Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_15s0048g02600.t01
CDS Infomation	cds chromosome:12X:15:16729965:16734102:1 gene:VIT_15s0048g02600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:D7U828]
Sequence	ATGGCAACTGTGACAGCTTCAAACTTCCTACCAAGAAGCTCAAATGGTAACTGTGGAGCA ACTTGTAGGATAGAGAAGAAGGCGACATTGACAAAACTCAGGCCGAAGATTCAGATCTTA GCTCATAATGGGTTAAGGGCTTTGAACAGTGTAGATGAGCTGCATCAGAGGACCACAATA AAAGTCACAAGGAAAGGTAGCAGGAAAGGGTTCAAGAATGAGAATCCCAGGCCGTGGGGA GGCATTATTTGTGGATGTGGTATGAGCTTGATATTTGTTGGAACAGAGGTAGGTCCATGG AGCAAAACTGGTGGACTTGGCGATGTTCTTGGAGGTCTGCCCCCAGCAATGTCAGCCAAT GGACACCGTGTTATGACTGTTTCTCCACGTTTCGACCAGTACAAAGATGCATGGGATACA GGTGTCACAGTTCAGCTAAATGTAGGGGATAGATTTGAAAAGGTTCGCTTCTTCCACTGC TACAAGAGAGGAGTTGATCGTGTATTTGTGGATCACCCCTGGTTTCTTGAGAAGGTATGG GGGAAAACTGGATCAAAACTCTATGGCCCTTTAGCTGGAGAGGATTTCCAGGATAACCAA CTTCGATTTAGCTTATTATGCCAGGCAGCTCTGGAAGCACCTAGGATTTTGAATCTTAAA AGCAGTAAATATTTCTCTGGACCATATGGTGAAGATGTTGTTTTCATTGCTAATGATTGG CACACTGCCCCCCTAGCCTGCTACTTGAAGACCATGTACAGACTCAAAGGGAGATATGGA AATGCCAAGGTTGTTTTCTGCATTCACAACATAGCCTACCAAGGCAGATTTGCCTTTGCA GACTTCTCGCTTCTCAATCTCCCAGATGAATTCAAAAGCTCTTTCGACTTCACAGATGGG TATGAAAAACCTGTGAAGGGAAGGAAAATCAACTGGATGAAAGCAGGAATACTAGAAGCA GATAAGGTCTTAACTGTTAGCCCATACTATGCCAAGGAGCTAGTTTCTGGTGTAGAAAAA GGAGTGGAATTGGATAACATCCTTCGCAGAACGGGCATCACAGGAATCATTAATGGCATG GACGTCCAGGAGTGGAACCCGTTAACTGACAAATATATATCTATCAAATATGATGCTTCA ACAGTGAAGGAGGCAAAGCTTCTTCTGAAGGAAGCCCTACAAGCAGAAGCTGGGTTGCCA GTGGATAGAAATATCCCTGTCATAGGCTTCATTGGTAGACTAGAAGAGCAAAAAGGCTCA GATATTCTAGTAGCTGCTATTCCACAATTCGTCACAGCGAATGTTCAGATAATAGTCCTT GGGACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTGGAGAAGAAGTACCCTGAC AATGCCCGAGGAGTGGCGAAATTCAATGTTCCCCTTGCCCACATGATAATAGCCGGTGCT GATTTCTTACTGGTTCCAAGTAGATTCGAGCCGTGTGGTCTCATTCAATTACATGCCATG AGATATGGAACTGTGCCCATTGTTGCCTCGACAGGTGGGCTGGTTGATACTGTCAAAGAA GGCTTTACGGGATTCCAGATGGGAAGTTTCAGTGTGGAATGTGACGCTGTGGATCCTGCA GATGCGACTGCAGTAGCAACCTCTGTCAAGAGGGCCCTTGCAACCTATGGCACCCCAGCT TTAACCGAAATGGTACAAAATTGCATGGCTCAAGATCTTTCCTGGAAGGGACCTGCCAAG AAGTGGGAAGAGGTGCTGCTGAGCCTGGGGGTTCCTGGCAGCGAACCTGGAATTGATGGT GAAGAGATTGCTCCTCTTTCAAAGGAAAATGTTGCCACTCCCTGA

Peptide Sequence

PEP ID	VIT_15s0048g02600.t01
PEP Infomation	pep chromosome:12X:15:16729965:16734102:1 gene:VIT_15s0048g02600 transcript:VIT_15s0048g02600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:D7U828]
Sequence	MATVTASNFLPRSSNGNCGATCRIEKKATLTKLRPKIQILAHNGLRALNSVDELHQRTTI KVTRKGSRKGFKNENPRPWGGIICGCGMSLIFVGTEVGPWSKTGGLGDVLGGLPPAMSAN GHRVMTVSPRFDQYKDAWDTGVTVQLNVGDRFEKVRFFHCYKRGVDRVFVDHPWFLEKVW GKTGSKLYGPLAGEDFQDNQLRFSLLCQAALEAPRILNLKSSKYFSGPYGEDVVFIANDW HTAPLACYLKTMYRLKGRYGNAKVVFCIHNIAYQGRFAFADFSLLNLPDEFKSSFDFTDG YEKPVKGRKINWMKAGILEADKVLTVSPYYAKELVSGVEKGVELDNILRRTGITGIINGM DVQEWNPLTDKYISIKYDASTVKEAKLLLKEALQAEAGLPVDRNIPVIGFIGRLEEQKGS DILVAAIPQFVTANVQIIVLGTGKKPMEKQLEQLEKKYPDNARGVAKFNVPLAHMIIAGA DFLLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFSVECDAVDPA DATAVATSVKRALATYGTPALTEMVQNCMAQDLSWKGPAKKWEEVLLSLGVPGSEPGIDG EEIAPLSKENVATP

