Plant GARDEN
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0022g00060.t01
CDS Infomation

cds chromosome:12X:16:10692036:10716413:-1 gene:VIT_16s0022g00060 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein [Source:UniProtKB/TrEMBL;Acc:F6HAI6]
Sequence

ATGTACATAAAGGAGATCTGCTTGGAGGGCTTCAAATCCTACGCCACTCGCACGGTCGTC
CCTGGCTTCGATCCCTACTTCAATGCCATCACGGGCCTTAATGGTTCCGGCAAGTCCAAC
ATTCTTGACTCCATTTGCTTTGTGTTGGGCATTACCAATTTGCAGCAGGTTCGGGCTTCC
AATCTCCAGGAGCTGGTCTATAAGCAAGGCCAAGCTGGGATTACTAAGGCCACCGTGTCG
GTGGTGTTCGATAATTCTGATAGGAGTCGGAGTCCGCTCGGTTACCAGGATTGTCCAGAA
ATTACGGTAACACGGCAGATTGTGGTTGGTGGAAGGAACAAATACCTGATAAATGGACAC
CTTGCCCAGCCTAGTCGAGTTCAAAACCTTTTCCACTCTGTACAGCTCAATGTTAACAAC
CCACATTTTCTCATAATGCAAGGGCGCATCACCAAGGTCTTAAACATGAAACCTCCTGAG
ATTTTATCTATGCTTGAAGAGGCTGCTGGGACAAGAATGTATGAAACAAAGAAAGAGGCT
GCTCTGAAAACACTTGAGAAGAAGCAGAGCAAAGTTGATGAGATTGATAAGCTTCTTGAC
CAGGAGATATTGCCTGCTTTGGAGAAGTTGAGGAAAGAACGGATGCAGTATATGCAATGG
GCTAATGGCAATGCAGAATTAGATCGACTTAAAAGGTTCTGCATTGCCTATGAATTTGTT
CAGGCAGAGAAGATTAGGGACAGTGCAGTCTCTGGGGTTGAACAAGTAAAGACGAAGATT
GCTGATATTGAAGACAGTCACAAAAGGATGCAGGTGGAAATACAGGAAATGGAGACACAA
GTGTCAAACTTGACTGCTGAAAAGGAGGCAAGTATGGGTGGAGAGGTAAAAGTTTTATCA
GAGAATGTAGATGCTCTTTCTCGTGAGCTTGTGAAGCAAGCATCAGTACTGAAAAATCAA
GAAGACACTCTCAAGAGTGAAAAAGAGAATGCTGCAAAGATTGTTAGAGGTATTGAAGAT
TTAAAACAGTCTGTTGAAGAGAGGGCCTCTGCTGTCAAAAGGGCTGAAGATGGGGCGGCT
GATCTAAAACAAAGAGTTGAGGAACTTTCTAAGAATTTGGAAGAGTGTGAAAGAGAGTAC
CAGGGTGTTCTAGCTGGTAAGAGCAGTGGAAGTGAGGAAAAATGCCTTGAAGATCAACTA
GCTGATGCTAAAGTAGCAGTTGGGAGTGCAGAAACAGAATTGAAACAGCTCAACACAAAA
ATAACTCATTGTGAAAAAGATCTGAAAGAGAAAACAAATGAGTTAATATCTAAGCATGAA
GAAGCTGTTTCTGTTGAGAATGAGCTTAATGTGAGGAGAAAGGATGTGGAAAATATCAAA
ATGGCATTGGAATCTCTTACATACAAAGAAGGTCAGATGGAAGCTTTACAAAAGGAACGT
GCTCTTGAGCTGGGCATGGTGCAGGAGTTAAAAGATGAGACAAGGATTCTTTCTGCTCAA
CTGGGAAATGTTCAGTTTACATACCATGACCCATTGAAGAATTTTGATAGGTCAAGGGTG
AAAGGTGTGGTTGCAAAACTAATTAAAGTGAAGGATAGCTCCACAATGACTGCCTTAGAG
