Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0022g01820.t01
CDS Infomation

cds chromosome:12X:16:14017328:14022969:-1 gene:VIT_16s0022g01820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTAATGTCCAAAGTGATCCGCTCCTACAAGTTGAAACAACATGTGGATCTCTTCTA
TATGAGCTTCAGATAATATGGGATGAAGTTGGGGAGTCTGATACTGATAGGGATAAAATG
CTGCTTGAACTTGAACGAGAGTGTCTAGAAGTTTATAGGAGAAAGGTAGATCAGGCAAAC
CGATGTAGAGCTCAGCTACGACAGGCAATTGCTGATTCTGAAGCAGAGCTTGCTGCCATA
TGTTCTGCCATGGGGGAGCGACCAGTGCATATCAGGCAGTCTGATCAAAATGCTGGAAGT
TTGAAAGAGGAGCTCAAGGCCATTATTCCACAACTGGAAGAGATGCACAAACGGAAAAGT
GAGAGAAGGAATCAATTTTTTGAAGTTGTGGAGGAAATAGAGAAGATAAAAAGTGAAATC
TATAGTTCCACAGAGTACATTGCTTCCAAGACAGTTGTAGATGACACTGACCTGTCTTTA
AGAAAGCTTGAGGAATTGCACAAACAGCTTCAGGCACTTCAAAAAGAGAAGAGTGATCGC
TTAAAGCAGGTTCTCGACCACCTGAGTACTTTGAACTCTCTTTGTTTGGTCCTTGGTATG
GATTTCCAGCAAACAGTTAATGAGGTTCATCCCAGTTTAGGTGATTCTGATGGAAGAAAG
AACATAAGTAATGCCACAATTGAGCAGTTGGCAGCTGCAATAAAGACCTTGCGAGGGGTT
AAAATACAGAGAATGCAGAGGCTCCAAGATCTTGCATCTTCCATGTTGGAGCTATGGAAT
TTGATGGATACACCAATTGAAGAGCAACAGTTGTTTCAGAACGTTACTTGTAATATTGCT
GCTTCAGAACATGAGATAAATGAGCCCAACACACTCTCTGTGGACTTCATTAATTATGTA
GAGGCAGAAGTTTCTAGGCTGGAAGAGCTGAAAGCAAGCAAAATGAAAGAGCTTGTTTTA
AAGAAGAGGTCAGAACTAGAGGAGATCTGTAGGAAGACACATATGATCCCAGAAGCAGAT
AGTGCGCTGGATTATGTTATTGAAGCTATGGAGTCTGGAGCTGTGGATGCTTCTTGTGTC
CTTGAACAAATTGAACTTCAAGTTGCAAAGGTTAAAGAGGAAGCTTTTAGCAGGAAAGAA
ATACTTGAAAAAGTTGATAAATGGTTGGCTGCATGTGAGGAGGAGAGTTGGCTTGAGGAA
TATAATAGGGATGACAACCGATATAATGCTGGTAGAGGCGCTCATCTTACTCTCAAGCGT
GCTGAGAAAGCTCGTTCTTTGGTTAATAAACTTCCAGCAATGGTGGATGCATTGGCTTCA
AAAACTGTGGCATGGGAGAAGGAGAGAGGTGTTGAGTTCACATATGATGGGATTCGTCTT
CTTTCTATGCTTGAAGAGTATACTTTTCTACGGCAAGAGAAAGAGGAAGAACGCCGAAGG
CAGAGGGACCAGAAGAAACTTCAGGGGCAGCTAATAGCTGAACAAGAGGCACTTTTTGGG
TCAAAACCAAGTCCTTCAAAGCCACAGAGTGTTAAAAAGGCTTCTAGAGTTTCAACTGGA
AGCACAGGCAGCAGAAGACTCTCTGTTGGAGGAGCAATGATTCAAACTCCCAAACCTGAT
CCAATTCACTCTACAAAAGCCACCCCTAGGCCAGGCAAGAAGAGTGATCGTTACCAAATT
GACCAAGTAAGACATTGCCAGGATGATGGGTTTACAGCATTATCAGCTGGTACTAGAGGT
TTGGACATTGCAGGGCTCCCCATAAAAAAGCAATCCTTCAATCCACGTGAAATAGACTCA
CCCATGATGCGAAAACCCTTCTCGCCAATATCTTCCACAGCATCATCAGAAGCCAACACC
ATGTTAGAAGATCTCAACAGACCTCAGCCCAAGATACTGCACAAGACAGTGTCTAGTAAC
AACATCCCCTACACAACTCCCTCCAAATCACAACTACCACCACCTTCTGCCACAGATGAA
GAGAACAGGACCCCAAAGACAATGCCAATTCCTGTCCCCTCCACACCTTCAACTGTATCA
GTGCCAATGCTGACAGCCATGACCCCTGCTCCCCCTCCAGCCCCGGTCCCTTACAATGCT
AATCCAGTAGAAGAGACCGAGTACTCATTTGAGGAAAGAAGAGCTGGTTTTGTGCTGCCC
CAGGCACATCTAAAGACTGCAATACAAGTTTGA

