Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0048g01270.t01
CDS Infomation

cds chromosome:12X:15:15406740:15424210:-1 gene:VIT_15s0048g01270 gene_biotype:protein_coding transcript_biotype:protein_coding description:MADS-box protein 3 [Source:UniProtKB/TrEMBL;Acc:Q8LLR1]
Sequence

ATGGGGAGAGGAAGAGTGGAGCTGAAGAGGATAGAGAACAAGATCAACCGTCAAGTTACC
TTCTCCAAACGCAGAAATGGTCTGCTCAAGAAGGCCTATGAACTTTCTGTGCTTTGTGAT
GCTGAGGTTGCTCTCATCATCTTCTCTAGCCGCGGCAAGCTCTATGAGTTTGGCAGTGCT
GGTACTACCAAAACCCTAGAGCGGTATCAACGCGTCTGCTACACTCCTCAAGACAACAAT
ATGGAATGTGAAACACAGAGTTGGTACCAAGAGGTGTCAAAGTTAAAGGCAAAATATGAA
TCTCTCCAGCGCACCCAAAGGCATTTGCTTGGAGAAGATCTTGGACCGCTGAGTGTCAAA
GAACTGCAAAATCTTGAGAAACAGCTTGAAGGAGCTCTAGCACAAGCTAGGCAAAGGAAG
ACCCAAATGATGATAGAACAAATGGAAGACCTTCGCAGGAAGGAGCGACAGCTTGGGGAT
CTAAACAAACAGCTCAAACTTAAGCTTGAGGCCGAGGGACAAAGTCTTAAAGCCATTCAA
GGTTCATGGAACCCCAGTACTGCAACTGCTGGAAACAGCAGCTTCCCTGTGCATCCTTCC
CAATCTAACCCAATGGACTGCGAACCCGAACCCATCTTGCAAATTGGGTACCATCACTAT
GTTCCAGCAGAAGGGCCGTCTGTTTCAAAGAGCATGGCTGGTGAGAGCAACTTCATCCAA
GGGTGGGTTCTTTGA

Peptide Sequence

PEP ID

VIT_15s0048g01270.t01
PEP Infomation

pep chromosome:12X:15:15406740:15424210:-1 gene:VIT_15s0048g01270 transcript:VIT_15s0048g01270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:MADS-box protein 3 [Source:UniProtKB/TrEMBL;Acc:Q8LLR1]
Sequence

MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVK
ELQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLNKQLKLKLEAEGQSLKAIQ
GSWNPSTATAGNSSFPVHPSQSNPMDCEPEPILQIGYHHYVPAEGPSVSKSMAGESNFIQ
GWVL

Transcript Sequence

Transcript ID

VIT_15s0048g01270.t01
Transcript Infomation

cdna chromosome:12X:15:15406740:15424210:-1 gene:VIT_15s0048g01270 gene_biotype:protein_coding transcript_biotype:protein_coding description:MADS-box protein 3 [Source:UniProtKB/TrEMBL;Acc:Q8LLR1]
Sequence

GAGAGAGAGAGAGAATGGGGAGAGGAAGAGTGGAGCTGAAGAGGATAGAGAACAAGATCA
ACCGTCAAGTTACCTTCTCCAAACGCAGAAATGGTCTGCTCAAGAAGGCCTATGAACTTT
CTGTGCTTTGTGATGCTGAGGTTGCTCTCATCATCTTCTCTAGCCGCGGCAAGCTCTATG
AGTTTGGCAGTGCTGGTACTACCAAAACCCTAGAGCGGTATCAACGCGTCTGCTACACTC
CTCAAGACAACAATATGGAATGTGAAACACAGAGTTGGTACCAAGAGGTGTCAAAGTTAA
AGGCAAAATATGAATCTCTCCAGCGCACCCAAAGGCATTTGCTTGGAGAAGATCTTGGAC
CGCTGAGTGTCAAAGAACTGCAAAATCTTGAGAAACAGCTTGAAGGAGCTCTAGCACAAG
CTAGGCAAAGGAAGACCCAAATGATGATAGAACAAATGGAAGACCTTCGCAGGAAGGAGC
GACAGCTTGGGGATCTAAACAAACAGCTCAAACTTAAGCTTGAGGCCGAGGGACAAAGTC
TTAAAGCCATTCAAGGTTCATGGAACCCCAGTACTGCAACTGCTGGAAACAGCAGCTTCC
CTGTGCATCCTTCCCAATCTAACCCAATGGACTGCGAACCCGAACCCATCTTGCAAATTG
GGTACCATCACTATGTTCCAGCAGAAGGGCCGTCTGTTTCAAAGAGCATGGCTGGTGAGA
GCAACTTCATCCAAGGGTGGGTTCTTTGAAGTAGTGTTTGATCAAAAGAGAAGAAGAAGA
AGAAAAAAAACATAAGTATGACTTCTATATATATTTGTGTAATGTGTGTATTGTGTTGAC
ATACTGATCACCACATGAATTGCTTGTATACTTATATAGCTTCTCTTTCATGGGGACAAT
ATATATATCACCATTTCTAGCTAAA