Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0022g01740.t01
CDS Infomation

cds chromosome:12X:16:13850981:13853563:-1 gene:VIT_16s0022g01740 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACTCCCAATTCCACCCCCATTGATTCCTCTTCGGGTGACGAAGCTGCAGCCAAG
GCCATGCACAAGCGTTACGAAGGTTTGGTCACTGTTCGGACCAAGGCTATCAAGGGCAAA
GGAGCTTGGTACTGGGCTCATCTTGAACCCATTTTGGTGCCTAATCCCGACACTGGTCTG
CCCAAGGCGGTTAAGCTCAAGTGTTCTTTGTGTGAAGCCGTGTTTTCAGCGTCCAATCCA
TCGAGGACTGCTTCCGAGCATCTGAAACGCGGCACTTGCCCCAATTTCAGCTCCGCTTTG
AGGCCCATTTCGACGGTATCGCCTTCTTTAGCTCTGCCTCCTTCGCATAATCATAGAAAA
AGGAGTGCCCATATGGGTGCTCCCTCTTCATCGTACCATGTTAGTTCGCTGGCTATGGTT
GATTCTCCCCGCTTCTGCGGAGAATTGGGGTACTCTTCGCCGCCACCGGTGCAAAACCCA
GTTGGGAGTGGTGGGGAAAAGGTGTTATCACACCATCAGTTAGTGTTATCCGGTGGGAAG
GAGGATTTAGGTGCATTGGCAATGTTGGAAGATAGTGTGAAGAGGCTTAAGAGTCCTAAG
GCTTCGCCGGGACCAGAATTAAGCAAGGAACAAATCAATTCTGCGCTTGAATTGCTTGCG
GATTGGTTCTATGAGTCTTGTGGCTCAGTTTCATTTTCGAGCCTCGAGCACCCAAAGTTC
CAGGCTTTTCTTAACCAAGTCGGGTTGCCCTCTGTCTCTAGGAGGGAGTTTTCGGGGGCA
CGGCTTGATACAAAGTTTGACGAGGCCAAGATTGAGTCTGAAGCCAGAATTAGAGATGCC
ATGTTTTTTCAAGTTGCTTCTGATGGGTGGAACAGCAAGAATTTTGGTTTTTCTTCAGGG
GAAGAGAATTTGGTTAAGTTTACAGTTAATCTTCCGAATGGGACTAGTGTGTTTCAGAAG
GCGGTGTTCACTGGCGGATCAGTGCCATCTAAGCATGCAGAGGAGATATTGTGGGAGACG
ATCACTGGTATATGTGGGAGTGTTGTGCAGAGGTGTGTAGGGATAGTTGCGGATAAGTAT
AAGGCCAAAGCATTGAGGAATTTGGAGATTCAGAATCATTGGATGGTTAATCTCTCTTGC
CAGCTTCAGGGGTTCATTAGTTTAATCAAGGATTTTAGCAAAGAGCTTCCACTTTTCAGC
ATTGTCACTGAAAAGTGCTTGAAGCTTGCGAATTTTATCAATATCAAGTCTCAAGTTAGG
CATAGTTTCCACAAGTTCCAATTACAGGAGCTTGATCATGTTGGGTTGCTTCGAGTTCCC
CCTTCCAAATGCGATAACATGAAGAATTTTGTGCATGTTTATGCAATGTTGGAGGATATA
ATGAGCAACGCCCAGGTACTACAATTGGTTGTGATGGATGAATCATATAAGGTGATATGT
GTAGAGGATCCAGCTGCAAGGGAAGTAGCAGATATGATTCAAGATGTGCGGTTTTGGAAT
GAGCTCGATGCAGTTCATTCGCTAGTAAAGCTTATTAGAGAAATGGCTCAAGAGATTGAG
GTTGAGAGACCTTTAGTTGGGCAATGTCTTCCTCTTTGGGAGGAGCTGAGAACAAAAGTA
AGGGAATGGTGCGTGAAATTTAACATCGATGAGGAGCCTGTTGAGAAGATAGTTGAAAAG
CGGTTCAGAAAAAACTACCATCCGGCCTGGTCAGCTGCATTTATACTTGACCCCTTTTAC
TTGATGAGGGATACGAGTGGGAAATATCTTCCACCATTCAAGTGCTTGACACATGAACAG
GAGAAGGATGTGGATAAGCTCATAACCCGTCTGGTTACAAGGGAGGAAGCTCATATTGCA
TTGATGGAACTTATGAAATGGAGGTCGGAAGGGCTTGACCCACTTTATGCACAGGCTGTT
CAGGTTAAACAGCAAGACCCTGTGACAGGAAAGATGAAAATTGCCAACCCTCAGAGCAGT
AGACTTGTGTGGGAAACTTGTCTGAAAGATTTTAAGTCATTGGGAAAGGTTGCTGTGAGG
CTCATCTTCCTCCATGCAACAGCGTGTGGGTTTAAGTGTAATTGGTCTTTCATGAGATGG
GTTTGTGTCCATGGTCACTCCAGGGTGGGCCTAGACAGGGCTCAGAAGATGATATTCATT
GCAGCTCATGCTAAGCTTGAGAGACGGGATTTCTCTAGTGAGGAAGAAAAGGATGCAGAA
CTGTTTGCCATGGCAAATGGTGAGAGTGACATGCTCAATGAGGTCTTTGCTGATGCACCC
TCAGTGTAA

