Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0048g02730.t01
CDS Infomation

cds chromosome:12X:15:16867611:16876297:1 gene:VIT_15s0048g02730 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome biogenesis regulatory protein [Source:UniProtKB/TrEMBL;Acc:D7U817]
Sequence

ATGGGTACACAAGAGCATCAGATCGACCTAGGTCACCTTCTGGCCTTCGACCCACTTCAC
CACTTCCCTTCTCCCCCCTCTTCCAGGGAAGAGCTAGTGAAGGAGTGTTTACAAAAGGGC
ACTGAGCTAGTCCAATCAATCGCAGACACCCTTTTCAACTTACCTTCAACCGAAGACATA
GATGGCCCCTTAGTCAAGTTGCCTCCGCCGACGACAAGATTGCCTAGAGAAAAGCATCTG
CCTAAGCCTAAACCACCTACAAAATGGGAGTTGTTTGCCAAAGCTAAAGGTATAAAGAAC
CGCAAAAAAGATAAAATCGTTTACGATGAGCAAACTGGTACTTGGAAGCGTCGCCATGGA
TATGATCGTGTAAATGATGATGAAGATATACCTATTATTGAGGCCAAAATGACTGATGAA
GCAGGAGAGGATCCTTTTGCTAAGAGACGAGCAGAAAAGAAGAAACGAGTTGAAAAACAA
GGGAAGAATCGGTTACAGAATCTCAAACAAGCTGCAAAAGTTGGTGCTTTGCCAAGCCAC
ATTCAACTTGCTGCCACAGCCTTACCTATTACTGGAACCCAAACTGCCCCAAAGAAAGTC
AGCAAAAATGAACTTGAGGATGTAGCCAGCATGGCCGCCACTGCAACAGCCAGTGGTGGG
AAATTTGACAAGAAGTTGCCTGGAGAAAAACCTGAAAAACATAAAGGAAAGTATCGCAAG
TTCCTGCCGGTAGTGGAAGGGACAGGAATTGGATCACTAGAGAAGCAGCAAACTGAAAAA
ATTTTGAACAAGCTAATCTCCAAGAATTCCCATGAGATACTCAATGTTGACAAGGCTATT
AACATGTACAATGTGAAGAAAGAGAAGAAAAGAAAGAATCGACAGGGGAAGGATTCATCA
ACTTCAAGCAAGTTGAAACCAAAGAAGCAACTTCAGAAGAAGTCATTAAAGAAAGGAACT
TCCAAGAAAGGGAAGTCAAAATGA

Peptide Sequence

PEP ID

VIT_15s0048g02730.t01
PEP Infomation

pep chromosome:12X:15:16867611:16876297:1 gene:VIT_15s0048g02730 transcript:VIT_15s0048g02730.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome biogenesis regulatory protein [Source:UniProtKB/TrEMBL;Acc:D7U817]
Sequence

MGTQEHQIDLGHLLAFDPLHHFPSPPSSREELVKECLQKGTELVQSIADTLFNLPSTEDI
DGPLVKLPPPTTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHG
YDRVNDDEDIPIIEAKMTDEAGEDPFAKRRAEKKKRVEKQGKNRLQNLKQAAKVGALPSH
IQLAATALPITGTQTAPKKVSKNELEDVASMAATATASGGKFDKKLPGEKPEKHKGKYRK
FLPVVEGTGIGSLEKQQTEKILNKLISKNSHEILNVDKAINMYNVKKEKKRKNRQGKDSS
TSSKLKPKKQLQKKSLKKGTSKKGKSK

Transcript Sequence

Transcript ID

VIT_15s0048g02730.t01
Transcript Infomation

cdna chromosome:12X:15:16867611:16876297:1 gene:VIT_15s0048g02730 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome biogenesis regulatory protein [Source:UniProtKB/TrEMBL;Acc:D7U817]
Sequence

AAAACCAGTTGCCTCTTCTTCTACCTCTTCTTCTCGGCGGTCGATCAAAGCATAATCCTA
AAGCCGAGAGGAGGTGCTGGAGCGACGGAGATGGGTACACAAGAGCATCAGATCGACCTA
GGTCACCTTCTGGCCTTCGACCCACTTCACCACTTCCCTTCTCCCCCCTCTTCCAGGGAA
GAGCTAGTGAAGGAGTGTTTACAAAAGGGCACTGAGCTAGTCCAATCAATCGCAGACACC
CTTTTCAACTTACCTTCAACCGAAGACATAGATGGCCCCTTAGTCAAGTTGCCTCCGCCG
ACGACAAGATTGCCTAGAGAAAAGCATCTGCCTAAGCCTAAACCACCTACAAAATGGGAG
TTGTTTGCCAAAGCTAAAGGTATAAAGAACCGCAAAAAAGATAAAATCGTTTACGATGAG
CAAACTGGTACTTGGAAGCGTCGCCATGGATATGATCGTGTAAATGATGATGAAGATATA
CCTATTATTGAGGCCAAAATGACTGATGAAGCAGGAGAGGATCCTTTTGCTAAGAGACGA
GCAGAAAAGAAGAAACGAGTTGAAAAACAAGGGAAGAATCGGTTACAGAATCTCAAACAA
GCTGCAAAAGTTGGTGCTTTGCCAAGCCACATTCAACTTGCTGCCACAGCCTTACCTATT
ACTGGAACCCAAACTGCCCCAAAGAAAGTCAGCAAAAATGAACTTGAGGATGTAGCCAGC
ATGGCCGCCACTGCAACAGCCAGTGGTGGGAAATTTGACAAGAAGTTGCCTGGAGAAAAA
CCTGAAAAACATAAAGGAAAGTATCGCAAGTTCCTGCCGGTAGTGGAAGGGACAGGAATT
GGATCACTAGAGAAGCAGCAAACTGAAAAAATTTTGAACAAGCTAATCTCCAAGAATTCC
CATGAGATACTCAATGTTGACAAGGCTATTAACATGTACAATGTGAAGAAAGAGAAGAAA
AGAAAGAATCGACAGGGGAAGGATTCATCAACTTCAAGCAAGTTGAAACCAAAGAAGCAA
CTTCAGAAGAAGTCATTAAAGAAAGGAACTTCCAAGAAAGGGAAGTCAAAATGAATGTAG
TATTTATGTTCAAAAGGTGAAGAAAAGGAATTTTTTTTCATTTTTTTTCTCTCTCCTGTA
CTTCGGTCTTCCCTAGTTTATGGATTACATTATTACATAAAACTTACATATCGGCTGACC
TATTTGATAAAAAGTTATAACATACTTCCTACTCATCAATTTTTATT