GTTGCTGCTGGTGGAAAGTTGTTTAATGTTGTTGTAGACACAGAAAACACTGGAAAACTA
CTGCTTCAAAATGGTGATCTCCGGAGAAGAGTAACGATCATTCCGTTGAACAAAATTCAA
TCCCATACTGTTCCTTTAAGAGTTCAAAAAGAAGCTTCTAGATTGGTTGGTAAGGAGAAT
GCAGAACTGGCTCTTTCTTTGGTTGGATATGATGAGGAACTGAAGAGTGCAATGGAATAT
GTGTTTGGTTCAACCTTTGTTTGTAAAAGGATTGATGCTGCAAAGGAGGTTGCTTTTAAC
AGGGATATCTCCACTCCAAGTGTTACTCTTGATGGTGATATATTTCAACCAAGTGGTCTT
CTGACTGGTGGTAGTCGCAAAGGTGGTGGTGATCTATTGAGGCAACTTCATGCTTTGGCA
GAGGCTGAATCAAAACTTTCAACTCATCAGCAGAAGTTATCAGAAATTGAAGCAAAGATC
GCCGACCTCATGCCTCTTCAGAAGAGGTTCATGGACCTTAAAGCGCGGTTGGAACTTAAG
TCGTATGACCTTTCATTATTTCAGAACAGGGCTGAGCAAAATGAGCATCATAAGCTCAGT
GAACTGGTTAAAAGGATTGAGCAGGAGCTTGGGGAATCAAAGTCAGCTGCTAGAGAAAAG
CAACTTCTGCTTGAAAACTGTATAAATACAGTGTCACTGCTTGAGAAGTCGATCAAAGAG
CATGCTACTAATCGGGCTGGCAGGCTTAAAGATTTAGAGAAGAAGGCAAAGGCTTTAAAG
TCTCAAATGACATCAGCTTCCAAGGACCTCAAGAGGCATGAGAATGAAAAAGAGAGGCTT
ATTATGGAAATGGAAGCAGTCATAGAGGAACGTGCATCTTTGGAGAGTCAACTAACATGT
TTGAGAGGACAAATTGACAGTCTCACATCAGAAGTAGATCAACTTAAGAACAAGGTTTCT
TCAGTAAAGAACAATCATGATCAGGCTCAATCTGAGCTCAATTTGATCCGTTTGAAGATG
AAGGAATGTGATTCTCAAATTAGTTGCATTCTCAAGGAGCAGGAGAAGCTTCAACACAAA
CTCAGTGAGATGAATATTGAAAGGAAGAAGCTGGAAAATGAGGTAAAACGAATGGAGATG
GAACAAAAAGATTGCTCTTCAAAGGTAGAAAAGTTAATTGAGAAGCATGCCTGGATTGCA
TCAGAAAAGCAGCTTTTCGGAAGAAGTGGAACTGATTATGATTTTGCATGCCGTGATCCT
AGTAAAGCCAGGGCTGAACTTGACAAACTGCAAACTGAACAATCAGGCCTGGAGAAAAGG
GTGAATAAGAAAGTTATGGCAATGTTTGAGAAAGCAGAAGATGAGTACAATGAATTAATA
TCCAAGAAAAGCATAATTGAGAATGACAAGTCAAAAATCAAGATGGTGATTGAAGAGCTG
GATGAAAAGAAGAAGGAAACATTAAAGGTTACTTGGACTAAAGTTAACAAGGACTTTGGA
TCCATCTTTTCTACTCTATTACCAGGCACAATGGCAAAGCTGGAACCTCCTGAAGGATGC
AGTTTCTTGGATGGTCTTGAGGTTCGTGTTGCATTTGGAAGTGTTTGGAAACAGTCCTTG
TCAGAATTGAGTGGAGGGCAACGTTCACTGCTTGCACTCTCTCTAATCTTGGCATTGCTC
CTCTTCAAACCAGCTCCACTTTATATTCTGGATGAGGTCGATGCTGCCCTTGATTTAAGT
CACACTCAAAACATTGGAAGAATGATTAAATCCCATTTCCCACATTCCCAGTTCATTGTG
GTTTCTCTTAAAGAAGGCATGTTCAATAATGCCAATGTTCTTTTCCGGACAAAATTTGTG
GATGGTGTTTCCACAGTTCAGAGAACTGTTGCAGCTAAGCAGAACAAGTGA