Peptide Sequence

PEP ID

VIT_16s0022g01740.t01
PEP Infomation

pep chromosome:12X:16:13850981:13853563:-1 gene:VIT_16s0022g01740 transcript:VIT_16s0022g01740.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATPNSTPIDSSSGDEAAAKAMHKRYEGLVTVRTKAIKGKGAWYWAHLEPILVPNPDTGL
PKAVKLKCSLCEAVFSASNPSRTASEHLKRGTCPNFSSALRPISTVSPSLALPPSHNHRK
RSAHMGAPSSSYHVSSLAMVDSPRFCGELGYSSPPPVQNPVGSGGEKVLSHHQLVLSGGK
EDLGALAMLEDSVKRLKSPKASPGPELSKEQINSALELLADWFYESCGSVSFSSLEHPKF
QAFLNQVGLPSVSRREFSGARLDTKFDEAKIESEARIRDAMFFQVASDGWNSKNFGFSSG
EENLVKFTVNLPNGTSVFQKAVFTGGSVPSKHAEEILWETITGICGSVVQRCVGIVADKY
KAKALRNLEIQNHWMVNLSCQLQGFISLIKDFSKELPLFSIVTEKCLKLANFINIKSQVR
HSFHKFQLQELDHVGLLRVPPSKCDNMKNFVHVYAMLEDIMSNAQVLQLVVMDESYKVIC
VEDPAAREVADMIQDVRFWNELDAVHSLVKLIREMAQEIEVERPLVGQCLPLWEELRTKV
REWCVKFNIDEEPVEKIVEKRFRKNYHPAWSAAFILDPFYLMRDTSGKYLPPFKCLTHEQ
EKDVDKLITRLVTREEAHIALMELMKWRSEGLDPLYAQAVQVKQQDPVTGKMKIANPQSS
RLVWETCLKDFKSLGKVAVRLIFLHATACGFKCNWSFMRWVCVHGHSRVGLDRAQKMIFI
AAHAKLERRDFSSEEEKDAELFAMANGESDMLNEVFADAPSV

