Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0048g01100.t01
CDS Infomation

cds chromosome:12X:15:15225185:15231771:1 gene:VIT_15s0048g01100 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase [Source:UniProtKB/TrEMBL;Acc:F6I363]
Sequence

ATGGCTTCAGATCAAGAGTTGTCAGGAACTGTGCAGAACATACTGGACCAAGAGAGTCTG
AAGTGGGTCTTTGTTGGTGGTAAAGGCGGCGTTGGCAAGACTACGTGTAGTTCGATTCTG
TCGATCCTTCTCTCTAGGGTTAGATCCTCTGTTTTGATAATCTCCACTGACCCCGCTCAC
AATCTCAGCGATGCGTTTCAGCAGCGTTTCACCAAGGCACCCACTTTGGTTAATGGGTTC
TCCAATCTCTATGCAATGGAAGTGGATCCCAGTGTAGAGAACGAAGAATTACCTGGTGAT
GGAATGGATAATCTTTTCTCTGAGCTGGCAAATGCAATTCCCGGAATTGATGAGGCAATG
AGCTTTGCAGAAATGTTGAAGTTGGTTCAAACAATGGATTACTCTGTGATAGTATTTGAT
ACAGCTCCTACTGGTCATACACTTCGGTTATTGCAATTTCCATCAACATTAGAGAAGGGG
CTTGCTAAAATGATGTCCTTAAAAAATAAATTTGGTGGTTTATTGAATCAGATGACCCGT
CTCTTTGGTGTGGACGATGAATTTGGTGAGGATGCACTTCTGGGTAGGCTTGAGGGCATG
AAAGATGTGATTGAACAAGTGAATAAGCAATTCAAGGACCCAGACTTAACAACTTTTGTT
TGTGTTTGCATTCCGGAGTTCCTTTCTCTCTATGAAACAGAGAGACTGGTGCAGGAACTG
AATAAATTTGAGATAGATTCGCACAATGTTATCATTAACCAAGTGCTTTATGATGAAGAA
GTTGTTGAATCAAAGTTGCTTAAAGCAAGAATGCGGATGCAACAAAAGTACCTTGATCAG
TTCTACATGCTGTATGATGATTTTCACATTACCAAGCTTCCTTTGCTACCAGAAGAGGTT
TGTGGGGTTGAAGCTCTGAAAGCATTTTCACATAATTTCATAACACCCTATCAGCCTGTC
ATCGAGAAAGGCACAATGGAAGAGCTGGAGGCAAGAGTGTCAATGCTAAAGCAACAGTTG
ACAGATGCTGAGGCAGAGCTTGAGAGACTGAGAAAAGGAAAACAAAAGCAGGTTGGAAAG
TTCTGCTGTTACTTGTAG

Peptide Sequence

PEP ID

VIT_15s0048g01100.t01
PEP Infomation

pep chromosome:12X:15:15225185:15231771:1 gene:VIT_15s0048g01100 transcript:VIT_15s0048g01100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase [Source:UniProtKB/TrEMBL;Acc:F6I363]
Sequence

MASDQELSGTVQNILDQESLKWVFVGGKGGVGKTTCSSILSILLSRVRSSVLIISTDPAH
NLSDAFQQRFTKAPTLVNGFSNLYAMEVDPSVENEELPGDGMDNLFSELANAIPGIDEAM
SFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSTLEKGLAKMMSLKNKFGGLLNQMTR
LFGVDDEFGEDALLGRLEGMKDVIEQVNKQFKDPDLTTFVCVCIPEFLSLYETERLVQEL
NKFEIDSHNVIINQVLYDEEVVESKLLKARMRMQQKYLDQFYMLYDDFHITKLPLLPEEV
CGVEALKAFSHNFITPYQPVIEKGTMEELEARVSMLKQQLTDAEAELERLRKGKQKQVGK
FCCYL

Transcript Sequence

Transcript ID

VIT_15s0048g01100.t01
Transcript Infomation

cdna chromosome:12X:15:15225185:15231771:1 gene:VIT_15s0048g01100 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase [Source:UniProtKB/TrEMBL;Acc:F6I363]
Sequence

ATCCGGCTTTTAGTTTACAAATTGGGAGACGGAATTCATAGTTCTTTCAGATTCTTGTTT
TTTTTCTCTCTCTAGATTTGTGGGTTAGAGAGACAAGCTCCGTTTGTTAATGGCTTCAGA
TCAAGAGTTGTCAGGAACTGTGCAGAACATACTGGACCAAGAGAGTCTGAAGTGGGTCTT
TGTTGGTGGTAAAGGCGGCGTTGGCAAGACTACGTGTAGTTCGATTCTGTCGATCCTTCT
CTCTAGGGTTAGATCCTCTGTTTTGATAATCTCCACTGACCCCGCTCACAATCTCAGCGA
TGCGTTTCAGCAGCGTTTCACCAAGGCACCCACTTTGGTTAATGGGTTCTCCAATCTCTA
TGCAATGGAAGTGGATCCCAGTGTAGAGAACGAAGAATTACCTGGTGATGGAATGGATAA
TCTTTTCTCTGAGCTGGCAAATGCAATTCCCGGAATTGATGAGGCAATGAGCTTTGCAGA
AATGTTGAAGTTGGTTCAAACAATGGATTACTCTGTGATAGTATTTGATACAGCTCCTAC
TGGTCATACACTTCGGTTATTGCAATTTCCATCAACATTAGAGAAGGGGCTTGCTAAAAT
GATGTCCTTAAAAAATAAATTTGGTGGTTTATTGAATCAGATGACCCGTCTCTTTGGTGT
GGACGATGAATTTGGTGAGGATGCACTTCTGGGTAGGCTTGAGGGCATGAAAGATGTGAT
TGAACAAGTGAATAAGCAATTCAAGGACCCAGACTTAACAACTTTTGTTTGTGTTTGCAT
TCCGGAGTTCCTTTCTCTCTATGAAACAGAGAGACTGGTGCAGGAACTGAATAAATTTGA
GATAGATTCGCACAATGTTATCATTAACCAAGTGCTTTATGATGAAGAAGTTGTTGAATC
AAAGTTGCTTAAAGCAAGAATGCGGATGCAACAAAAGTACCTTGATCAGTTCTACATGCT
GTATGATGATTTTCACATTACCAAGCTTCCTTTGCTACCAGAAGAGGTTTGTGGGGTTGA
AGCTCTGAAAGCATTTTCACATAATTTCATAACACCCTATCAGCCTGTCATCGAGAAAGG
CACAATGGAAGAGCTGGAGGCAAGAGTGTCAATGCTAAAGCAACAGTTGACAGATGCTGA
GGCAGAGCTTGAGAGACTGAGAAAAGGAAAACAAAAGCAGGTTGGAAAGTTCTGCTGTTA
CTTGTAG