Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0022g00540.t01
CDS Infomation

cds chromosome:12X:16:11683752:11687161:1 gene:VIT_16s0022g00540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCAATGTTAGAACCATTACCAGCAACAAATTATAGGAAGCCACTGGGAATTAGA
TTCTTAGAGCACATTAAGAAGAAAACCCTGTCCTACAAAGCCTACCAGGCCATTGTCCTA
ATTGTGACATTTTTTGCATATGCAAGCTACCATGCTACTCGAAAAACCACAAGCGTTGTC
AAAAGTGCGCTTGATCCTGAATCTGATGTAAGCTTGAAGTTTAGCCCATGGTGGAGAAAG
AATCTTGGCAGACCAGTTTCATGGGCACTGGGAAGTGGATGGGCTCCATTTGATGGAGCA
GATGGTACAGCTTTGCTTGGTGATATCGATGTTGCATTCCTTGGAGTATATGCCATTGGA
ATGTACTTTTCCGGGCACTTGGGCGATAGGTTAAACTTAAGAATCTTTTTGACAGTGGGA
ATGGTAGGAACTGGTTTGTTCACTTCGCTGTATGGTGTGGGTTACTGGGCAAATATCCAT
ATTTTTTACTATTTCTTGATAGATCAGATGTTTGCTGGTTTGTTCCAATCAACTGGATGG
CCCTCAGTAGTTGCTGTGGTAGGCAACTGGTTTGGAAAGAGCAAGAGAGGACTAATTATG
GGGATATGGAATGCTCACACTTCGGTGGGGAACATTGCAGGTTCTGTGATTGCTTCAGTC
CTATTAGCCTATGGGTGGGGATGGTCCTTTGTTGTTCCCGGCCTCATGATTGCTTTTGTT
GGTCTGGTGGTTTTCCTCTTATTGCCTGTTAGTCCTGAATCTGTTGGAGCTGTTGCAGAG
GAAGATCAAGTACACTCTCCCAGGAAAAATGGGGAGGAGGTAACTGAACCTCTATTGCAG
TCGGATACAGAGGTTAAGAAGAAAGCCATAGGGTTCATTGAAGCATGGAAAATTCCTGGA
GTTGCTCCTTTTGCTCTTTGCCTTTTCTTCGCCAAATTGGTTGCTTATACATTTCTTTAT
TGGCTTCCTTTCTACATTAGCCACACAGATATAGATGGCAAGTACTTATCCAGTGAGGCA
GCTGGAAACTTATCTACAGTCTTTGATGTTGGAGGGGTGGTTGGAGGAATTCTAGCTGGC
CATATTTCAGACCGCCTAGGTGCCAGAGCCATAACAGCAGCAAGTTTTATGTACTGTGCT
ATCCCTGCCCTCTTCTTCTACCGAAGCTATGGAAGCATTTCCGTGCCTGTAAATGTAGTG
CTCATGTTCATCACTGGATTGTTTGTGAATGGCCCCTATGCTCTTATAACAACAGCCGTC
TCGGCTGATCTGGGTACCCACAGTTCACTGGAAGGAGATTCAAGGGCATTGGCAACCGTA
ACAGCAATTATAGATGGCACAGGTTCTGTTGGGGCTGCTCTAGGCCCATTACTAACCGGC
TACATCTCTGCCAAGAGCTGGAGTGCAGTTTTTACAATGTTGATGGCATCTGCTCTGGTG
GCAGGCCTACTTTTAACTAGGCTTGTTGTGGCCGAGGTGGCTGCCAAGATCGCAGAATCA
AGACGGCAAGGAGGGCCAACATCAAGATCTCCAGTACCGCTTGAAGTGTGA

Peptide Sequence

PEP ID

VIT_16s0022g00540.t01
PEP Infomation

pep chromosome:12X:16:11683752:11687161:1 gene:VIT_16s0022g00540 transcript:VIT_16s0022g00540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSMLEPLPATNYRKPLGIRFLEHIKKKTLSYKAYQAIVLIVTFFAYASYHATRKTTSVV
KSALDPESDVSLKFSPWWRKNLGRPVSWALGSGWAPFDGADGTALLGDIDVAFLGVYAIG
MYFSGHLGDRLNLRIFLTVGMVGTGLFTSLYGVGYWANIHIFYYFLIDQMFAGLFQSTGW
PSVVAVVGNWFGKSKRGLIMGIWNAHTSVGNIAGSVIASVLLAYGWGWSFVVPGLMIAFV
GLVVFLLLPVSPESVGAVAEEDQVHSPRKNGEEVTEPLLQSDTEVKKKAIGFIEAWKIPG
VAPFALCLFFAKLVAYTFLYWLPFYISHTDIDGKYLSSEAAGNLSTVFDVGGVVGGILAG
HISDRLGARAITAASFMYCAIPALFFYRSYGSISVPVNVVLMFITGLFVNGPYALITTAV
SADLGTHSSLEGDSRALATVTAIIDGTGSVGAALGPLLTGYISAKSWSAVFTMLMASALV
AGLLLTRLVVAEVAAKIAESRRQGGPTSRSPVPLEV

