Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_15s0048g00940.t01
CDS Infomation	cds chromosome:12X:15:15075031:15084021:1 gene:VIT_15s0048g00940 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase 2 subunit KU80 [Source:UniProtKB/TrEMBL;Acc:D7U7S2]
Sequence	ATGTTTTTTCTTTACAGGAGGCATTGGTTTTATTGCTTGATGTCAGTCCACCAATGCACA ATTTTCTGCCAGAAGTTGAAAAACTCTGCTTCATGCTATTGCAGAAGAAGGCATCTGATC TACAACAAAAAAGATTTAGTTGGAATTGTTTTATTTGGAACTAAAGTTACTAAAAATGAG CTGACGAAGAAAGTGGGGGGATATAAGTATGTGCTGGTTTCACAGGATATCAAAGTTGTT GATGGTGATCTGGTTGAAGCTGTACGAGAACTTCCTCGAGGGACTTTTGCTGGTGATTTT CTCGATGCTATTGTTGTTGGGATGGATATGTTGATAAAGAAATTTCTATTGACAAAAAGG GGAAAGATAAAGAAACGTCTTTGCCTTATTACAAGTGCACTATGTCCTACCAAGGGTCCA TATAAAGGAGCAAAAGAAGATGAAATTGGCACCATTGCTGAACAAATGACTGCACATGGC ATCAGGCTGGAATGTATAGTTGCAAGGGGGAGGCTAAGTGGCAATATGAATATGAGAATA ATGGAGGAGAATGATCTTCTATTGAAACTATTTTCCAAGAAGACAATTGCAAAGACAGTG TATGTTGAGAGTCCTACTTCATTATTAGGTGCCCTTAGAACTCGGAACGTAGCACCTGTT ACAATATTCAGAGGTGATCTTGAATTAAGCCCCAAAATGGAGATCAAGGTATGGGTTTAC AAGAAATCAGCTGAAGAGCTCCCTGTACTGAAACTATATTCAGATGAAGCTCCTCCTACT GATAAATTTGCCACACATGAAGTCAGGGTAAATCTTCAGTATAAAAGTGTTGAAGATCCT ACCAAAGTTGTACCTCTGACGCAAAGGATTCAAGGTTATAGTTATGGACCTCAAGTTGTT CCAATTTCATCTGCTGAATGGGAAGCTGTCAAATTCGAACCAGAAAAGGGTGTGAAGCTT CTAGGATTCACTGATGCTTCAAACATAATGCGCCACTATTACAAGAAGGATGTCAACATC TTCATTGCTGAGCCAGGAAATACAAAGGCTATTCTTGCAGTTTCTGCCTTAGCAAGAGCA ATGAAGGAAATGAACAAGGTAGCAATTTTGCGCTGTGTTTGGAGACGAAAACAGAGAAAT GTTATCATAGGGATCTTGACACCCAATGTATCTGAAAAAGATAGTGTTCCTGATTCGTTT TACTTTAATGTACTTCCCTATGCTGAGGATGTTCAAGAATTTCAGTTTCCATCTTTCAGC AATCTTCCTTTGTCATGGCAGCCAAATGAAGAACAGCAAGAAGCAGCAGATGACTTGGTC CAGATGCTTTATCTTGCACCATTTGGCAGAGAGGAATCTCTCTTACCTGATGTTACACCC AATCCTGTTCTGGAGCGTTTTTATCGTTATCTTGAGTTGAAGTCGAAGAAGCCATATGCA GCTGTTCCTCCAGTTGACAAAACCCTCAAAACAATAACGGAGCCTGATCCAAAACTCCTT GCTCAAAACAAGTCCATAATTGATGAATTTAAAAGGCGGTTTGAACTCAAGCAGAATCCT AAGCTGAAGAAATCAACTAGAGACAGACAGTCTGGTGTGAAAGAGGAAGCAAATATTGGA GAGAGTAGTGATGCTGGAGCCATCAATTCTGTTGAAAATACATCTGTAATTACTATGGTT AAGAAGATTGGAGATTCAACTCCTATCCAAGATTTTGAAGCCATGATGTCACACAGAGAA AGCCCAGAGTGGGTTGGTAAAGCAATCAAGGAGATGAAGAACAAGATTTTTGACCTGGTG CAAAATTCAAATGAAAGGGATAACCATCTTAAAGCATTGGATTGTCTAGTTGCCTTTCGC AAGGGTTGCATCCTTGAGCAAAAACCGACAGAGTTCAACAATTTCCTCCTCCATATTTAC AAATTCTGCAAGTACCATAATCTCAACAGTTTCTGTGAATCCCTTGCATCAAATGAAATC ATGCTGATCCCCAAGACTGAAGTAACAGACAGTGAAGTTACAGAAGATGGGGCCAGAAAC TTTATGGTGAAAAAGGAGCCAATACTAGAGTAA

