Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0048g01880.t01
CDS Infomation

cds chromosome:12X:15:16013630:16015423:1 gene:VIT_15s0048g01880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTAGAAGATGGCGGAGATGAGTTTTTGGCTGATAACCAATCAGCAGATAAGTTGTTA
GCTCGTGCGCAAGAGCTCGTTCCAGTGGCTCTTGATAATTCCAGGGAGGTTAAGGGGTTC
CTGGGTAGATGGAAGATGATAATTTCGAAGTTGGAGCAGATCCCATCATGCTTGTCAGAC
TTGTCGAGCCATCCTTGCTTCTCGAAGAACACACTCTGTAAGGAGCAATTGCAGGCAGTA
TTGAGGACTTTGAAAGAAACAATTGAATTGGCGGAGCTATGCATTAAGGAGAAATATGAA
GGGAAGCTTCGGATGCAGAGTGATCTTGATGGATTGATTGGGAAATTGGATTTGAATTTG
CGGGACTGTGGGCTCTTGGTGAAGACTGGGGTGCTCGGTGAGGCTATGATGCCTTTAACT
GTGGCTGGTTCATCAGCAGAACCAGAGGCTGGCACTCATTCCAATATAAGGGAGTTTCTT
GCCCGCCTTCAGATCGGGCACTTGGAGGCCAAGCATAAAGCTCTTGACAGCCTTGTTGAA
GTAATGAAAGAGGATGAGAAGAATGTGTTGGCTGTTCTGGGACGTAGCAACATCGCTGCT
TTGGTTCAATTACTCACTGCAACTTCCCCTCGAATCCGGGAGAAGACAGTAACTGTCATA
TGCTCACTTGCAGAATCAGGGAGTTGTGAGAATTGGCTTGTTTCGGAAGGTGTTCTTCCA
CCTCTGATAAGGCTTGTTGAGTCTGGTAGTGCTGTCGGTAAAGAGAAGGCCACAATTTCG
CTCCAGAGATTATCAATGTCAGCTGAAACAGCCCGTTCAATTGTTGGGCATGGTGGGGTT
CGCCCGCTGATTGAGATCTGTCAAACCAGTGATTCTGTCTCACAAGCTGCAGCTGCTAGC
ACCTTGAAGAATTTATCGGTTGTACCAGAGGTTCGACAGACCCTCGCTGAAGAAGGGATT
ATAAAGGTTATGATCAATCTCCTTGATTGTGGAATATTATTAGGATCTAAAGAATATGCT
GCAGAATGCTTGCAGAACCTCACTGCAAGCAATGAAAACCTTCGAAGGTCTGTTATCACT
GAGGGTGGAGTTCGGAGCCTGTTGGCTTACCTAGACGGTCCCTTGCCCCAAGAATCTGCA
GTTGGGGCATTAAGGAATTTGGTGGGCTCAGTTTCTATGGAAGTTTTGGTTTCTCTTGGT
TTCCTTCCCCGTTTGGTTCATGTACTTAAATCTGGATCCTTGGGCGCACAGCAAGCTGCT
GCATCAGCCATCTGTCGGGTTTGCAGCTCAACAGAAATGAAGAAACTGGTAGGTGAAGCA
GGGTGCATTCCTCTGCTTGTGAAGATGCTGGAGGCCAAGACAAACAGTGTAAGAGAGGTT
GCTTCACAGGCACTTTCAGGCCTGGTGGCCATTTCACAGAATTGCAAAGAAGTTAAGAGG
GGTGATAAAAGTGTGCCAAATTTGGTCCAGTTGCTTGACCCAAGTCCACAAAACACTGCA
AAAAAGTATGCCGTTTCCTGCCTCGCAGCTCTCTCTTCAAGTAAGAAATGTAAGAAGCTC
ATGATCTCATATGGAGCAATTGGGTATCTCAAGAAGCTTAATGAGATGGACATTCCTGGT
GCCAAGAAGCTACTTGAGCGATTGGAAAGGGGGAAACTGAGAAGTTTGTTCACCAGAAAA
TAG

Peptide Sequence

PEP ID

VIT_15s0048g01880.t01
PEP Infomation

pep chromosome:12X:15:16013630:16015423:1 gene:VIT_15s0048g01880 transcript:VIT_15s0048g01880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVEDGGDEFLADNQSADKLLARAQELVPVALDNSREVKGFLGRWKMIISKLEQIPSCLSD
LSSHPCFSKNTLCKEQLQAVLRTLKETIELAELCIKEKYEGKLRMQSDLDGLIGKLDLNL
RDCGLLVKTGVLGEAMMPLTVAGSSAEPEAGTHSNIREFLARLQIGHLEAKHKALDSLVE
VMKEDEKNVLAVLGRSNIAALVQLLTATSPRIREKTVTVICSLAESGSCENWLVSEGVLP
PLIRLVESGSAVGKEKATISLQRLSMSAETARSIVGHGGVRPLIEICQTSDSVSQAAAAS
TLKNLSVVPEVRQTLAEEGIIKVMINLLDCGILLGSKEYAAECLQNLTASNENLRRSVIT
EGGVRSLLAYLDGPLPQESAVGALRNLVGSVSMEVLVSLGFLPRLVHVLKSGSLGAQQAA
ASAICRVCSSTEMKKLVGEAGCIPLLVKMLEAKTNSVREVASQALSGLVAISQNCKEVKR
GDKSVPNLVQLLDPSPQNTAKKYAVSCLAALSSSKKCKKLMISYGAIGYLKKLNEMDIPG
AKKLLERLERGKLRSLFTRK