Transcript Sequence

Transcript ID

VIT_16s0022g00540.t01
Transcript Infomation

cdna chromosome:12X:16:11683752:11687161:1 gene:VIT_16s0022g00540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAGCCTCCCTGCTCGTTGGGTTAGCTGCTGGAAAAACCAGAGCAGTGTCTCCACATACG
GTGTTTGATTCAGTTCAAAGAGAGTTATCAGTTTTGGAGGAGGAAATTGAAGCTTTTCGT
TCTAGTTGATCGTTAATTTGGATTAGGCATACATACATGGGTTCAATGTTAGAACCATTA
CCAGCAACAAATTATAGGAAGCCACTGGGAATTAGATTCTTAGAGCACATTAAGAAGAAA
ACCCTGTCCTACAAAGCCTACCAGGCCATTGTCCTAATTGTGACATTTTTTGCATATGCA
AGCTACCATGCTACTCGAAAAACCACAAGCGTTGTCAAAAGTGCGCTTGATCCTGAATCT
GATGTAAGCTTGAAGTTTAGCCCATGGTGGAGAAAGAATCTTGGCAGACCAGTTTCATGG
GCACTGGGAAGTGGATGGGCTCCATTTGATGGAGCAGATGGTACAGCTTTGCTTGGTGAT
ATCGATGTTGCATTCCTTGGAGTATATGCCATTGGAATGTACTTTTCCGGGCACTTGGGC
GATAGGTTAAACTTAAGAATCTTTTTGACAGTGGGAATGGTAGGAACTGGTTTGTTCACT
TCGCTGTATGGTGTGGGTTACTGGGCAAATATCCATATTTTTTACTATTTCTTGATAGAT
CAGATGTTTGCTGGTTTGTTCCAATCAACTGGATGGCCCTCAGTAGTTGCTGTGGTAGGC
AACTGGTTTGGAAAGAGCAAGAGAGGACTAATTATGGGGATATGGAATGCTCACACTTCG
GTGGGGAACATTGCAGGTTCTGTGATTGCTTCAGTCCTATTAGCCTATGGGTGGGGATGG
TCCTTTGTTGTTCCCGGCCTCATGATTGCTTTTGTTGGTCTGGTGGTTTTCCTCTTATTG
CCTGTTAGTCCTGAATCTGTTGGAGCTGTTGCAGAGGAAGATCAAGTACACTCTCCCAGG
AAAAATGGGGAGGAGGTAACTGAACCTCTATTGCAGTCGGATACAGAGGTTAAGAAGAAA
GCCATAGGGTTCATTGAAGCATGGAAAATTCCTGGAGTTGCTCCTTTTGCTCTTTGCCTT
TTCTTCGCCAAATTGGTTGCTTATACATTTCTTTATTGGCTTCCTTTCTACATTAGCCAC
ACAGATATAGATGGCAAGTACTTATCCAGTGAGGCAGCTGGAAACTTATCTACAGTCTTT
GATGTTGGAGGGGTGGTTGGAGGAATTCTAGCTGGCCATATTTCAGACCGCCTAGGTGCC
AGAGCCATAACAGCAGCAAGTTTTATGTACTGTGCTATCCCTGCCCTCTTCTTCTACCGA
AGCTATGGAAGCATTTCCGTGCCTGTAAATGTAGTGCTCATGTTCATCACTGGATTGTTT
GTGAATGGCCCCTATGCTCTTATAACAACAGCCGTCTCGGCTGATCTGGGTACCCACAGT
TCACTGGAAGGAGATTCAAGGGCATTGGCAACCGTAACAGCAATTATAGATGGCACAGGT
TCTGTTGGGGCTGCTCTAGGCCCATTACTAACCGGCTACATCTCTGCCAAGAGCTGGAGT
GCAGTTTTTACAATGTTGATGGCATCTGCTCTGGTGGCAGGCCTACTTTTAACTAGGCTT
GTTGTGGCCGAGGTGGCTGCCAAGATCGCAGAATCAAGACGGCAAGGAGGGCCAACATCA
AGATCTCCAGTACCGCTTGAAGTGTGATTTCTCTGAAGAGTTATAATTAGCTTGTATTGA
ATGTGTGATATTCTCAATGTTTATGAGCAGCCTAGGTTCACCGCCTCTGATTATCAGATG
GGGCGAAGATCTTGTATGTTTAAAGATGGGAGAGGGTGCTTTTTAACCTTCTTCATAGTT
AGTTTGTAAATTGAAGGAAAAGTGAGTCACGTATTTGATTCTACCTATCTATATGTACAT
TTTTCACCCATTTTATCAGTAAAGGGATCACACATCCAGAAGGATGGTTCACGC