Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0013g02140.t01
CDS Infomation

cds chromosome:12X:16:10106590:10117827:-1 gene:VIT_16s0013g02140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCACAATGAGTCCTCTTCCGTCTCTCCCAGAAAGGTCAGGTTTGCCCCGAAATCA
CCTCCTCGGAGAAAGCCTAAAACTACAGCCCCCCAACCAGTGGTGGCCGAAGAAGAGGAC
GAAGCTAAACGAGCTCAATATCTCTTACGCCGTGTTAATGAGAAGCTCAGGAGACAAGGG
CCTAAAGTTGAAAAGACATCTTCAGTACAAGTTGTGTTTGGTCCTGGAGCCGCTACTCCA
TCAGATACCATAAGGACATTTGGTGTTCATAGGGATGGGAATAGTGATAAGAGCAGTGGA
ATGGAACTGAAAGTTTCTACCCCTGATCATGAGGAAATTGCAGTTTCTTCACCTTCAACC
ACAAAACCGGATGAAACCAATGGATATTTTGCAGATGCTACTGATGATTCAGCTCAGATC
AGGAAAAGATATAAAGAACCTTGGGATTATGTCCACTCTTACTATCCTACTACTCTTCCT
TTGAGAAAGCCTCACTCTGGTGACCCAGAAATTCTGGATGAGGCAGAATTTGGTGAGGCT
TCAACTAACTTGGAATATGATGAGAAAACCATAAATCCTGCTTCAGAACTTGGGCTGTTG
GAGGAGAGTGAGAAAGGAAGGATGTTTTTGTTTCAGCTTCCTGCTAATTTGCCCTTATTT
AAGCAATCACCTAGTGCAAAGGGCAAAGAGATAGTTGAAAATTCAACATCACTGGAAGGC
ATTTATGCTTCTGCAAAGGGGAAACAGGTAGCTAGAAGTTCACTGTCATCAAAAAGCATA
GGTACTTCAGAACATAGCTGCAGGTTGGAAGATTTAGCTGGGGGACATATAGGCAAAATG
CTGGTTTACAAGAGTGGAGCAATCAAGCTGAAGCTGGGAGAAATTCTCTATGATGTTTCA
CCTGGTTTAGATTGTACATGTGTTCAAGATGTGGTGGCGATCAACACAGTAGATAAGCAT
TGTTATGCCCTTGGAGAGCTTGGCAAGCGTGTTATTGTCACTCCTGATGTTGATTCCCTC
CTGGATTCAATGATTGCCTTGGACTAA

Peptide Sequence

PEP ID

VIT_16s0013g02140.t01
PEP Infomation

pep chromosome:12X:16:10106590:10117827:-1 gene:VIT_16s0013g02140 transcript:VIT_16s0013g02140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDHNESSSVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQG
PKVEKTSSVQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKVSTPDHEEIAVSSPST
TKPDETNGYFADATDDSAQIRKRYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFGEA
STNLEYDEKTINPASELGLLEESEKGRMFLFQLPANLPLFKQSPSAKGKEIVENSTSLEG
IYASAKGKQVARSSLSSKSIGTSEHSCRLEDLAGGHIGKMLVYKSGAIKLKLGEILYDVS
PGLDCTCVQDVVAINTVDKHCYALGELGKRVIVTPDVDSLLDSMIALD

Transcript Sequence

Transcript ID

VIT_16s0013g02140.t01
Transcript Infomation

cdna chromosome:12X:16:10106590:10117827:-1 gene:VIT_16s0013g02140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCAGAACTCCCAATCTCCCAACCCTAGGTCCCGAGTTCGAACCTTTTCCTTTTCCACTTT
CTTCTTCGTCTTCCTCCCCTAACCCTGATCTTCATCTTCCTGTTCAAACACTAAATTTCT
GTCAAATTGCAGTTTTCTTTGGAGATCTGTGACCCAAATATCTCACTTCAGTTCTGTAAT
TCTGCTTACGTATAACCCATGGATCACAATGAGTCCTCTTCCGTCTCTCCCAGAAAGGTC
AGGTTTGCCCCGAAATCACCTCCTCGGAGAAAGCCTAAAACTACAGCCCCCCAACCAGTG
GTGGCCGAAGAAGAGGACGAAGCTAAACGAGCTCAATATCTCTTACGCCGTGTTAATGAG
AAGCTCAGGAGACAAGGGCCTAAAGTTGAAAAGACATCTTCAGTACAAGTTGTGTTTGGT
CCTGGAGCCGCTACTCCATCAGATACCATAAGGACATTTGGTGTTCATAGGGATGGGAAT
AGTGATAAGAGCAGTGGAATGGAACTGAAAGTTTCTACCCCTGATCATGAGGAAATTGCA
GTTTCTTCACCTTCAACCACAAAACCGGATGAAACCAATGGATATTTTGCAGATGCTACT
GATGATTCAGCTCAGATCAGGAAAAGATATAAAGAACCTTGGGATTATGTCCACTCTTAC
TATCCTACTACTCTTCCTTTGAGAAAGCCTCACTCTGGTGACCCAGAAATTCTGGATGAG
GCAGAATTTGGTGAGGCTTCAACTAACTTGGAATATGATGAGAAAACCATAAATCCTGCT
TCAGAACTTGGGCTGTTGGAGGAGAGTGAGAAAGGAAGGATGTTTTTGTTTCAGCTTCCT
GCTAATTTGCCCTTATTTAAGCAATCACCTAGTGCAAAGGGCAAAGAGATAGTTGAAAAT
TCAACATCACTGGAAGGCATTTATGCTTCTGCAAAGGGGAAACAGGTAGCTAGAAGTTCA
CTGTCATCAAAAAGCATAGGTACTTCAGAACATAGCTGCAGGTTGGAAGATTTAGCTGGG
GGACATATAGGCAAAATGCTGGTTTACAAGAGTGGAGCAATCAAGCTGAAGCTGGGAGAA
ATTCTCTATGATGTTTCACCTGGTTTAGATTGTACATGTGTTCAAGATGTGGTGGCGATC
AACACAGTAGATAAGCATTGTTATGCCCTTGGAGAGCTTGGCAAGCGTGTTATTGTCACT
CCTGATGTTGATTCCCTCCTGGATTCAATGATTGCCTTGGACTAACTGTAATAAGGTTGT
AGATAATGTGACGGCATTTAGGATTCCTAATGAACCGTCAAGGCAGCAGGTTTGCATGGT
GTATACATGAATTTGAAGTTCCTGCACTAGTATGCCACTTGATTCCCCATATGACACAAA
ATCCCTTTTATGTACATATAGCAGGTTCACATTCTGGACCTGTCATATTCACTAGACAAT
ATTGAGCAAAATGTGCAAAA