Peptide Sequence

PEP ID

VIT_16s0022g00060.t01
PEP Infomation

pep chromosome:12X:16:10692036:10716413:-1 gene:VIT_16s0022g00060 transcript:VIT_16s0022g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein [Source:UniProtKB/TrEMBL;Acc:F6HAI6]
Sequence

MYIKEICLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS
NLQELVYKQGQAGITKATVSVVFDNSDRSRSPLGYQDCPEITVTRQIVVGGRNKYLINGH
LAQPSRVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEA
ALKTLEKKQSKVDEIDKLLDQEILPALEKLRKERMQYMQWANGNAELDRLKRFCIAYEFV
QAEKIRDSAVSGVEQVKTKIADIEDSHKRMQVEIQEMETQVSNLTAEKEASMGGEVKVLS
ENVDALSRELVKQASVLKNQEDTLKSEKENAAKIVRGIEDLKQSVEERASAVKRAEDGAA
DLKQRVEELSKNLEECEREYQGVLAGKSSGSEEKCLEDQLADAKVAVGSAETELKQLNTK
ITHCEKDLKEKTNELISKHEEAVSVENELNVRRKDVENIKMALESLTYKEGQMEALQKER
ALELGMVQELKDETRILSAQLGNVQFTYHDPLKNFDRSRVKGVVAKLIKVKDSSTMTALE
VAAGGKLFNVVVDTENTGKLLLQNGDLRRRVTIIPLNKIQSHTVPLRVQKEASRLVGKEN
AELALSLVGYDEELKSAMEYVFGSTFVCKRIDAAKEVAFNRDISTPSVTLDGDIFQPSGL
LTGGSRKGGGDLLRQLHALAEAESKLSTHQQKLSEIEAKIADLMPLQKRFMDLKARLELK
SYDLSLFQNRAEQNEHHKLSELVKRIEQELGESKSAAREKQLLLENCINTVSLLEKSIKE
HATNRAGRLKDLEKKAKALKSQMTSASKDLKRHENEKERLIMEMEAVIEERASLESQLTC
LRGQIDSLTSEVDQLKNKVSSVKNNHDQAQSELNLIRLKMKECDSQISCILKEQEKLQHK
LSEMNIERKKLENEVKRMEMEQKDCSSKVEKLIEKHAWIASEKQLFGRSGTDYDFACRDP
SKARAELDKLQTEQSGLEKRVNKKVMAMFEKAEDEYNELISKKSIIENDKSKIKMVIEEL
DEKKKETLKVTWTKVNKDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSL
SELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIV
VSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQNK

Transcript Sequence

Transcript ID

VIT_16s0022g00060.t01
Transcript Infomation

cdna chromosome:12X:16:10692036:10716413:-1 gene:VIT_16s0022g00060 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein [Source:UniProtKB/TrEMBL;Acc:F6HAI6]
Sequence