Peptide Sequence

PEP ID

VIT_16s0022g01820.t01
PEP Infomation

pep chromosome:12X:16:14017328:14022969:-1 gene:VIT_16s0022g01820 transcript:VIT_16s0022g01820.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSNVQSDPLLQVETTCGSLLYELQIIWDEVGESDTDRDKMLLELERECLEVYRRKVDQAN
RCRAQLRQAIADSEAELAAICSAMGERPVHIRQSDQNAGSLKEELKAIIPQLEEMHKRKS
ERRNQFFEVVEEIEKIKSEIYSSTEYIASKTVVDDTDLSLRKLEELHKQLQALQKEKSDR
LKQVLDHLSTLNSLCLVLGMDFQQTVNEVHPSLGDSDGRKNISNATIEQLAAAIKTLRGV
KIQRMQRLQDLASSMLELWNLMDTPIEEQQLFQNVTCNIAASEHEINEPNTLSVDFINYV
EAEVSRLEELKASKMKELVLKKRSELEEICRKTHMIPEADSALDYVIEAMESGAVDASCV
LEQIELQVAKVKEEAFSRKEILEKVDKWLAACEEESWLEEYNRDDNRYNAGRGAHLTLKR
AEKARSLVNKLPAMVDALASKTVAWEKERGVEFTYDGIRLLSMLEEYTFLRQEKEEERRR
QRDQKKLQGQLIAEQEALFGSKPSPSKPQSVKKASRVSTGSTGSRRLSVGGAMIQTPKPD
PIHSTKATPRPGKKSDRYQIDQVRHCQDDGFTALSAGTRGLDIAGLPIKKQSFNPREIDS
PMMRKPFSPISSTASSEANTMLEDLNRPQPKILHKTVSSNNIPYTTPSKSQLPPPSATDE
ENRTPKTMPIPVPSTPSTVSVPMLTAMTPAPPPAPVPYNANPVEETEYSFEERRAGFVLP
QAHLKTAIQV

