Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0022g02190.t01
CDS Infomation

cds chromosome:12X:16:14671328:14672864:1 gene:VIT_16s0022g02190 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HAR1]
Sequence

ATGGAGCCTCTTTCAAAGCTCAGTCATGACCCTCATCCCAAGGCTATCACCACCACCACC
ACCTTCCATTCCGGTCTCTTCTCAAAGCTTCTGCACTCAACCCTTTGGGAACTTGTAAGG
TTTTCTGTTCTTCTTCTTGTGACCTCCATTCAAGTTCTTTCCCTTCTACATGGATGGAAC
CCCATCTTCCACCTCCTCTCCCTCACTTGTTTCTTTCTGGTCTTCATTTTGAAGCCTCTC
CTCTCAAAGCCCCATGTCTACCTTGTAGACTTCTCATGTCTCAAACCACCAAACTTTTGC
AGAGTTCCCTTCTCATCTTTCCTTGAACATACCTCCATGATCGGATCCTTTGACAGAGAA
AGCATAGATTTCATGGCCAAAATCCTCGCTTCTTCAGGACTAGGTGAACAGACCTATCTC
CCTCCAGCTTTACATTACATTCCACCCATGACCGATCTCCAAGAATCCATCAAGGAAGTC
CACATGGTACTGTTCCATGTAATGGAAGACCTTCTGTCCAAGACTAAACTATCTCCTCGA
GATATTGATATACTTATCATAAACTGTAGTGGTTTTTGCCCATCTCCTTCCCTCTCCTCC
ATTATCATCAACAAATACTCCATGAGAAATGATATTAAAAGCTTTAATCTTTCTGGTATG
GGGTGCAGTGCTGGAATCCTTGGCGTCCATTTGGCTCAAAATCTATTGAAAGTTCACAAA
AATACTTACGCCGTTGTTCTTAGCACAGAGATCTTATCGACTGGTTGGTACCCTGGTAAC
GAGAGGCCAAAGTTGCTCCTCAATTGTCTCTTTCGAACGGGCAGTGCAGCAATCTTGCTT
ACAAATAAAGAAGAAGCGAAAAAAACATCCAAGTATAGGCTTCTTCACACGCTGAGAATA
CAGAGAGCATTTGACGACAAGGCTTATCGCTCAGCGATTCGCGAAGAGGACTCAAATGGA
ATCACTGGGTTTACACTCAGCCGCGACATATTACAAGCAGCCGGAGAAACTCTTCGGTCA
AATATAACTATTCTTGGCTCGTCCATGTTGCCATTCTTGGAGAAATTCAGGCATGGAGTA
TCCATATTCCGGAAGAGATTCATTCACAAATCTGCAGAAGTTTACGTGCCGGAATTTAGG
ACAGTGATACAGCATTTTGTTCTTCCAACTTCAGGGAGATCAGTGATAAAAGAGATAGGA
AAAGGGTTGAAGCTCGGCGAGGGAGAGATGGAGGCTGCTCTGATGACATTGCAGAGGTTT
GGAAACCAATCTTCGTCTTCATTGTGGTATGAATTAGCTTACATGGAGGCTAAGGAGAGA
GTGAAGAAGGGTGACAAGGTGTGGCAGCTTGGCATGGGAAGTGGGCCCAAGTGCGGTACT
GTGGTCTGGGAGTGCATTAGGTCCATGGTCGGGGAGTCCACTAAGGGCCCATGGGCCGAT
TGTATAGATAAGTATCCAATCTTAGCCGTCCATCAAGACAATTGA

Peptide Sequence

PEP ID

VIT_16s0022g02190.t01
PEP Infomation

pep chromosome:12X:16:14671328:14672864:1 gene:VIT_16s0022g02190 transcript:VIT_16s0022g02190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HAR1]
Sequence

