Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_16s0013g00180.t01
CDS Infomation	cds chromosome:12X:16:5068577:5070069:-1 gene:VIT_16s0013g00180 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:D7U734]
Sequence	ATGGCTACGAAAATGACACACACTGCTTTTCCAGCCGCAGCCTCTATGGTGTTCTTCTTC CTCGTCCTCCCGTCGACTGTGCTTGCGGATGATCCCCAAATCCCTGACGATGCAATTCAA CTAGCTTCATGGTTCAACGATGTCATCCAGAGCCATAACCTCCGGCGGACGACTCTTGAT CCGGTCCTAGTGAAGGCGGAGGAGAGGGTAAAAATCATCAAGGTAAGTAAAGGTGGTGGA GGAAACTTCAATAAGGTGATGGCGGCGGTCGATAGTGTTCCAGCTGGTAACACTCAACGC GTAATTATATGGATTGGAGGTGGAGTATATGAAGAGAAAATCAAGATTGATAGGAGTAAA CCATTTATAACATTCTATGGATCGCCGGACGACATGCCGATGCTGTCATTTGATGGGACG GCTGCCAAGTTCGGGACAGTGGACAGTGCCACGCTAATAGTGGAATCAGATTACTTCATG GCGGTTAACATAATAGTCATTAACTCGTCCCCGAGGCCGGAAGGGAGAAGGAACGGAGGG CAGGCGGTGGCAGTGAGGGTGTCGGGTGATAAGGCCGCGTTTTATAACTGCAAGCTGGTC GGTTTTCAGGACACCCTATGTGATGATAGAGGCAGGCATTTTTTCCATGGATGCTACATT GAAGGCACTGTGGACTTCATATTTGGAAGTGGCAAGTCTCTCTATTTGAGCACTGAGCTA CATGCCAAGGGAGCTGGTGGCGAATTTTCAGTGATCACAGCGCAGGCGAGGAAACTTGAA TCAGAGGACAATGGATACTCTTTCGTCCACTGCAGGGTGTCGGGTAGTGGCAGCAACACT TACTTAGGGCGGGCATGGATGAGTAGACCGAGGGTGGTGTTTTCATACACCAACATGAGC ACTGTTGTCCACCCTTTAGGCTGGTCCGATAACTTCCACCCTGAACGCGACTCATTGGTT TTCTATGGAGAATACAAGTGTATGGGGCCAGGAGCAAACACATCCAAACGAGCAAAATTC GCGAAGATGCTAGACGATGATGGGGTGAGACCCTTCGTCACCCTCAACTACATTGAAGCT TCAAAATGGTTGCTTCCTCCGCCACGCCTTGTACCCCGCGGAAAGAGATACGAATTGGTA TATAGCAAATGGATGATGACGAGGTACTCCGTGCAGAACAATATTCTTGTTTAA

Peptide Sequence

PEP ID	VIT_16s0013g00180.t01
PEP Infomation	pep chromosome:12X:16:5068577:5070069:-1 gene:VIT_16s0013g00180 transcript:VIT_16s0013g00180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:D7U734]
Sequence	MATKMTHTAFPAAASMVFFFLVLPSTVLADDPQIPDDAIQLASWFNDVIQSHNLRRTTLD PVLVKAEERVKIIKVSKGGGGNFNKVMAAVDSVPAGNTQRVIIWIGGGVYEEKIKIDRSK PFITFYGSPDDMPMLSFDGTAAKFGTVDSATLIVESDYFMAVNIIVINSSPRPEGRRNGG QAVAVRVSGDKAAFYNCKLVGFQDTLCDDRGRHFFHGCYIEGTVDFIFGSGKSLYLSTEL HAKGAGGEFSVITAQARKLESEDNGYSFVHCRVSGSGSNTYLGRAWMSRPRVVFSYTNMS TVVHPLGWSDNFHPERDSLVFYGEYKCMGPGANTSKRAKFAKMLDDDGVRPFVTLNYIEA SKWLLPPPRLVPRGKRYELVYSKWMMTRYSVQNNILV

Transcript Sequence

Transcript ID	VIT_16s0013g00180.t01
Transcript Infomation	cdna chromosome:12X:16:5068577:5070069:-1 gene:VIT_16s0013g00180 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:D7U734]
Sequence	ATGGCTACGAAAATGACACACACTGCTTTTCCAGCCGCAGCCTCTATGGTGTTCTTCTTC CTCGTCCTCCCGTCGACTGTGCTTGCGGATGATCCCCAAATCCCTGACGATGCAATTCAA CTAGCTTCATGGTTCAACGATGTCATCCAGAGCCATAACCTCCGGCGGACGACTCTTGAT CCGGTCCTAGTGAAGGCGGAGGAGAGGGTAAAAATCATCAAGGTAAGTAAAGGTGGTGGA GGAAACTTCAATAAGGTGATGGCGGCGGTCGATAGTGTTCCAGCTGGTAACACTCAACGC GTAATTATATGGATTGGAGGTGGAGTATATGAAGAGAAAATCAAGATTGATAGGAGTAAA CCATTTATAACATTCTATGGATCGCCGGACGACATGCCGATGCTGTCATTTGATGGGACG GCTGCCAAGTTCGGGACAGTGGACAGTGCCACGCTAATAGTGGAATCAGATTACTTCATG GCGGTTAACATAATAGTCATTAACTCGTCCCCGAGGCCGGAAGGGAGAAGGAACGGAGGG CAGGCGGTGGCAGTGAGGGTGTCGGGTGATAAGGCCGCGTTTTATAACTGCAAGCTGGTC GGTTTTCAGGACACCCTATGTGATGATAGAGGCAGGCATTTTTTCCATGGATGCTACATT GAAGGCACTGTGGACTTCATATTTGGAAGTGGCAAGTCTCTCTATTTGAGCACTGAGCTA CATGCCAAGGGAGCTGGTGGCGAATTTTCAGTGATCACAGCGCAGGCGAGGAAACTTGAA TCAGAGGACAATGGATACTCTTTCGTCCACTGCAGGGTGTCGGGTAGTGGCAGCAACACT TACTTAGGGCGGGCATGGATGAGTAGACCGAGGGTGGTGTTTTCATACACCAACATGAGC ACTGTTGTCCACCCTTTAGGCTGGTCCGATAACTTCCACCCTGAACGCGACTCATTGGTT TTCTATGGAGAATACAAGTGTATGGGGCCAGGAGCAAACACATCCAAACGAGCAAAATTC GCGAAGATGCTAGACGATGATGGGGTGAGACCCTTCGTCACCCTCAACTACATTGAAGCT TCAAAATGGTTGCTTCCTCCGCCACGCCTTGTACCCCGCGGAAAGAGATACGAATTGGTA TATAGCAAATGGATGATGACGAGGTACTCCGTGCAGAACAATATTCTTGTTTAA