Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0022g00670.t01
CDS Infomation

cds chromosome:12X:16:12049399:12054187:1 gene:VIT_16s0022g00670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTGCCTGGCAGAGAACTGCCTTCCATTTCCAGCCTGAGAAGAATTGGATGAATGAT
CCTGACGGACCACTGTTCCACATGGGATGGTACCACCTCTTCTACCAGTACAATCCTGAT
TCAGCAGTGTGGGGGAACATCACGTGGGGCCATGCAGTGTCAAGAGACATGATCCACTGG
CTCTACCTCCCCTTAGCCATGGTCCCCGATCGATGGTTTGATTTGAACGGCGTCTGGACC
GGCTCTGCTACGATTCTGCCAAATGGCCAAATCATAATGCTCTACACCGGTGATACCAAT
GATTCTGTGCAGGTCCAAAATCTAGCATACCCTGCCAACCTGTCTGATCCCCTCCTCCTC
CATTGGATCAAATATGAAAACAATCCGGTTATGGTCCCCCCAGCCGGAATCGGTTCCGAC
GATTTCCGGGACCCGACCACGATGTGGGTCGGAGCCGATGGAAATTGGCGGGTTGCAGTT
GGGTCACTGGTCAATACAACAGGCATCGTGCTTGTATTTCAGACCACCAACTTTACCGAT
TTTGAGCTGTTGGACGGAGAATTGCATGGGGTTCCGGGTACGGGTATGTGGGAGTGCGTG
GACTTTTACCCGGTTTCCATCAATGGCGTATACGGGTTGGATACGTCGGCTCATGGGCCG
GGCATAAAGCATGTGTTGAAGGCCAGCATGGATGATAACAGGCATGATTATTACGCATTA
GGGGAGTATGACCCGATGACCGATACATGGACACCCGATGACCCGGAATTGGATGTGGGT
ATCGGGTTACGGCTTGATTATGGAAAGTATTATGCTTCAAAGACATTTTATGATCAGGTT
AAGAAAAGGAGGATCCTATATGGTTGGATTTCGGAAGGTGATATTGAATCTGATGACTTG
AAGAAAGGATGGGCTTCCCTTCAGAGTATACCAAGGACTGTTCTACATGACAATAAGACA
GGAACCTATCTCCTTCTATGGCCAATTGAGGAGGTAGAGAGCTTGAGAACAAACAGTACA
GAGTTCGAAGATGTTTTACTCGAACCCGGATCTGTTGTGCCACTTGACATAGGCTCAGCT
TCACAGTTGGACATAGTGGCGGAGTTTGAGGTAGATAACGAGACCTTAGAAGCGATGGTG
GAAGCTGATGTGATCTATAATTGTAGTACTAGCGCTGGTGCTGCTGGGAGGGGAGCCTTG
GGGCCATTCGGCATTCTGGTTTTAGCAGATGATACACTTTCCGAGCTGACCCCAATTTAT
TTTTACATTGCCAAAGACACTGATGGCAGTTACAAAACCTTCTTCTGCACTGATCTATCC
AGGTCGTCTTTGGCCGTGGATGATGTTGATCAAAGGATTTATGGGAGCATTGTTCCAGTG
CTTGATGATGAAAAACCAACCATGAGGGTTCTGGTTGATCATTCGATTGTGGAAGGCTTT
AGCCAAGGGGGGAGGTCATGTATCACGACCCGAGTTTATCCAACAGAGGCTATCTATGGA
GCAGCTAGGTTATTCCTCTTCAACAATGCCACTGGAGTGAATGTCACAGCCAGTATCAAG
ATATGGGAAATGGCTTCTGCTGATATTCACCCTTACCCATTAGACCAACCATAA

Peptide Sequence

PEP ID

VIT_16s0022g00670.t01
PEP Infomation

pep chromosome:12X:16:12049399:12054187:1 gene:VIT_16s0022g00670 transcript:VIT_16s0022g00670.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFAWQRTAFHFQPEKNWMNDPDGPLFHMGWYHLFYQYNPDSAVWGNITWGHAVSRDMIHW
LYLPLAMVPDRWFDLNGVWTGSATILPNGQIIMLYTGDTNDSVQVQNLAYPANLSDPLLL
HWIKYENNPVMVPPAGIGSDDFRDPTTMWVGADGNWRVAVGSLVNTTGIVLVFQTTNFTD
FELLDGELHGVPGTGMWECVDFYPVSINGVYGLDTSAHGPGIKHVLKASMDDNRHDYYAL
GEYDPMTDTWTPDDPELDVGIGLRLDYGKYYASKTFYDQVKKRRILYGWISEGDIESDDL
KKGWASLQSIPRTVLHDNKTGTYLLLWPIEEVESLRTNSTEFEDVLLEPGSVVPLDIGSA
SQLDIVAEFEVDNETLEAMVEADVIYNCSTSAGAAGRGALGPFGILVLADDTLSELTPIY
FYIAKDTDGSYKTFFCTDLSRSSLAVDDVDQRIYGSIVPVLDDEKPTMRVLVDHSIVEGF
SQGGRSCITTRVYPTEAIYGAARLFLFNNATGVNVTASIKIWEMASADIHPYPLDQP