MEPLSKLSHDPHPKAITTTTTFHSGLFSKLLHSTLWELVRFSVLLLVTSIQVLSLLHGWN
PIFHLLSLTCFFLVFILKPLLSKPHVYLVDFSCLKPPNFCRVPFSSFLEHTSMIGSFDRE
SIDFMAKILASSGLGEQTYLPPALHYIPPMTDLQESIKEVHMVLFHVMEDLLSKTKLSPR
DIDILIINCSGFCPSPSLSSIIINKYSMRNDIKSFNLSGMGCSAGILGVHLAQNLLKVHK
NTYAVVLSTEILSTGWYPGNERPKLLLNCLFRTGSAAILLTNKEEAKKTSKYRLLHTLRI
QRAFDDKAYRSAIREEDSNGITGFTLSRDILQAAGETLRSNITILGSSMLPFLEKFRHGV
SIFRKRFIHKSAEVYVPEFRTVIQHFVLPTSGRSVIKEIGKGLKLGEGEMEAALMTLQRF
GNQSSSSLWYELAYMEAKERVKKGDKVWQLGMGSGPKCGTVVWECIRSMVGESTKGPWAD
CIDKYPILAVHQDN

Transcript Sequence

Transcript ID

VIT_16s0022g02190.t01
Transcript Infomation

cdna chromosome:12X:16:14671328:14672864:1 gene:VIT_16s0022g02190 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HAR1]
Sequence

ATGGAGCCTCTTTCAAAGCTCAGTCATGACCCTCATCCCAAGGCTATCACCACCACCACC
ACCTTCCATTCCGGTCTCTTCTCAAAGCTTCTGCACTCAACCCTTTGGGAACTTGTAAGG
TTTTCTGTTCTTCTTCTTGTGACCTCCATTCAAGTTCTTTCCCTTCTACATGGATGGAAC
CCCATCTTCCACCTCCTCTCCCTCACTTGTTTCTTTCTGGTCTTCATTTTGAAGCCTCTC
CTCTCAAAGCCCCATGTCTACCTTGTAGACTTCTCATGTCTCAAACCACCAAACTTTTGC
AGAGTTCCCTTCTCATCTTTCCTTGAACATACCTCCATGATCGGATCCTTTGACAGAGAA
AGCATAGATTTCATGGCCAAAATCCTCGCTTCTTCAGGACTAGGTGAACAGACCTATCTC
CCTCCAGCTTTACATTACATTCCACCCATGACCGATCTCCAAGAATCCATCAAGGAAGTC
CACATGGTACTGTTCCATGTAATGGAAGACCTTCTGTCCAAGACTAAACTATCTCCTCGA
GATATTGATATACTTATCATAAACTGTAGTGGTTTTTGCCCATCTCCTTCCCTCTCCTCC
ATTATCATCAACAAATACTCCATGAGAAATGATATTAAAAGCTTTAATCTTTCTGGTATG
GGGTGCAGTGCTGGAATCCTTGGCGTCCATTTGGCTCAAAATCTATTGAAAGTTCACAAA
AATACTTACGCCGTTGTTCTTAGCACAGAGATCTTATCGACTGGTTGGTACCCTGGTAAC
GAGAGGCCAAAGTTGCTCCTCAATTGTCTCTTTCGAACGGGCAGTGCAGCAATCTTGCTT
ACAAATAAAGAAGAAGCGAAAAAAACATCCAAGTATAGGCTTCTTCACACGCTGAGAATA
CAGAGAGCATTTGACGACAAGGCTTATCGCTCAGCGATTCGCGAAGAGGACTCAAATGGA
ATCACTGGGTTTACACTCAGCCGCGACATATTACAAGCAGCCGGAGAAACTCTTCGGTCA
AATATAACTATTCTTGGCTCGTCCATGTTGCCATTCTTGGAGAAATTCAGGCATGGAGTA
TCCATATTCCGGAAGAGATTCATTCACAAATCTGCAGAAGTTTACGTGCCGGAATTTAGG
ACAGTGATACAGCATTTTGTTCTTCCAACTTCAGGGAGATCAGTGATAAAAGAGATAGGA
AAAGGGTTGAAGCTCGGCGAGGGAGAGATGGAGGCTGCTCTGATGACATTGCAGAGGTTT
GGAAACCAATCTTCGTCTTCATTGTGGTATGAATTAGCTTACATGGAGGCTAAGGAGAGA
GTGAAGAAGGGTGACAAGGTGTGGCAGCTTGGCATGGGAAGTGGGCCCAAGTGCGGTACT
GTGGTCTGGGAGTGCATTAGGTCCATGGTCGGGGAGTCCACTAAGGGCCCATGGGCCGAT
TGTATAGATAAGTATCCAATCTTAGCCGTCCATCAAGACAATTGATCTGATGTAGTAATG
ATCATGATCATATCACATGTTACTTTTTATGTTTTGC