Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0022g00970.t01
CDS Infomation

cds chromosome:12X:16:12533135:12534882:-1 gene:VIT_16s0022g00970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTGACTGCAACACAGCCTCTGTGTCTCCACAAATCTCTGAAAATAAACAAGACCCAA
TTGCAAAAGCAAAAACAATTTCATCGAGACACAAAACCCAACCTCGTTTTCCCGAAATCA
TCCCCAACGCCACTCTTAATCAATCACAAACCCCGCAATCACACCAAACTTCAAGCCCTT
GAAGCCCTTCTCCGCGACCTCCAGGCCTCTATACAAGACGGCATTACAGTCGATGCCCAG
ATCTTTTCTTCGCTTCTTGAGACTTGTTTCCAATTACAGGCCTTTGATCATGGTATCCGA
ATTCACCGCCTTATACCCACCAGCCTCTTACGTAAAAGTGTTGCTCTTTCATCCAAGTTG
CTTAGGTTGTATGCGTCAATTGGGCGGATCGAGGAAGCCCATCGACTGTTCGATCAAATG
TCTAGGCGAAATCGCTCGGCGTTTGCTTGGAATTCGTTGATATCTGGGTACGCTGAACTG
GGTCTGTATGAAGATGCCATGGCACTTTACTTTCAGATGGAGGAAGAGGGTGTTGTGCCG
GACCGGTTCACGTTTCCACGAGTGTTGAAAGCTTGTGGAGGAATTGGCTCGATTTCGGTA
GGGGAAGAGGTGCACCGGCATGTTGTTCGTTGTGGCTTTGCGGATGATGGGTTTGTGCTC
AATGCGCTTGTTGACATGTATGCCAAGTGTGGTGACATTGTGAAGGCTCGTAAGGTGTTT
GATAAGATTGTGTGCAGGGACTCGGTTTCGTGGAATTCGATGTTAACAGGCTACATTCGT
CATGGGCTTCCTTTGCAGGCATTGAGCATCTTCCGCCGGATGCTTCAATATGGATTTGAG
CCGGATGCTGTTGCTATATCTACTGTTGTCACTGGCGTGCCATCACTAAAACTGGCAGGG
CAAATTCATGGATGGGTTCTTCGGCGTGGAGTTCAGTGGAATTTATCTATTGCTAATTCT
TTGATTGTTCTGTACTCAAATCACGGGAAATTAGATCAAGCTTGTTGGTTGTTTGATCAC
ATGCCGGAAAGGGATGTTGTGTCATGGAATTCTATAATATCTGCTCACCGGAAAGACCTG
AAAGCTATAACATATTTTTCACGGATGCAGAAGGCTGATGTGCTGCCAGATGTGGTTACA
TTTGTGTCATTACTATCTGCTTGTGCCCATTTAGGTTTGGTTAAGGATGGGGAAGGGTTA
TTTTCAATGATGAGAGAGGACTATGGAATGATTCCAAGCATGGAGCACTATGCATGTATG
GTGAATCTATATGGAAGAGCAGGATTGATTGAGGAAGCCTATGAAATCATTGAGAAGAGA
ATGGAGTTTGAGGCCGGTCCGACTGTGTGGGGAGCCTTGTTGTATGCTTGTTACTTTCAT
CACAATGTAGATATTGGAAAGATAGCTGCAGAGTGTCTTTTTGAGCTGGAGCCGGATAAT
GAACATAATTTTGAGCTTTTGATGAATATTTACCGCAATGTGGGTAGATTGGAGGATGTA
GAGAAAGTGAGAAAAATGATGGCAGATAGAGGATTTGATTCATTATACTAA

Peptide Sequence

PEP ID

VIT_16s0022g00970.t01
PEP Infomation

pep chromosome:12X:16:12533135:12534882:-1 gene:VIT_16s0022g00970 transcript:VIT_16s0022g00970.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLTATQPLCLHKSLKINKTQLQKQKQFHRDTKPNLVFPKSSPTPLLINHKPRNHTKLQAL
EALLRDLQASIQDGITVDAQIFSSLLETCFQLQAFDHGIRIHRLIPTSLLRKSVALSSKL
LRLYASIGRIEEAHRLFDQMSRRNRSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVVP
DRFTFPRVLKACGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAKCGDIVKARKVF
DKIVCRDSVSWNSMLTGYIRHGLPLQALSIFRRMLQYGFEPDAVAISTVVTGVPSLKLAG
QIHGWVLRRGVQWNLSIANSLIVLYSNHGKLDQACWLFDHMPERDVVSWNSIISAHRKDL
KAITYFSRMQKADVLPDVVTFVSLLSACAHLGLVKDGEGLFSMMREDYGMIPSMEHYACM
VNLYGRAGLIEEAYEIIEKRMEFEAGPTVWGALLYACYFHHNVDIGKIAAECLFELEPDN
EHNFELLMNIYRNVGRLEDVEKVRKMMADRGFDSLY

