Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0048g01790.t01
CDS Infomation

cds chromosome:12X:15:15965410:15970201:1 gene:VIT_15s0048g01790 gene_biotype:protein_coding transcript_biotype:protein_coding description:rRNA adenine N(6)-methyltransferase [Source:UniProtKB/TrEMBL;Acc:D7U7K6]
Sequence

ATGCCTTCCCTTCTGCTGCATCATCTCCCGCCAACTCCACTTTCCACAACCATCAAAATC
AGGTCTCATCCAAAACCTTCATCCCTCGTGCAAGGTAGCACCCGAACTCCCCTGTGTATA
ACGTGCGCCCGAAGCCAAGATGATTACCACGCCACGCTCGATGCTCTCAACTCCAAAGGC
CGCACTCCCAGAAAATCTCTCGGCCAGCATTACATGTTGAATTCTTCCATAAATGAGCAA
CTTGCTGACACTGCGGATATTAGGGATGGTGATGTGATCCTTGAGATTGGACCCGGAACT
GGTTCTTTGACTAATGTTCTTCTAGATGCGGGTGCAACTGTTCTTGCAATTGAGAAGGAT
GCACACATGGCCGCACTTGTGAGAGAAAGGTTTGCAGTTACAGACCGTCTCAAGGTTTTG
CAAGAGGACTTCATGAAATGCCATATTCACCCTCATTTGTTCTCATTGTTGGAAAGCAAA
AAAGCAAAGAACAAAGAATCAAGATATGCAAAAGTAGTCTCCAATATACCTTTTAATATA
AGCACGGATGTAGTAAAAATACTTCTTCCCATGGGGGACATCTTTTCAGAGGTTGTTCTC
TTACTTCAGGATGAGACAGCTTTGCGGTTGGTCGAAGCATCTTTGCGGACACAAGAGTAC
CGTCCCATAAATATTTTTGTTAATTTTTATTCAGATCCTGAATACAAATTTAAGGTCCCT
AGGACAAATTTTTTCCCCCAACCTAATGTTGATGCAGCTGTTGTTGTATTCAAGCTGAAG
CAAGCGGTGGACTATCCACCGGTTTCCTCCATTAAAAGTTTCTTCTCACTGGTTAATTCA
GCATTCAATGGAAAACGAAAGATGTTGCGGAGATCACTTCAGCACATATGCACATCCATT
GAGATTGAAGAGGCTCTCAGAAATGTTGGCCTTCCAGCTACATCTAGACCCGAAGAGCTT
ACCTTAGATGATTTCGTGAGGTTGCATAATTTAATTGTAAAAACCTAG

Peptide Sequence

PEP ID

VIT_15s0048g01790.t01
PEP Infomation

pep chromosome:12X:15:15965410:15970201:1 gene:VIT_15s0048g01790 transcript:VIT_15s0048g01790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:rRNA adenine N(6)-methyltransferase [Source:UniProtKB/TrEMBL;Acc:D7U7K6]
Sequence

MPSLLLHHLPPTPLSTTIKIRSHPKPSSLVQGSTRTPLCITCARSQDDYHATLDALNSKG
RTPRKSLGQHYMLNSSINEQLADTADIRDGDVILEIGPGTGSLTNVLLDAGATVLAIEKD
AHMAALVRERFAVTDRLKVLQEDFMKCHIHPHLFSLLESKKAKNKESRYAKVVSNIPFNI
STDVVKILLPMGDIFSEVVLLLQDETALRLVEASLRTQEYRPINIFVNFYSDPEYKFKVP
RTNFFPQPNVDAAVVVFKLKQAVDYPPVSSIKSFFSLVNSAFNGKRKMLRRSLQHICTSI
EIEEALRNVGLPATSRPEELTLDDFVRLHNLIVKT

Transcript Sequence

Transcript ID

VIT_15s0048g01790.t01
Transcript Infomation

cdna chromosome:12X:15:15965410:15970201:1 gene:VIT_15s0048g01790 gene_biotype:protein_coding transcript_biotype:protein_coding description:rRNA adenine N(6)-methyltransferase [Source:UniProtKB/TrEMBL;Acc:D7U7K6]
Sequence

ATGCCTTCCCTTCTGCTGCATCATCTCCCGCCAACTCCACTTTCCACAACCATCAAAATC
AGGTCTCATCCAAAACCTTCATCCCTCGTGCAAGGTAGCACCCGAACTCCCCTGTGTATA
ACGTGCGCCCGAAGCCAAGATGATTACCACGCCACGCTCGATGCTCTCAACTCCAAAGGC
CGCACTCCCAGAAAATCTCTCGGCCAGCATTACATGTTGAATTCTTCCATAAATGAGCAA
CTTGCTGACACTGCGGATATTAGGGATGGTGATGTGATCCTTGAGATTGGACCCGGAACT
GGTTCTTTGACTAATGTTCTTCTAGATGCGGGTGCAACTGTTCTTGCAATTGAGAAGGAT
GCACACATGGCCGCACTTGTGAGAGAAAGGTTTGCAGTTACAGACCGTCTCAAGGTTTTG
CAAGAGGACTTCATGAAATGCCATATTCACCCTCATTTGTTCTCATTGTTGGAAAGCAAA
AAAGCAAAGAACAAAGAATCAAGATATGCAAAAGTAGTCTCCAATATACCTTTTAATATA
AGCACGGATGTAGTAAAAATACTTCTTCCCATGGGGGACATCTTTTCAGAGGTTGTTCTC
TTACTTCAGGATGAGACAGCTTTGCGGTTGGTCGAAGCATCTTTGCGGACACAAGAGTAC
CGTCCCATAAATATTTTTGTTAATTTTTATTCAGATCCTGAATACAAATTTAAGGTCCCT
AGGACAAATTTTTTCCCCCAACCTAATGTTGATGCAGCTGTTGTTGTATTCAAGCTGAAG
CAAGCGGTGGACTATCCACCGGTTTCCTCCATTAAAAGTTTCTTCTCACTGGTTAATTCA
GCATTCAATGGAAAACGAAAGATGTTGCGGAGATCACTTCAGCACATATGCACATCCATT
GAGATTGAAGAGGCTCTCAGAAATGTTGGCCTTCCAGCTACATCTAGACCCGAAGAGCTT
ACCTTAGATGATTTCGTGAGGTTGCATAATTTAATTGTAAAAACCTAGTCCTTCCAACCT
CCTCCTCAGAAGGCCAACTTCATGCTTACTCCCAGAACACCATCTCAGTCCCTGATCTTC
ATCACTTATGATTCAGACCAGGAACTCAACAAAGAAAAGAAATCCTACAATCT