Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0048g01410.t01
CDS Infomation

cds chromosome:12X:15:15541609:15564871:-1 gene:VIT_15s0048g01410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTTGATTTCTGGGATTTTGATGGGGACGATCTTTGGGATCGCATTGATGGCGGGG
TGGGTTCATATGATGAGATACCGGAGCATCAAGCGCGTTGCCAAGGCAGTTGATATAAAA
CTCCTTGGATCCCTTAACAGAGAAGATTTGAAGAAAATTTGTGGTGATAATTTTCCTGAA
TGGATATCTTTCCCTGTGTATGAACAGGTGAAATGGCTCAACAAGCAACTTACCAAATTA
TGGCCATTTGTTGCAGATGCAGCAACATTGGTAATTAGAGAATCTGTTGAGCCCCTTCTG
GAAGACTACCGGCCTCCAGGAATTACTTCATTAAAGTTCAGTAAGCTCTCTCTTGGAAAT
GTGGCACCCAAGATTGAAGGAATTCGTGTTCAAAGCCTTAAGAAAGGGCAAATTATAATG
GATATCGACTTGCGATGGGGTGGTGATCCAAGCATTATTTTAGCTGTTGAAGCTGCTCTT
GTTGCTTCAATACCCATTCAGTTGAAGGATCTCCAAGTTTTCACTGTTGCTCGTGTTATC
TTCCAACTTGCAGAAGAGATACCTTGTATTTCTGCTGTTATTGTTGCTCTACTTTCTGAG
CCAAAGCCAAGAATTGATTATACTCTGAAGGCTGTTGGTGGAAGTTTAACAGCTCTCCCT
GGAATTTCAGATATGATTGATGATACTGTGAATACCATTATCACAGATATGCTCCAATGG
CCCCACAGGATTGTTGTTCCAATTGGTGGTATGCCTGTGGATACAAGTGAACTAGAGCTA
AAACCACAAGGGAAGCTTACTTTGACAATAGTAAAAGCAAATGATCTGAAGAACATGGAA
ATGATTGGAAAATCTGATCCGTATGTAGTTGTACATATTCGGCCACTATTCAAAATTAAA
ACAAAGGTTATTGAAAACAACCTGAATCCTGTTTGGAATCAAACATTTGAGTTGATTGCG
GAAGATAAGGAGACACAATCGCTAATCCTTGAGGTTATTGACAAGGACATCACACAAGAT
AAGCGGTTGGGCATAGCAAAGCTACCTTTGAATGATCTGGAAGCTGAAAACCCAAAAGAG
ATTGAACTGAGACTGCTTCCGTCACTTGATATGCTTAAGATAAAAGATAAGAAGGATAGA
GGAACCATCACCATTAAGGTTTTGTATCATGCATTTAACAAGGAGGAGCAAATGGCAGCT
CTAGAAGAAGAGAAGAGAATCCTAGAGGAGAGAAAGAAACTGAAAGAAGCAGGAGTCATA
GGGAGCACAATGGATGCACTTGATGGAGCAGCATCGCTGGTCGGGTCTGGAATTGGCCTT
GTAGGCAGTGGAGTTGGCGCTGGAGTTGGGCTTGTGGGCACCGGCCTTGGGGCTGGAGTT
GGGATTGTGGGAAGCGGCCTTGGAGCTGTAGGCAGCGGTCTGAGCAAAGCCGGAAAGTTC
ATGGGCAGGAGCATCACCGGCCAATCTAGCAGCAACAAGAGGAATGGCAGCACAACTCCA
GTGAACAACACCCAAGAAAATGGCGGTGTGAAGCCAACATAG

Peptide Sequence

PEP ID

VIT_15s0048g01410.t01
PEP Infomation

pep chromosome:12X:15:15541609:15564871:-1 gene:VIT_15s0048g01410 transcript:VIT_15s0048g01410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGLISGILMGTIFGIALMAGWVHMMRYRSIKRVAKAVDIKLLGSLNREDLKKICGDNFPE
WISFPVYEQVKWLNKQLTKLWPFVADAATLVIRESVEPLLEDYRPPGITSLKFSKLSLGN
VAPKIEGIRVQSLKKGQIIMDIDLRWGGDPSIILAVEAALVASIPIQLKDLQVFTVARVI
FQLAEEIPCISAVIVALLSEPKPRIDYTLKAVGGSLTALPGISDMIDDTVNTIITDMLQW
PHRIVVPIGGMPVDTSELELKPQGKLTLTIVKANDLKNMEMIGKSDPYVVVHIRPLFKIK
TKVIENNLNPVWNQTFELIAEDKETQSLILEVIDKDITQDKRLGIAKLPLNDLEAENPKE
IELRLLPSLDMLKIKDKKDRGTITIKVLYHAFNKEEQMAALEEEKRILEERKKLKEAGVI
GSTMDALDGAASLVGSGIGLVGSGVGAGVGLVGTGLGAGVGIVGSGLGAVGSGLSKAGKF
MGRSITGQSSSNKRNGSTTPVNNTQENGGVKPT