Transcript Sequence

Transcript ID

VIT_16s0022g00670.t01
Transcript Infomation

cdna chromosome:12X:16:12049399:12054187:1 gene:VIT_16s0022g00670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GACAGAAACATTGTATATATGATCCAAGGTGCCTCCATGCTCTTACCTTCCCTTGTCCCC
ATTAATAATAGCACATTGCCTCCTTCTCTCCCTCCCCCACTTTCCAACCAAGCTGGACTA
AACCAACCAGCCCCATCCCATCCCCAAACCAAATAAAAAATCCCCAAGAAAAAAAAAAGA
AAATAAAAGAAAATGAATTTCTTCTGCAGGGATAAATAGATCGTTTCTGTTCATGTCCAT
TCACGATTCTCCTCTTCATATCTCTCTATATATGGATAGATAGATAGATCATTTCTCACT
TCCTCTTCTTCCTTCCATTCACTCAATGGACACCCACCATGCTACTTCTCATGATCTTCT
ACATGATGAAGCTTATGCCCCACTCCCCTACTCCCCCCTACCCGACCACCCGGTCCCCGC
CGGAGCTCCGGCTCTGGGGCAGCGCCGTCCCTTGAAGGTTTTTGCTGTCACATTGGCCTC
CCTCATGTTCCTAGCCTCCTTGGTGGCTTTGGTCATTCATCAGAGTCCACAAACCCCGGT
GACAGTGGATAATGACGGGCCGTCTATGGAGAGGGAGGGAAGAGGGGTGGCTCAGGGAGT
GTCGGAGAAGTCTTTCCTGGGATTTTCCGGCCGAAGGCTTTCGTACAATTGGACTACCGC
CATGTTTGCCTGGCAGAGAACTGCCTTCCATTTCCAGCCTGAGAAGAATTGGATGAATGA
TCCTGACGGACCACTGTTCCACATGGGATGGTACCACCTCTTCTACCAGTACAATCCTGA
TTCAGCAGTGTGGGGGAACATCACGTGGGGCCATGCAGTGTCAAGAGACATGATCCACTG
GCTCTACCTCCCCTTAGCCATGGTCCCCGATCGATGGTTTGATTTGAACGGCGTCTGGAC
CGGCTCTGCTACGATTCTGCCAAATGGCCAAATCATAATGCTCTACACCGGTGATACCAA
TGATTCTGTGCAGGTCCAAAATCTAGCATACCCTGCCAACCTGTCTGATCCCCTCCTCCT
CCATTGGATCAAATATGAAAACAATCCGGTTATGGTCCCCCCAGCCGGAATCGGTTCCGA
CGATTTCCGGGACCCGACCACGATGTGGGTCGGAGCCGATGGAAATTGGCGGGTTGCAGT
TGGGTCACTGGTCAATACAACAGGCATCGTGCTTGTATTTCAGACCACCAACTTTACCGA
TTTTGAGCTGTTGGACGGAGAATTGCATGGGGTTCCGGGTACGGGTATGTGGGAGTGCGT
GGACTTTTACCCGGTTTCCATCAATGGCGTATACGGGTTGGATACGTCGGCTCATGGGCC
GGGCATAAAGCATGTGTTGAAGGCCAGCATGGATGATAACAGGCATGATTATTACGCATT
AGGGGAGTATGACCCGATGACCGATACATGGACACCCGATGACCCGGAATTGGATGTGGG
TATCGGGTTACGGCTTGATTATGGAAAGTATTATGCTTCAAAGACATTTTATGATCAGGT
TAAGAAAAGGAGGATCCTATATGGTTGGATTTCGGAAGGTGATATTGAATCTGATGACTT
GAAGAAAGGATGGGCTTCCCTTCAGAGTATACCAAGGACTGTTCTACATGACAATAAGAC
AGGAACCTATCTCCTTCTATGGCCAATTGAGGAGGTAGAGAGCTTGAGAACAAACAGTAC
AGAGTTCGAAGATGTTTTACTCGAACCCGGATCTGTTGTGCCACTTGACATAGGCTCAGC
TTCACAGTTGGACATAGTGGCGGAGTTTGAGGTAGATAACGAGACCTTAGAAGCGATGGT
GGAAGCTGATGTGATCTATAATTGTAGTACTAGCGCTGGTGCTGCTGGGAGGGGAGCCTT
GGGGCCATTCGGCATTCTGGTTTTAGCAGATGATACACTTTCCGAGCTGACCCCAATTTA
TTTTTACATTGCCAAAGACACTGATGGCAGTTACAAAACCTTCTTCTGCACTGATCTATC
CAGGTCGTCTTTGGCCGTGGATGATGTTGATCAAAGGATTTATGGGAGCATTGTTCCAGT
GCTTGATGATGAAAAACCAACCATGAGGGTTCTGGTTGATCATTCGATTGTGGAAGGCTT
TAGCCAAGGGGGGAGGTCATGTATCACGACCCGAGTTTATCCAACAGAGGCTATCTATGG
AGCAGCTAGGTTATTCCTCTTCAACAATGCCACTGGAGTGAATGTCACAGCCAGTATCAA
GATATGGGAAATGGCTTCTGCTGATATTCACCCTTACCCATTAGACCAACCATAATTCTT
CCATCTCCATCCCATCGTAACCTATTTCATTGAGTTCCTCTACATTAGCTCCGTTTGGTT
GCTGAGAAATCCCCCGAGTCCTGTGGCAACCAAACATGGTCTTGCATTATTTAATTCTTG
CGGCAAGGCTGCCATATTCAATCCTTTGTCATGTCCTGGTGTGGTATTTATTCAAAAATT
TTGAGATTTTTGCGAGAGGCAATGCGGCTGGTTGGTTGGAAACTTGGATAGCCTATTCCT
TACCTGCCCAGAAGCTGAGTTTGCATTTCATTGGAGAAAAGCTATTTGGTATTATACTAT
TATGCATGTAGTATTTGATATGATCATTCTATTGCTTGTTCTACTTATGTAAACAATGTC
ATTTATGTAAAAAGAACAAATAATATTTCTTTTCATTACAATTTTTGCTAATATAA