Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0048g02490.t01
CDS Infomation

cds chromosome:12X:15:16662968:16665173:1 gene:VIT_15s0048g02490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCCTTCAGCAGAAGAGAAACAGAGCAGCAGGCTATGCCATGAGGATGGTGATGTA
GAGCCCTGCTCCTACGCCATGCAATTGGTGACTTCGTCTGTGTTGCCCATGGTTATGCAG
ACCTCCATTGAGCTAGGCCTTTTTGATATCATTGCCAACTTGGGTCAGGCCTCTGCCTCA
GAAATAGCTTCCCGGCTGCCTACAAAGAACCAAGAGGCACCCATCATCCTGGATCGTATG
CTCTACCTTCTTACCACTCACTCTGTTCTCAGTTGCTCTGCCATTGATGGTGATGAGAGG
GTGTACGCACTCACACCTGTCTCCAAATACTTTGCCAGTAATCAAGGAGTTTCCTTCGGC
CCACTACTGGCTTTGATCCAGGACAAGGTCTTCATGGATAGCTGGTCCCAACTGAAAAAT
GCGATTATTGAAGGAGGAATACCATTTAACAGGGTCCATGGATCTCATGCATTTGAGTAC
CCTGGCAAGGACCCCAGATTCAATCAGGTTTTCAACACAGCAATGTTCAACCACACAACG
GTAATTGTTAATAAGATCCTTGAGTCCTACAAGGGTTTTGAGCACCTTACGCGGGTGGTC
GATGTTGGTGGCGGTCTGGGAACCACCCTTAGCATAATCACATCCAAATACCCCCATATT
GAGGCTATTAATTTTGACTTGCCTCATGTTATAGAACATGCTGTGGCGTATCCTGGTGTG
AAACACATTGGAGGGGATATGTTTGTAAGTGTTCCCAAAGGAGATGCCATTTTTATGAAG
TGGATACTTCATGATTGGAGTGATGATCACTGCTTAAAGTTGTTGAAGAACTGCTACAAA
GCTCTACCAGAGCATGGGAAGGTGATTGTTGTGGAGGGGGTTCTTCCAGAAATACCGGAA
AAGGGATCTACCGTGAAAGCTATCTGCCAAACAGATTTGATAATGTTGACTCAAAACCCT
GGAGGAAAGGAGAGGACAAGGAAGGAGTTCCTGGACTTGACAATTGGAGCTGGATTTGCT
GGCATCAGATATGAATGCTATGTCTCTTGTTATTGGGTTATGGAAATCTTCAAGTAA

Peptide Sequence

PEP ID

VIT_15s0048g02490.t01
PEP Infomation

pep chromosome:12X:15:16662968:16665173:1 gene:VIT_15s0048g02490 transcript:VIT_15s0048g02490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEPSAEEKQSSRLCHEDGDVEPCSYAMQLVTSSVLPMVMQTSIELGLFDIIANLGQASAS
EIASRLPTKNQEAPIILDRMLYLLTTHSVLSCSAIDGDERVYALTPVSKYFASNQGVSFG
PLLALIQDKVFMDSWSQLKNAIIEGGIPFNRVHGSHAFEYPGKDPRFNQVFNTAMFNHTT
VIVNKILESYKGFEHLTRVVDVGGGLGTTLSIITSKYPHIEAINFDLPHVIEHAVAYPGV
KHIGGDMFVSVPKGDAIFMKWILHDWSDDHCLKLLKNCYKALPEHGKVIVVEGVLPEIPE
KGSTVKAICQTDLIMLTQNPGGKERTRKEFLDLTIGAGFAGIRYECYVSCYWVMEIFK

Transcript Sequence

Transcript ID

VIT_15s0048g02490.t01
Transcript Infomation

cdna chromosome:12X:15:16662968:16665173:1 gene:VIT_15s0048g02490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATCATCACGGAGGAATAGAGTGAGAGAAAGGGAAAGTTGTTTACCAAGCAGAGCCAATA
ATGGAGCCTTCAGCAGAAGAGAAACAGAGCAGCAGGCTATGCCATGAGGATGGTGATGTA
GAGCCCTGCTCCTACGCCATGCAATTGGTGACTTCGTCTGTGTTGCCCATGGTTATGCAG
ACCTCCATTGAGCTAGGCCTTTTTGATATCATTGCCAACTTGGGTCAGGCCTCTGCCTCA
GAAATAGCTTCCCGGCTGCCTACAAAGAACCAAGAGGCACCCATCATCCTGGATCGTATG
CTCTACCTTCTTACCACTCACTCTGTTCTCAGTTGCTCTGCCATTGATGGTGATGAGAGG
GTGTACGCACTCACACCTGTCTCCAAATACTTTGCCAGTAATCAAGGAGTTTCCTTCGGC
CCACTACTGGCTTTGATCCAGGACAAGGTCTTCATGGATAGCTGGTCCCAACTGAAAAAT
GCGATTATTGAAGGAGGAATACCATTTAACAGGGTCCATGGATCTCATGCATTTGAGTAC
CCTGGCAAGGACCCCAGATTCAATCAGGTTTTCAACACAGCAATGTTCAACCACACAACG
GTAATTGTTAATAAGATCCTTGAGTCCTACAAGGGTTTTGAGCACCTTACGCGGGTGGTC
GATGTTGGTGGCGGTCTGGGAACCACCCTTAGCATAATCACATCCAAATACCCCCATATT
GAGGCTATTAATTTTGACTTGCCTCATGTTATAGAACATGCTGTGGCGTATCCTGGTGTG
AAACACATTGGAGGGGATATGTTTGTAAGTGTTCCCAAAGGAGATGCCATTTTTATGAAG
TGGATACTTCATGATTGGAGTGATGATCACTGCTTAAAGTTGTTGAAGAACTGCTACAAA
GCTCTACCAGAGCATGGGAAGGTGATTGTTGTGGAGGGGGTTCTTCCAGAAATACCGGAA
AAGGGATCTACCGTGAAAGCTATCTGCCAAACAGATTTGATAATGTTGACTCAAAACCCT
GGAGGAAAGGAGAGGACAAGGAAGGAGTTCCTGGACTTGACAATTGGAGCTGGATTTGCT
GGCATCAGATATGAATGCTATGTCTCTTGTTATTGGGTTATGGAAATCTTCAAGTAAACA
ACATATGGTTAATTTTCATGGTACTGTTTGCAATTGTTTAGGAAACAACTTTGCAAAAGG
GAATAACTCTGTAATGGTTCTGTTTTATGCAATTAGTGTTTGGAGTATGATCAACCAAAG
TAACTTTAATCAATAATGCAGATGCTTCAGTTCGTGTATTCA