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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0022g00960.t01
CDS Infomation

cds chromosome:12X:16:12517766:12518431:-1 gene:VIT_16s0022g00960 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pectin methylesterase inhibitor [Source:UniProtKB/TrEMBL;Acc:Q9M4H8]
Sequence

ATGGCAAGAGCCTCAGTACTAGTAGTCTTGGTGGTGGTTTCAGTACTTTTGTACACCTCC
AGGGTTGCTGAGTCTGCGGCTGCCAATTCCGGCAGCACTAGTTTCATCAAGGCCAAGTGC
AGTGCCACCCGGTACCCAGCATTGTGCGTCCAATCGCTGTCAGTGTATGCAAGCACAATT
CAGAAAAGCCCGAAGCAGTTGGCTCACACCGCTTTGACGGTGAGCCTAGCCAAGGCTCAG
TCCGCCAAGGCGTTTGTGTCCAAATTGGGTAAGATTAAGGGCATGAAGGCTAGGGAGTTG
GAGGCGGTTCAGGACTGTTTAGAAGAAATGAACGACAGCATCGACCGTCTTTCCCGGTCC
GTACAGGAGCTTGAGGAAGCTGGGAAGAGCAAGGGGCAGGACTTTTTGTGGCACATGAGC
AATGTTGACACTTGGGTCAGCGCTGCCCTAACCGATGATAATACGTGTGTTGATGGATTC
GCTGGTCGGGCCCTGGACGGCAGGGTTAAGGCATCGATTAGGGGTTGGTTGGTTACTGTT
GCGCAAGTCACTAGCAATGCGTTAGCCTTGGTTAACCAATTCGCTGCCAAGAACTGA

Peptide Sequence

PEP ID

VIT_16s0022g00960.t01
PEP Infomation

pep chromosome:12X:16:12517766:12518431:-1 gene:VIT_16s0022g00960 transcript:VIT_16s0022g00960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pectin methylesterase inhibitor [Source:UniProtKB/TrEMBL;Acc:Q9M4H8]
Sequence

MARASVLVVLVVVSVLLYTSRVAESAAANSGSTSFIKAKCSATRYPALCVQSLSVYASTI
QKSPKQLAHTALTVSLAKAQSAKAFVSKLGKIKGMKARELEAVQDCLEEMNDSIDRLSRS
VQELEEAGKSKGQDFLWHMSNVDTWVSAALTDDNTCVDGFAGRALDGRVKASIRGWLVTV
AQVTSNALALVNQFAAKN

Transcript Sequence

Transcript ID

VIT_16s0022g00960.t01
Transcript Infomation

cdna chromosome:12X:16:12517766:12518431:-1 gene:VIT_16s0022g00960 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pectin methylesterase inhibitor [Source:UniProtKB/TrEMBL;Acc:Q9M4H8]
Sequence

ATACAATCATATAATCAGCAAATTTCTTACTGCCCAGAGTCATGGCAAGAGCCTCAGTAC
TAGTAGTCTTGGTGGTGGTTTCAGTACTTTTGTACACCTCCAGGGTTGCTGAGTCTGCGG
CTGCCAATTCCGGCAGCACTAGTTTCATCAAGGCCAAGTGCAGTGCCACCCGGTACCCAG
CATTGTGCGTCCAATCGCTGTCAGTGTATGCAAGCACAATTCAGAAAAGCCCGAAGCAGT
TGGCTCACACCGCTTTGACGGTGAGCCTAGCCAAGGCTCAGTCCGCCAAGGCGTTTGTGT
CCAAATTGGGTAAGATTAAGGGCATGAAGGCTAGGGAGTTGGAGGCGGTTCAGGACTGTT
TAGAAGAAATGAACGACAGCATCGACCGTCTTTCCCGGTCCGTACAGGAGCTTGAGGAAG
CTGGGAAGAGCAAGGGGCAGGACTTTTTGTGGCACATGAGCAATGTTGACACTTGGGTCA
GCGCTGCCCTAACCGATGATAATACGTGTGTTGATGGATTCGCTGGTCGGGCCCTGGACG
GCAGGGTTAAGGCATCGATTAGGGGTTGGTTGGTTACTGTTGCGCAAGTCACTAGCAATG
CGTTAGCCTTGGTTAACCAATTCGCTGCCAAGAACTGAGCCACCAGTTTGGTTGCTCAGT
CGGCAG