Transcript Sequence

Transcript ID

VIT_16s0022g01820.t01
Transcript Infomation

cdna chromosome:12X:16:14017328:14022969:-1 gene:VIT_16s0022g01820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCAAACATAGCAACTCCCACATTTTCCGTCCAAATTTTCTCGAAGATAGAAAGTTCGCT
CAAATATTCCACCGCGTCGGTTCTTCAGCAGGTACAATTCCTTCAACATGTCTAATGTCC
AAAGTGATCCGCTCCTACAAGTTGAAACAACATGTGGATCTCTTCTATATGAGCTTCAGA
TAATATGGGATGAAGTTGGGGAGTCTGATACTGATAGGGATAAAATGCTGCTTGAACTTG
AACGAGAGTGTCTAGAAGTTTATAGGAGAAAGGTAGATCAGGCAAACCGATGTAGAGCTC
AGCTACGACAGGCAATTGCTGATTCTGAAGCAGAGCTTGCTGCCATATGTTCTGCCATGG
GGGAGCGACCAGTGCATATCAGGCAGTCTGATCAAAATGCTGGAAGTTTGAAAGAGGAGC
TCAAGGCCATTATTCCACAACTGGAAGAGATGCACAAACGGAAAAGTGAGAGAAGGAATC
AATTTTTTGAAGTTGTGGAGGAAATAGAGAAGATAAAAAGTGAAATCTATAGTTCCACAG
AGTACATTGCTTCCAAGACAGTTGTAGATGACACTGACCTGTCTTTAAGAAAGCTTGAGG
AATTGCACAAACAGCTTCAGGCACTTCAAAAAGAGAAGAGTGATCGCTTAAAGCAGGTTC
TCGACCACCTGAGTACTTTGAACTCTCTTTGTTTGGTCCTTGGTATGGATTTCCAGCAAA
CAGTTAATGAGGTTCATCCCAGTTTAGGTGATTCTGATGGAAGAAAGAACATAAGTAATG
CCACAATTGAGCAGTTGGCAGCTGCAATAAAGACCTTGCGAGGGGTTAAAATACAGAGAA
TGCAGAGGCTCCAAGATCTTGCATCTTCCATGTTGGAGCTATGGAATTTGATGGATACAC
CAATTGAAGAGCAACAGTTGTTTCAGAACGTTACTTGTAATATTGCTGCTTCAGAACATG
AGATAAATGAGCCCAACACACTCTCTGTGGACTTCATTAATTATGTAGAGGCAGAAGTTT
CTAGGCTGGAAGAGCTGAAAGCAAGCAAAATGAAAGAGCTTGTTTTAAAGAAGAGGTCAG
AACTAGAGGAGATCTGTAGGAAGACACATATGATCCCAGAAGCAGATAGTGCGCTGGATT
ATGTTATTGAAGCTATGGAGTCTGGAGCTGTGGATGCTTCTTGTGTCCTTGAACAAATTG
AACTTCAAGTTGCAAAGGTTAAAGAGGAAGCTTTTAGCAGGAAAGAAATACTTGAAAAAG
TTGATAAATGGTTGGCTGCATGTGAGGAGGAGAGTTGGCTTGAGGAATATAATAGGGATG
ACAACCGATATAATGCTGGTAGAGGCGCTCATCTTACTCTCAAGCGTGCTGAGAAAGCTC
GTTCTTTGGTTAATAAACTTCCAGCAATGGTGGATGCATTGGCTTCAAAAACTGTGGCAT
GGGAGAAGGAGAGAGGTGTTGAGTTCACATATGATGGGATTCGTCTTCTTTCTATGCTTG
AAGAGTATACTTTTCTACGGCAAGAGAAAGAGGAAGAACGCCGAAGGCAGAGGGACCAGA
AGAAACTTCAGGGGCAGCTAATAGCTGAACAAGAGGCACTTTTTGGGTCAAAACCAAGTC
CTTCAAAGCCACAGAGTGTTAAAAAGGCTTCTAGAGTTTCAACTGGAAGCACAGGCAGCA
GAAGACTCTCTGTTGGAGGAGCAATGATTCAAACTCCCAAACCTGATCCAATTCACTCTA
CAAAAGCCACCCCTAGGCCAGGCAAGAAGAGTGATCGTTACCAAATTGACCAAGTAAGAC
ATTGCCAGGATGATGGGTTTACAGCATTATCAGCTGGTACTAGAGGTTTGGACATTGCAG
GGCTCCCCATAAAAAAGCAATCCTTCAATCCACGTGAAATAGACTCACCCATGATGCGAA
AACCCTTCTCGCCAATATCTTCCACAGCATCATCAGAAGCCAACACCATGTTAGAAGATC
TCAACAGACCTCAGCCCAAGATACTGCACAAGACAGTGTCTAGTAACAACATCCCCTACA
CAACTCCCTCCAAATCACAACTACCACCACCTTCTGCCACAGATGAAGAGAACAGGACCC
CAAAGACAATGCCAATTCCTGTCCCCTCCACACCTTCAACTGTATCAGTGCCAATGCTGA
CAGCCATGACCCCTGCTCCCCCTCCAGCCCCGGTCCCTTACAATGCTAATCCAGTAGAAG
AGACCGAGTACTCATTTGAGGAAAGAAGAGCTGGTTTTGTGCTGCCCCAGGCACATCTAA
AGACTGCAATACAAGTTTGATTTTTGTTTGGTTAGAAGACTTTCCAAGTGTTGTTCTTCT
TTCACTTTTTTGTTGACTTTTGTGGAAGATGAGTCAATTGTGTTATTGGCTTCTCTCTAA
TATGTGCATGGGGAGTATGGACTAGGATTATGTTGTTCCAACTGTTTCTGTTCTCAATCT
CTCCTTTCTTCTCTTCCCATGTGTATGAAACAAAAAACCAAAAAAAAAAAAAAAAAAAAA
AA