Transcript Sequence

Transcript ID

VIT_15s0048g01880.t01
Transcript Infomation

cdna chromosome:12X:15:16013630:16015423:1 gene:VIT_15s0048g01880 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCATACAGAAATCATGGTAGAAGATGGCGGAGATGAGTTTTTGGCTGATAACCAATCAGC
AGATAAGTTGTTAGCTCGTGCGCAAGAGCTCGTTCCAGTGGCTCTTGATAATTCCAGGGA
GGTTAAGGGGTTCCTGGGTAGATGGAAGATGATAATTTCGAAGTTGGAGCAGATCCCATC
ATGCTTGTCAGACTTGTCGAGCCATCCTTGCTTCTCGAAGAACACACTCTGTAAGGAGCA
ATTGCAGGCAGTATTGAGGACTTTGAAAGAAACAATTGAATTGGCGGAGCTATGCATTAA
GGAGAAATATGAAGGGAAGCTTCGGATGCAGAGTGATCTTGATGGATTGATTGGGAAATT
GGATTTGAATTTGCGGGACTGTGGGCTCTTGGTGAAGACTGGGGTGCTCGGTGAGGCTAT
GATGCCTTTAACTGTGGCTGGTTCATCAGCAGAACCAGAGGCTGGCACTCATTCCAATAT
AAGGGAGTTTCTTGCCCGCCTTCAGATCGGGCACTTGGAGGCCAAGCATAAAGCTCTTGA
CAGCCTTGTTGAAGTAATGAAAGAGGATGAGAAGAATGTGTTGGCTGTTCTGGGACGTAG
CAACATCGCTGCTTTGGTTCAATTACTCACTGCAACTTCCCCTCGAATCCGGGAGAAGAC
AGTAACTGTCATATGCTCACTTGCAGAATCAGGGAGTTGTGAGAATTGGCTTGTTTCGGA
AGGTGTTCTTCCACCTCTGATAAGGCTTGTTGAGTCTGGTAGTGCTGTCGGTAAAGAGAA
GGCCACAATTTCGCTCCAGAGATTATCAATGTCAGCTGAAACAGCCCGTTCAATTGTTGG
GCATGGTGGGGTTCGCCCGCTGATTGAGATCTGTCAAACCAGTGATTCTGTCTCACAAGC
TGCAGCTGCTAGCACCTTGAAGAATTTATCGGTTGTACCAGAGGTTCGACAGACCCTCGC
TGAAGAAGGGATTATAAAGGTTATGATCAATCTCCTTGATTGTGGAATATTATTAGGATC
TAAAGAATATGCTGCAGAATGCTTGCAGAACCTCACTGCAAGCAATGAAAACCTTCGAAG
GTCTGTTATCACTGAGGGTGGAGTTCGGAGCCTGTTGGCTTACCTAGACGGTCCCTTGCC
CCAAGAATCTGCAGTTGGGGCATTAAGGAATTTGGTGGGCTCAGTTTCTATGGAAGTTTT
GGTTTCTCTTGGTTTCCTTCCCCGTTTGGTTCATGTACTTAAATCTGGATCCTTGGGCGC
ACAGCAAGCTGCTGCATCAGCCATCTGTCGGGTTTGCAGCTCAACAGAAATGAAGAAACT
GGTAGGTGAAGCAGGGTGCATTCCTCTGCTTGTGAAGATGCTGGAGGCCAAGACAAACAG
TGTAAGAGAGGTTGCTTCACAGGCACTTTCAGGCCTGGTGGCCATTTCACAGAATTGCAA
AGAAGTTAAGAGGGGTGATAAAAGTGTGCCAAATTTGGTCCAGTTGCTTGACCCAAGTCC
ACAAAACACTGCAAAAAAGTATGCCGTTTCCTGCCTCGCAGCTCTCTCTTCAAGTAAGAA
ATGTAAGAAGCTCATGATCTCATATGGAGCAATTGGGTATCTCAAGAAGCTTAATGAGAT
GGACATTCCTGGTGCCAAGAAGCTACTTGAGCGATTGGAAAGGGGGAAACTGAGAAGTTT
GTTCACCAGAAAATAGAGAGAGATGCAAATGTGTTGTATAATGAAGTATTTTTTTCCCCT
CCTATGATCAATGTTTCATTGTCTGTATGAAACAAAGTAATTAATGATTTGATA