Transcript Sequence

Transcript ID	VIT_15s0048g02600.t01
Transcript Infomation	cdna chromosome:12X:15:16729965:16734102:1 gene:VIT_15s0048g02600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:D7U828]
Sequence	TTCTTGGTTTTTCAAGCATCTTACCTTCTGTGAACTCTGTTTTCTTTGTACTTTGAACAA AAAGTCAGTGATGGCAACTGTGACAGCTTCAAACTTCCTACCAAGAAGCTCAAATGGTAA CTGTGGAGCAACTTGTAGGATAGAGAAGAAGGCGACATTGACAAAACTCAGGCCGAAGAT TCAGATCTTAGCTCATAATGGGTTAAGGGCTTTGAACAGTGTAGATGAGCTGCATCAGAG GACCACAATAAAAGTCACAAGGAAAGGTAGCAGGAAAGGGTTCAAGAATGAGAATCCCAG GCCGTGGGGAGGCATTATTTGTGGATGTGGTATGAGCTTGATATTTGTTGGAACAGAGGT AGGTCCATGGAGCAAAACTGGTGGACTTGGCGATGTTCTTGGAGGTCTGCCCCCAGCAAT GTCAGCCAATGGACACCGTGTTATGACTGTTTCTCCACGTTTCGACCAGTACAAAGATGC ATGGGATACAGGTGTCACAGTTCAGCTAAATGTAGGGGATAGATTTGAAAAGGTTCGCTT CTTCCACTGCTACAAGAGAGGAGTTGATCGTGTATTTGTGGATCACCCCTGGTTTCTTGA GAAGGTATGGGGGAAAACTGGATCAAAACTCTATGGCCCTTTAGCTGGAGAGGATTTCCA GGATAACCAACTTCGATTTAGCTTATTATGCCAGGCAGCTCTGGAAGCACCTAGGATTTT GAATCTTAAAAGCAGTAAATATTTCTCTGGACCATATGGTGAAGATGTTGTTTTCATTGC TAATGATTGGCACACTGCCCCCCTAGCCTGCTACTTGAAGACCATGTACAGACTCAAAGG GAGATATGGAAATGCCAAGGTTGTTTTCTGCATTCACAACATAGCCTACCAAGGCAGATT TGCCTTTGCAGACTTCTCGCTTCTCAATCTCCCAGATGAATTCAAAAGCTCTTTCGACTT CACAGATGGGTATGAAAAACCTGTGAAGGGAAGGAAAATCAACTGGATGAAAGCAGGAAT ACTAGAAGCAGATAAGGTCTTAACTGTTAGCCCATACTATGCCAAGGAGCTAGTTTCTGG TGTAGAAAAAGGAGTGGAATTGGATAACATCCTTCGCAGAACGGGCATCACAGGAATCAT TAATGGCATGGACGTCCAGGAGTGGAACCCGTTAACTGACAAATATATATCTATCAAATA TGATGCTTCAACAGTGAAGGAGGCAAAGCTTCTTCTGAAGGAAGCCCTACAAGCAGAAGC TGGGTTGCCAGTGGATAGAAATATCCCTGTCATAGGCTTCATTGGTAGACTAGAAGAGCA AAAAGGCTCAGATATTCTAGTAGCTGCTATTCCACAATTCGTCACAGCGAATGTTCAGAT AATAGTCCTTGGGACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTGGAGAAGAA GTACCCTGACAATGCCCGAGGAGTGGCGAAATTCAATGTTCCCCTTGCCCACATGATAAT AGCCGGTGCTGATTTCTTACTGGTTCCAAGTAGATTCGAGCCGTGTGGTCTCATTCAATT ACATGCCATGAGATATGGAACTGTGCCCATTGTTGCCTCGACAGGTGGGCTGGTTGATAC TGTCAAAGAAGGCTTTACGGGATTCCAGATGGGAAGTTTCAGTGTGGAATGTGACGCTGT GGATCCTGCAGATGCGACTGCAGTAGCAACCTCTGTCAAGAGGGCCCTTGCAACCTATGG CACCCCAGCTTTAACCGAAATGGTACAAAATTGCATGGCTCAAGATCTTTCCTGGAAGGG ACCTGCCAAGAAGTGGGAAGAGGTGCTGCTGAGCCTGGGGGTTCCTGGCAGCGAACCTGG AATTGATGGTGAAGAGATTGCTCCTCTTTCAAAGGAAAATGTTGCCACTCCCTGAGGGTC AATATAATTTGCATCATCAACCTCAATTCATTCATTTGTCGTCCATCATCAGCATTCTTA GGAGGCTATTCAGGGTGGCTTTTACCAAGATCCTATAGAACCAATAAGCACTCTCCCCCA CCCACCCACTCAACCCCGGTTTGGCCGGGCCTTGTAGCTTGAGGAGCATTATACACAAGA AAATTATATATT