCAAGATGACAACTTGATTGGT
ACTCTCACAGTAAGGGAGACAATCTCATATTCAGCTAGACTACGCCTCCCTGATAAGATG
CGTTGGTCAGAGAAGCGTGCATTGGTGGAGAGTACTATAATAGAAATGGGTCTTCAAGAC
TGCGCGGATACAGTTATTGGCAATTGGCATTTGCGTGGGATAAGTGGAGGGGAGAAGAGA
AGAGTCAGCATTGCTCTTGAAATCCTGATGAGGCCGAGACTACTTTTCCTTGATGAGCCA
ACAAGTGGACTTGATAGCGCATCGGCCTTCTTTGTAACCCAGACTTTACGTGGCTTATCT
AGGGATGGGAGGACTGTCATAGCTTCAATCCACCAGCCTAGCAGTGAAGTTTTTGAGCTG
TTTGATCGGTTGTACTTGCTTTCTGGAGGCAAAACTGTTTATTTTGGTCAGGCTTCAGAA
GCATATGAGTTCTTCGCACAAGCTGGCTTTCCCTGCCCTACTCTGAGAAATCCATCTGAT
CATTTTCTTCGGTGCATAAATTCTGATTTTGACAAAGTTAAGGCCACTCTGAAAGGATCC
ATGAAACTAAGGTTTGAGATAAGTGATGATCCTCTAGAGAAGGTAACCACAGCTGAAGCT
ATCCGAACTCTCATTGATTTCTATCGCACTTCTCAGTACTCTTATGCAGCAAAAGAAAAA
GTTGAAGAGATATCCAAAGTTAAAGGAACAGTGCTAGATTCAGGAGGCAGTCAGGCTAGT
TTCTTGATGCAGGCCTTTACCTTAACCAAGCGTTCGTTCATCAACATGTCCAGGGACTTT
GGGTATTACTGGCTGAGGCTAGTAATCTACATTGTGGTCACTATTTGCATTGGAACCATT
TACTTGGACGTGGGGACGAGTTACAATTCCATTCTGGCAAGGGGTTCATGTGCGTCTTTT
GTCTTTGGTTTCGTCACGTTCATGTCTATTGGTGGGTTTCCATCCTTTGTAGAAGATATG
AAGGTTTTCCAAAGGGAGAGACTGAATGGTCATTATGGCGTTACAGCATTTGTCATCAGC
AACACAATCTCTGCAATGCCGTTCTTGATTTTGATCACCTTTATATCTGGAACTGTTTGC
TACTTCATGGTCCACCTCCACCCGGGCTTCTTACATTATCTATTTTTCGTGTTGTGCCTT
TATGCGAGTGTCACTGTAGTTGAAAGCTTGATGATGGCAATAGCCAGTGTTATCCCCAAC
TTCCTCATGGGTATCATCATAGGAGCTGGAATTCAGGGAATATTCATGCTTGTTTCTGGC
TACTTTAGGCTGCCTAACGACATCCCGAAGCCTGTGTGGCGTTATCCCATGTCTTACATC
AGCTTTCATTTCTGGGCTCTACAGGGACAATACCAAAATGATTTGAAAGGGCTGATGTTC
GATAACCAGACACCGAATGGTCTTCCCAAGATTCCTGGGGACTATATTCTGGAGAACGTG
TTCCAGATTAATGTGAAGCGATCGAAATGGATAGATCTGAGCGTTATCTTCAGCATGATT
GTGGTATACCGCATCATATTCTTCATCATGATCAAGATCAATGAGGATGTGACCCCCTGG
GTGAGAGGTTACATAGCAAGGAGAAGAATGCAGCAGAAGAATGGAAACCAGACAACAACA
ATCGCTCCAGATGGCCTTACACAGTCCCCTTCTCTTAGGTCCTATGTGGCCACAACTGGG
ACTGGTAGTAAAAGGTAG

Peptide Sequence

PEP ID

VIT_16s0039g00010.t01
PEP Infomation

pep chromosome:12X:16:7763:12080:-1 gene:VIT_16s0039g00010 transcript:VIT_16s0039g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRNSANNAMMEIEASKPPAMGYVVGGLSPLSETLWKERTDTEFVGDVSARLTWKDLTVMV
TLSNGETQKVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGR
KTKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMRWSEKRALVESTIIEMGLQD
CADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRGLS
RDGRTVIASIHQPSSEVFELFDRLYLLSGGKTVYFGQASEAYEFFAQAGFPCPTLRNPSD
HFLRCINSDFDKVKATLKGSMKLRFEISDDPLEKVTTAEAIRTLIDFYRTSQYSYAAKEK
VEEISKVKGTVLDSGGSQASFLMQAFTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGTI
YLDVGTSYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVIS
NTISAMPFLILITFISGTVCYFMVHLHPGFLHYLFFVLCLYASVTVVESLMMAIASVIPN
FLMGIIIGAGIQGIFMLVSGYFRLPNDIPKPVWRYPMSYISFHFWALQGQYQNDLKGLMF
DNQTPNGLPKIPGDYILENVFQINVKRSKWIDLSVIFSMIVVYRIIFFIMIKINEDVTPW
VRGYIARRRMQQKNGNQTTTIAPDGLTQSPSLRSYVATTGTGSKR