Transcript Sequence

Transcript ID

VIT_16s0022g01740.t01
Transcript Infomation

cdna chromosome:12X:16:13850981:13853563:-1 gene:VIT_16s0022g01740 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACTCCCAATTCCACCCCCATTGATTCCTCTTCGGGTGACGAAGCTGCAGCCAAG
GCCATGCACAAGCGTTACGAAGGTTTGGTCACTGTTCGGACCAAGGCTATCAAGGGCAAA
GGAGCTTGGTACTGGGCTCATCTTGAACCCATTTTGGTGCCTAATCCCGACACTGGTCTG
CCCAAGGCGGTTAAGCTCAAGTGTTCTTTGTGTGAAGCCGTGTTTTCAGCGTCCAATCCA
TCGAGGACTGCTTCCGAGCATCTGAAACGCGGCACTTGCCCCAATTTCAGCTCCGCTTTG
AGGCCCATTTCGACGGTATCGCCTTCTTTAGCTCTGCCTCCTTCGCATAATCATAGAAAA
AGGAGTGCCCATATGGGTGCTCCCTCTTCATCGTACCATGTTAGTTCGCTGGCTATGGTT
GATTCTCCCCGCTTCTGCGGAGAATTGGGGTACTCTTCGCCGCCACCGGTGCAAAACCCA
GTTGGGAGTGGTGGGGAAAAGGTGTTATCACACCATCAGTTAGTGTTATCCGGTGGGAAG
GAGGATTTAGGTGCATTGGCAATGTTGGAAGATAGTGTGAAGAGGCTTAAGAGTCCTAAG
GCTTCGCCGGGACCAGAATTAAGCAAGGAACAAATCAATTCTGCGCTTGAATTGCTTGCG
GATTGGTTCTATGAGTCTTGTGGCTCAGTTTCATTTTCGAGCCTCGAGCACCCAAAGTTC
CAGGCTTTTCTTAACCAAGTCGGGTTGCCCTCTGTCTCTAGGAGGGAGTTTTCGGGGGCA
CGGCTTGATACAAAGTTTGACGAGGCCAAGATTGAGTCTGAAGCCAGAATTAGAGATGCC
ATGTTTTTTCAAGTTGCTTCTGATGGGTGGAACAGCAAGAATTTTGGTTTTTCTTCAGGG
GAAGAGAATTTGGTTAAGTTTACAGTTAATCTTCCGAATGGGACTAGTGTGTTTCAGAAG
GCGGTGTTCACTGGCGGATCAGTGCCATCTAAGCATGCAGAGGAGATATTGTGGGAGACG
ATCACTGGTATATGTGGGAGTGTTGTGCAGAGGTGTGTAGGGATAGTTGCGGATAAGTAT
AAGGCCAAAGCATTGAGGAATTTGGAGATTCAGAATCATTGGATGGTTAATCTCTCTTGC
CAGCTTCAGGGGTTCATTAGTTTAATCAAGGATTTTAGCAAAGAGCTTCCACTTTTCAGC
ATTGTCACTGAAAAGTGCTTGAAGCTTGCGAATTTTATCAATATCAAGTCTCAAGTTAGG
CATAGTTTCCACAAGTTCCAATTACAGGAGCTTGATCATGTTGGGTTGCTTCGAGTTCCC
CCTTCCAAATGCGATAACATGAAGAATTTTGTGCATGTTTATGCAATGTTGGAGGATATA
ATGAGCAACGCCCAGGTACTACAATTGGTTGTGATGGATGAATCATATAAGGTGATATGT
GTAGAGGATCCAGCTGCAAGGGAAGTAGCAGATATGATTCAAGATGTGCGGTTTTGGAAT
GAGCTCGATGCAGTTCATTCGCTAGTAAAGCTTATTAGAGAAATGGCTCAAGAGATTGAG
GTTGAGAGACCTTTAGTTGGGCAATGTCTTCCTCTTTGGGAGGAGCTGAGAACAAAAGTA
AGGGAATGGTGCGTGAAATTTAACATCGATGAGGAGCCTGTTGAGAAGATAGTTGAAAAG
CGGTTCAGAAAAAACTACCATCCGGCCTGGTCAGCTGCATTTATACTTGACCCCTTTTAC
TTGATGAGGGATACGAGTGGGAAATATCTTCCACCATTCAAGTGCTTGACACATGAACAG
GAGAAGGATGTGGATAAGCTCATAACCCGTCTGGTTACAAGGGAGGAAGCTCATATTGCA
TTGATGGAACTTATGAAATGGAGGTCGGAAGGGCTTGACCCACTTTATGCACAGGCTGTT
CAGGTTAAACAGCAAGACCCTGTGACAGGAAAGATGAAAATTGCCAACCCTCAGAGCAGT
AGACTTGTGTGGGAAACTTGTCTGAAAGATTTTAAGTCATTGGGAAAGGTTGCTGTGAGG
CTCATCTTCCTCCATGCAACAGCGTGTGGGTTTAAGTGTAATTGGTCTTTCATGAGATGG
GTTTGTGTCCATGGTCACTCCAGGGTGGGCCTAGACAGGGCTCAGAAGATGATATTCATT
GCAGCTCATGCTAAGCTTGAGAGACGGGATTTCTCTAGTGAGGAAGAAAAGGATGCAGAA
CTGTTTGCCATGGCAAATGGTGAGAGTGACATGCTCAATGAGGTCTTTGCTGATGCACCC
TCAGTGTAATGTTTTTCTTTTTAACTCGTGTAGAATTCTAAAATTGTAGGATTTATTAAA
TTCTTTCCTCTACTTTTTCCCTTTGTCGTTGTTGTTTACTTCTAATAGAAGATTTTGAAG
GAGTAGGGTTGGGAGGGAAGGATAATGAGAGAGAATTGAACAATGTATTGTTAGAACTTC
ATAGCCTCATGATTCACATGAATCTTCAATCTCCTGACCGACCATTATTTTGGGGTTTCT
TGGGTTTGTAGAGAAGAAACTCTTTCTTGTTTATAAAGAAAAAAAAGTGGTCCAGGAACA
GAA