Transcript Sequence

Transcript ID

VIT_15s0048g01410.t01
Transcript Infomation

cdna chromosome:12X:15:15541609:15564871:-1 gene:VIT_15s0048g01410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAGAAAGGAAAAGGGATACTTCAAAAACACAAGAGTAACGGATCATCCCTCATTCTTC
AATTCCACTTTTGGAGTGAACTATAGGAACATGGGTTTGATTTCTGGGATTTTGATGGGG
ACGATCTTTGGGATCGCATTGATGGCGGGGTGGGTTCATATGATGAGATACCGGAGCATC
AAGCGCGTTGCCAAGGCAGTTGATATAAAACTCCTTGGATCCCTTAACAGAGAAGATTTG
AAGAAAATTTGTGGTGATAATTTTCCTGAATGGATATCTTTCCCTGTGTATGAACAGGTG
AAATGGCTCAACAAGCAACTTACCAAATTATGGCCATTTGTTGCAGATGCAGCAACATTG
GTAATTAGAGAATCTGTTGAGCCCCTTCTGGAAGACTACCGGCCTCCAGGAATTACTTCA
TTAAAGTTCAGTAAGCTCTCTCTTGGAAATGTGGCACCCAAGATTGAAGGAATTCGTGTT
CAAAGCCTTAAGAAAGGGCAAATTATAATGGATATCGACTTGCGATGGGGTGGTGATCCA
AGCATTATTTTAGCTGTTGAAGCTGCTCTTGTTGCTTCAATACCCATTCAGTTGAAGGAT
CTCCAAGTTTTCACTGTTGCTCGTGTTATCTTCCAACTTGCAGAAGAGATACCTTGTATT
TCTGCTGTTATTGTTGCTCTACTTTCTGAGCCAAAGCCAAGAATTGATTATACTCTGAAG
GCTGTTGGTGGAAGTTTAACAGCTCTCCCTGGAATTTCAGATATGATTGATGATACTGTG
AATACCATTATCACAGATATGCTCCAATGGCCCCACAGGATTGTTGTTCCAATTGGTGGT
ATGCCTGTGGATACAAGTGAACTAGAGCTAAAACCACAAGGGAAGCTTACTTTGACAATA
GTAAAAGCAAATGATCTGAAGAACATGGAAATGATTGGAAAATCTGATCCGTATGTAGTT
GTACATATTCGGCCACTATTCAAAATTAAAACAAAGGTTATTGAAAACAACCTGAATCCT
GTTTGGAATCAAACATTTGAGTTGATTGCGGAAGATAAGGAGACACAATCGCTAATCCTT
GAGGTTATTGACAAGGACATCACACAAGATAAGCGGTTGGGCATAGCAAAGCTACCTTTG
AATGATCTGGAAGCTGAAAACCCAAAAGAGATTGAACTGAGACTGCTTCCGTCACTTGAT
ATGCTTAAGATAAAAGATAAGAAGGATAGAGGAACCATCACCATTAAGGTTTTGTATCAT
GCATTTAACAAGGAGGAGCAAATGGCAGCTCTAGAAGAAGAGAAGAGAATCCTAGAGGAG
AGAAAGAAACTGAAAGAAGCAGGAGTCATAGGGAGCACAATGGATGCACTTGATGGAGCA
GCATCGCTGGTCGGGTCTGGAATTGGCCTTGTAGGCAGTGGAGTTGGCGCTGGAGTTGGG
CTTGTGGGCACCGGCCTTGGGGCTGGAGTTGGGATTGTGGGAAGCGGCCTTGGAGCTGTA
GGCAGCGGTCTGAGCAAAGCCGGAAAGTTCATGGGCAGGAGCATCACCGGCCAATCTAGC
AGCAACAAGAGGAATGGCAGCACAACTCCAGTGAACAACACCCAAGAAAATGGCGGTGTG
AAGCCAACATAGTGCCAAAGTCTGAATTTCATCCATCCTCTGCACACTATAATAATTAGA
TTGAAATTAAGTTATTTGTGGGTTCTTCTTTTTCGCTTCCATCCTCCCCAATGTCAATTC
TATTTGCTAGTTTGGAATCAAATGACATAAAATATCAGTTGCTTTCAGCTGTGTAGCATC
CTGAATCCCACTTTGTGTTAATGTGTTAATACCTAAAAAATCAACCT