TCAGCTCTCCCCCTTAGGGTTTCAATTTCATCCCAATAATGTACATAAAGGAGATCTGCT
TGGAGGGCTTCAAATCCTACGCCACTCGCACGGTCGTCCCTGGCTTCGATCCCTACTTCA
ATGCCATCACGGGCCTTAATGGTTCCGGCAAGTCCAACATTCTTGACTCCATTTGCTTTG
TGTTGGGCATTACCAATTTGCAGCAGGTTCGGGCTTCCAATCTCCAGGAGCTGGTCTATA
AGCAAGGCCAAGCTGGGATTACTAAGGCCACCGTGTCGGTGGTGTTCGATAATTCTGATA
GGAGTCGGAGTCCGCTCGGTTACCAGGATTGTCCAGAAATTACGGTAACACGGCAGATTG
TGGTTGGTGGAAGGAACAAATACCTGATAAATGGACACCTTGCCCAGCCTAGTCGAGTTC
AAAACCTTTTCCACTCTGTACAGCTCAATGTTAACAACCCACATTTTCTCATAATGCAAG
GGCGCATCACCAAGGTCTTAAACATGAAACCTCCTGAGATTTTATCTATGCTTGAAGAGG
CTGCTGGGACAAGAATGTATGAAACAAAGAAAGAGGCTGCTCTGAAAACACTTGAGAAGA
AGCAGAGCAAAGTTGATGAGATTGATAAGCTTCTTGACCAGGAGATATTGCCTGCTTTGG
AGAAGTTGAGGAAAGAACGGATGCAGTATATGCAATGGGCTAATGGCAATGCAGAATTAG
ATCGACTTAAAAGGTTCTGCATTGCCTATGAATTTGTTCAGGCAGAGAAGATTAGGGACA
GTGCAGTCTCTGGGGTTGAACAAGTAAAGACGAAGATTGCTGATATTGAAGACAGTCACA
AAAGGATGCAGGTGGAAATACAGGAAATGGAGACACAAGTGTCAAACTTGACTGCTGAAA
AGGAGGCAAGTATGGGTGGAGAGGTAAAAGTTTTATCAGAGAATGTAGATGCTCTTTCTC
GTGAGCTTGTGAAGCAAGCATCAGTACTGAAAAATCAAGAAGACACTCTCAAGAGTGAAA
AAGAGAATGCTGCAAAGATTGTTAGAGGTATTGAAGATTTAAAACAGTCTGTTGAAGAGA
GGGCCTCTGCTGTCAAAAGGGCTGAAGATGGGGCGGCTGATCTAAAACAAAGAGTTGAGG
AACTTTCTAAGAATTTGGAAGAGTGTGAAAGAGAGTACCAGGGTGTTCTAGCTGGTAAGA
GCAGTGGAAGTGAGGAAAAATGCCTTGAAGATCAACTAGCTGATGCTAAAGTAGCAGTTG
GGAGTGCAGAAACAGAATTGAAACAGCTCAACACAAAAATAACTCATTGTGAAAAAGATC
TGAAAGAGAAAACAAATGAGTTAATATCTAAGCATGAAGAAGCTGTTTCTGTTGAGAATG
AGCTTAATGTGAGGAGAAAGGATGTGGAAAATATCAAAATGGCATTGGAATCTCTTACAT
ACAAAGAAGGTCAGATGGAAGCTTTACAAAAGGAACGTGCTCTTGAGCTGGGCATGGTGC
AGGAGTTAAAAGATGAGACAAGGATTCTTTCTGCTCAACTGGGAAATGTTCAGTTTACAT
ACCATGACCCATTGAAGAATTTTGATAGGTCAAGGGTGAAAGGTGTGGTTGCAAAACTAA
TTAAAGTGAAGGATAGCTCCACAATGACTGCCTTAGAGGTTGCTGCTGGTGGAAAGTTGT
TTAATGTTGTTGTAGACACAGAAAACACTGGAAAACTACTGCTTCAAAATGGTGATCTCC
GGAGAAGAGTAACGATCATTCCGTTGAACAAAATTCAATCCCATACTGTTCCTTTAAGAG