Transcript Sequence

Transcript ID

VIT_16s0022g00970.t01
Transcript Infomation

cdna chromosome:12X:16:12533135:12534882:-1 gene:VIT_16s0022g00970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAAAAACAGAAATGCTGACTGCAACACAGCCTCTGTGTCTCCACAAATCTCTGAAAATA
AACAAGACCCAATTGCAAAAGCAAAAACAATTTCATCGAGACACAAAACCCAACCTCGTT
TTCCCGAAATCATCCCCAACGCCACTCTTAATCAATCACAAACCCCGCAATCACACCAAA
CTTCAAGCCCTTGAAGCCCTTCTCCGCGACCTCCAGGCCTCTATACAAGACGGCATTACA
GTCGATGCCCAGATCTTTTCTTCGCTTCTTGAGACTTGTTTCCAATTACAGGCCTTTGAT
CATGGTATCCGAATTCACCGCCTTATACCCACCAGCCTCTTACGTAAAAGTGTTGCTCTT
TCATCCAAGTTGCTTAGGTTGTATGCGTCAATTGGGCGGATCGAGGAAGCCCATCGACTG
TTCGATCAAATGTCTAGGCGAAATCGCTCGGCGTTTGCTTGGAATTCGTTGATATCTGGG
TACGCTGAACTGGGTCTGTATGAAGATGCCATGGCACTTTACTTTCAGATGGAGGAAGAG
GGTGTTGTGCCGGACCGGTTCACGTTTCCACGAGTGTTGAAAGCTTGTGGAGGAATTGGC
TCGATTTCGGTAGGGGAAGAGGTGCACCGGCATGTTGTTCGTTGTGGCTTTGCGGATGAT
GGGTTTGTGCTCAATGCGCTTGTTGACATGTATGCCAAGTGTGGTGACATTGTGAAGGCT
CGTAAGGTGTTTGATAAGATTGTGTGCAGGGACTCGGTTTCGTGGAATTCGATGTTAACA
GGCTACATTCGTCATGGGCTTCCTTTGCAGGCATTGAGCATCTTCCGCCGGATGCTTCAA
TATGGATTTGAGCCGGATGCTGTTGCTATATCTACTGTTGTCACTGGCGTGCCATCACTA
AAACTGGCAGGGCAAATTCATGGATGGGTTCTTCGGCGTGGAGTTCAGTGGAATTTATCT
ATTGCTAATTCTTTGATTGTTCTGTACTCAAATCACGGGAAATTAGATCAAGCTTGTTGG
TTGTTTGATCACATGCCGGAAAGGGATGTTGTGTCATGGAATTCTATAATATCTGCTCAC
CGGAAAGACCTGAAAGCTATAACATATTTTTCACGGATGCAGAAGGCTGATGTGCTGCCA
GATGTGGTTACATTTGTGTCATTACTATCTGCTTGTGCCCATTTAGGTTTGGTTAAGGAT
GGGGAAGGGTTATTTTCAATGATGAGAGAGGACTATGGAATGATTCCAAGCATGGAGCAC
TATGCATGTATGGTGAATCTATATGGAAGAGCAGGATTGATTGAGGAAGCCTATGAAATC
ATTGAGAAGAGAATGGAGTTTGAGGCCGGTCCGACTGTGTGGGGAGCCTTGTTGTATGCT
TGTTACTTTCATCACAATGTAGATATTGGAAAGATAGCTGCAGAGTGTCTTTTTGAGCTG
GAGCCGGATAATGAACATAATTTTGAGCTTTTGATGAATATTTACCGCAATGTGGGTAGA
TTGGAGGATGTAGAGAAAGTGAGAAAAATGATGGCAGATAGAGGATTTGATTCATTATAC
TAATATGAGGGTTTATACAATCAGAACTGTAATTTTAAGGCTGATTGAGAGGAGAAAATC
CAACTTGGGAGCTGGACTATCGACCCATTGAATTGGTATCTCCTTCAACCAGGCACTAAT
ATGACAGAGAATGAGTGTGCTTCTCATTGGTTCTTTCAGAAAATAGATGATTTCAGAATA
TCAACACG