Transcript Sequence

Transcript ID

VIT_16s0039g00010.t01
Transcript Infomation

cdna chromosome:12X:16:7763:12080:-1 gene:VIT_16s0039g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGGGTGGGCAGTTGTTAGAGAATGAAGAAGAGTGTGAGAGGAGGTTTTGGAGAAGAAGG
TGGTGTTGCTGATGAGTTGATCACACCAAAAGCGACCCAAGTTGAGGCTCATTTTGCATG
AGATTTGTAATATCGGTTCAACTTCCACAGTCAAATTCACAATCTCTCATTTCACATACT
TGCTCCTCATACAATATCCATTTTCTCCATTTTCTGTTTCTCATAACCTCTTCCACTCCT
CCTCATCGTCCTTGTTCAGATCTCCCATAACGTTCTCCGCCAAGCCACATCTTTGCCTCA
CATATATCATGTTCTGTTTTCTTCTATAAATTTTCATTTCCTCGGTTTGATTTTTCCTCA
TCTTTTATTTTTGTTTTTGACTTTTCTAAATCTTTTCTTTCCGAGTATAAGGGCTGAAAA
AGAGAAATTATAAATGAGGAACTCTGCAAATAATGCAATGATGGAGATAGAAGCAAGCAA
ACCACCGGCGATGGGGTATGTTGTAGGGGGCTTGAGCCCTCTGAGTGAAACTCTGTGGAA
GGAGAGGACTGATACAGAATTTGTAGGGGACGTGTCAGCAAGGCTCACTTGGAAGGATCT
GACTGTGATGGTAACGCTCAGCAACGGAGAGACCCAAAAGGTATTGGAAGGACTAACTGG
TTATGCAGAGCCTGGGACCTTTACTGCACTCATGGGTCCTTCTGGTTCAGGAAAATCCAC
GCTTCTTGATGCTTTATCCAGTCGACTTGCTGCCAATGCATTCCTCTCTGGCTCCATCCT
CCTCAATGGTCGAAAGACAAAGCTCTCCTTTGGGACTGCAGCCTACGTGACTCAAGATGA
CAACTTGATTGGTACTCTCACAGTAAGGGAGACAATCTCATATTCAGCTAGACTACGCCT
CCCTGATAAGATGCGTTGGTCAGAGAAGCGTGCATTGGTGGAGAGTACTATAATAGAAAT
GGGTCTTCAAGACTGCGCGGATACAGTTATTGGCAATTGGCATTTGCGTGGGATAAGTGG
AGGGGAGAAGAGAAGAGTCAGCATTGCTCTTGAAATCCTGATGAGGCCGAGACTACTTTT
CCTTGATGAGCCAACAAGTGGACTTGATAGCGCATCGGCCTTCTTTGTAACCCAGACTTT
ACGTGGCTTATCTAGGGATGGGAGGACTGTCATAGCTTCAATCCACCAGCCTAGCAGTGA
AGTTTTTGAGCTGTTTGATCGGTTGTACTTGCTTTCTGGAGGCAAAACTGTTTATTTTGG
TCAGGCTTCAGAAGCATATGAGTTCTTCGCACAAGCTGGCTTTCCCTGCCCTACTCTGAG
AAATCCATCTGATCATTTTCTTCGGTGCATAAATTCTGATTTTGACAAAGTTAAGGCCAC
TCTGAAAGGATCCATGAAACTAAGGTTTGAGATAAGTGATGATCCTCTAGAGAAGGTAAC
CACAGCTGAAGCTATCCGAACTCTCATTGATTTCTATCGCACTTCTCAGTACTCTTATGC
AGCAAAAGAAAAAGTTGAAGAGATATCCAAAGTTAAAGGAACAGTGCTAGATTCAGGAGG
CAGTCAGGCTAGTTTCTTGATGCAGGCCTTTACCTTAACCAAGCGTTCGTTCATCAACAT
GTCCAGGGACTTTGGGTATTACTGGCTGAGGCTAGTAATCTACATTGTGGTCACTATTTG
CATTGGAACCATTTACTTGGACGTGGGGACGAGTTACAATTCCATTCTGGCAAGGGGTTC
ATGTGCGTCTTTTGTCTTTGGTTTCGTCACGTTCATGTCTATTGGTGGGTTTCCATCCTT
TGTAGAAGATATGAAGGTTTTCCAAAGGGAGAGACTGAATGGTCATTATGGCGTTACAGC
ATTTGTCATCAGCAACACAATCTCTGCAATGCCGTTCTTGATTTTGATCACCTTTATATC
TGGAACTGTTTGCTACTTCATGGTCCACCTCCACCCGGGCTTCTTACATTATCTATTTTT
CGTGTTGTGCCTTTATGCGAGTGTCACTGTAGTTGAAAGCTTGATGATGGCAATAGCCAG
TGTTATCCCCAACTTCCTCATGGGTATCATCATAGGAGCTGGAATTCAGGGAATATTCAT
GCTTGTTTCTGGCTACTTTAGGCTGCCTAACGACATCCCGAAGCCTGTGTGGCGTTATCC
CATGTCTTACATCAGCTTTCATTTCTGGGCTCTACAGGGACAATACCAAAATGATTTGAA
AGGGCTGATGTTCGATAACCAGACACCGAATGGTCTTCCCAAGATTCCTGGGGACTATAT
TCTGGAGAACGTGTTCCAGATTAATGTGAAGCGATCGAAATGGATAGATCTGAGCGTTAT
CTTCAGCATGATTGTGGTATACCGCATCATATTCTTCATCATGATCAAGATCAATGAGGA
TGTGACCCCCTGGGTGAGAGGTTACATAGCAAGGAGAAGAATGCAGCAGAAGAATGGAAA
CCAGACAACAACAATCGCTCCAGATGGCCTTACACAGTCCCCTTCTCTTAGGTCCTATGT
GGCCACAACTGGGACTGGTAGTAAAAGGTAGAAGAAAGAGAATTATGATGCCAGTCTATT
TCACTTCCAACAACAATGTAATAGAGAATTTACTCCATCTAATAACCATCCTTACTTGGA
GATAAGGGGATTCTATATATAAAAAGATGTTACCTTTCCTTCTGCATCAA