TTCAAAAAGAAGCTTCTAGATTGGTTGGTAAGGAGAATGCAGAACTGGCTCTTTCTTTGG
TTGGATATGATGAGGAACTGAAGAGTGCAATGGAATATGTGTTTGGTTCAACCTTTGTTT
GTAAAAGGATTGATGCTGCAAAGGAGGTTGCTTTTAACAGGGATATCTCCACTCCAAGTG
TTACTCTTGATGGTGATATATTTCAACCAAGTGGTCTTCTGACTGGTGGTAGTCGCAAAG
GTGGTGGTGATCTATTGAGGCAACTTCATGCTTTGGCAGAGGCTGAATCAAAACTTTCAA
CTCATCAGCAGAAGTTATCAGAAATTGAAGCAAAGATCGCCGACCTCATGCCTCTTCAGA
AGAGGTTCATGGACCTTAAAGCGCGGTTGGAACTTAAGTCGTATGACCTTTCATTATTTC
AGAACAGGGCTGAGCAAAATGAGCATCATAAGCTCAGTGAACTGGTTAAAAGGATTGAGC
AGGAGCTTGGGGAATCAAAGTCAGCTGCTAGAGAAAAGCAACTTCTGCTTGAAAACTGTA
TAAATACAGTGTCACTGCTTGAGAAGTCGATCAAAGAGCATGCTACTAATCGGGCTGGCA
GGCTTAAAGATTTAGAGAAGAAGGCAAAGGCTTTAAAGTCTCAAATGACATCAGCTTCCA
AGGACCTCAAGAGGCATGAGAATGAAAAAGAGAGGCTTATTATGGAAATGGAAGCAGTCA
TAGAGGAACGTGCATCTTTGGAGAGTCAACTAACATGTTTGAGAGGACAAATTGACAGTC
TCACATCAGAAGTAGATCAACTTAAGAACAAGGTTTCTTCAGTAAAGAACAATCATGATC
AGGCTCAATCTGAGCTCAATTTGATCCGTTTGAAGATGAAGGAATGTGATTCTCAAATTA
GTTGCATTCTCAAGGAGCAGGAGAAGCTTCAACACAAACTCAGTGAGATGAATATTGAAA
GGAAGAAGCTGGAAAATGAGGTAAAACGAATGGAGATGGAACAAAAAGATTGCTCTTCAA
AGGTAGAAAAGTTAATTGAGAAGCATGCCTGGATTGCATCAGAAAAGCAGCTTTTCGGAA
GAAGTGGAACTGATTATGATTTTGCATGCCGTGATCCTAGTAAAGCCAGGGCTGAACTTG
ACAAACTGCAAACTGAACAATCAGGCCTGGAGAAAAGGGTGAATAAGAAAGTTATGGCAA
TGTTTGAGAAAGCAGAAGATGAGTACAATGAATTAATATCCAAGAAAAGCATAATTGAGA
ATGACAAGTCAAAAATCAAGATGGTGATTGAAGAGCTGGATGAAAAGAAGAAGGAAACAT
TAAAGGTTACTTGGACTAAAGTTAACAAGGACTTTGGATCCATCTTTTCTACTCTATTAC
CAGGCACAATGGCAAAGCTGGAACCTCCTGAAGGATGCAGTTTCTTGGATGGTCTTGAGG
TTCGTGTTGCATTTGGAAGTGTTTGGAAACAGTCCTTGTCAGAATTGAGTGGAGGGCAAC
GTTCACTGCTTGCACTCTCTCTAATCTTGGCATTGCTCCTCTTCAAACCAGCTCCACTTT
ATATTCTGGATGAGGTCGATGCTGCCCTTGATTTAAGTCACACTCAAAACATTGGAAGAA
TGATTAAATCCCATTTCCCACATTCCCAGTTCATTGTGGTTTCTCTTAAAGAAGGCATGT
TCAATAATGCCAATGTTCTTTTCCGGACAAAATTTGTGGATGGTGTTTCCACAGTTCAGA
GAACTGTTGCAGCTAAGCAGAACAAGTGATTTTGCTATCTT