Peptide Sequence

PEP ID	VIT_15s0048g00940.t01
PEP Infomation	pep chromosome:12X:15:15075031:15084021:1 gene:VIT_15s0048g00940 transcript:VIT_15s0048g00940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase 2 subunit KU80 [Source:UniProtKB/TrEMBL;Acc:D7U7S2]
Sequence	MFFLYRRHWFYCLMSVHQCTIFCQKLKNSASCYCRRRHLIYNKKDLVGIVLFGTKVTKNE LTKKVGGYKYVLVSQDIKVVDGDLVEAVRELPRGTFAGDFLDAIVVGMDMLIKKFLLTKR GKIKKRLCLITSALCPTKGPYKGAKEDEIGTIAEQMTAHGIRLECIVARGRLSGNMNMRI MEENDLLLKLFSKKTIAKTVYVESPTSLLGALRTRNVAPVTIFRGDLELSPKMEIKVWVY KKSAEELPVLKLYSDEAPPTDKFATHEVRVNLQYKSVEDPTKVVPLTQRIQGYSYGPQVV PISSAEWEAVKFEPEKGVKLLGFTDASNIMRHYYKKDVNIFIAEPGNTKAILAVSALARA MKEMNKVAILRCVWRRKQRNVIIGILTPNVSEKDSVPDSFYFNVLPYAEDVQEFQFPSFS NLPLSWQPNEEQQEAADDLVQMLYLAPFGREESLLPDVTPNPVLERFYRYLELKSKKPYA AVPPVDKTLKTITEPDPKLLAQNKSIIDEFKRRFELKQNPKLKKSTRDRQSGVKEEANIG ESSDAGAINSVENTSVITMVKKIGDSTPIQDFEAMMSHRESPEWVGKAIKEMKNKIFDLV QNSNERDNHLKALDCLVAFRKGCILEQKPTEFNNFLLHIYKFCKYHNLNSFCESLASNEI MLIPKTEVTDSEVTEDGARNFMVKKEPILE

Transcript Sequence

Transcript ID	VIT_15s0048g00940.t01
Transcript Infomation	cdna chromosome:12X:15:15075031:15084021:1 gene:VIT_15s0048g00940 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase 2 subunit KU80 [Source:UniProtKB/TrEMBL;Acc:D7U7S2]
Sequence	ATGTTTTTTCTTTACAGGAGGCATTGGTTTTATTGCTTGATGTCAGTCCACCAATGCACA ATTTTCTGCCAGAAGTTGAAAAACTCTGCTTCATGCTATTGCAGAAGAAGGCATCTGATC TACAACAAAAAAGATTTAGTTGGAATTGTTTTATTTGGAACTAAAGTTACTAAAAATGAG CTGACGAAGAAAGTGGGGGGATATAAGTATGTGCTGGTTTCACAGGATATCAAAGTTGTT GATGGTGATCTGGTTGAAGCTGTACGAGAACTTCCTCGAGGGACTTTTGCTGGTGATTTT CTCGATGCTATTGTTGTTGGGATGGATATGTTGATAAAGAAATTTCTATTGACAAAAAGG GGAAAGATAAAGAAACGTCTTTGCCTTATTACAAGTGCACTATGTCCTACCAAGGGTCCA TATAAAGGAGCAAAAGAAGATGAAATTGGCACCATTGCTGAACAAATGACTGCACATGGC ATCAGGCTGGAATGTATAGTTGCAAGGGGGAGGCTAAGTGGCAATATGAATATGAGAATA ATGGAGGAGAATGATCTTCTATTGAAACTATTTTCCAAGAAGACAATTGCAAAGACAGTG TATGTTGAGAGTCCTACTTCATTATTAGGTGCCCTTAGAACTCGGAACGTAGCACCTGTT ACAATATTCAGAGGTGATCTTGAATTAAGCCCCAAAATGGAGATCAAGGTATGGGTTTAC AAGAAATCAGCTGAAGAGCTCCCTGTACTGAAACTATATTCAGATGAAGCTCCTCCTACT GATAAATTTGCCACACATGAAGTCAGGGTAAATCTTCAGTATAAAAGTGTTGAAGATCCT ACCAAAGTTGTACCTCTGACGCAAAGGATTCAAGGTTATAGTTATGGACCTCAAGTTGTT CCAATTTCATCTGCTGAATGGGAAGCTGTCAAATTCGAACCAGAAAAGGGTGTGAAGCTT CTAGGATTCACTGATGCTTCAAACATAATGCGCCACTATTACAAGAAGGATGTCAACATC TTCATTGCTGAGCCAGGAAATACAAAGGCTATTCTTGCAGTTTCTGCCTTAGCAAGAGCA ATGAAGGAAATGAACAAGGTAGCAATTTTGCGCTGTGTTTGGAGACGAAAACAGAGAAAT GTTATCATAGGGATCTTGACACCCAATGTATCTGAAAAAGATAGTGTTCCTGATTCGTTT TACTTTAATGTACTTCCCTATGCTGAGGATGTTCAAGAATTTCAGTTTCCATCTTTCAGC AATCTTCCTTTGTCATGGCAGCCAAATGAAGAACAGCAAGAAGCAGCAGATGACTTGGTC CAGATGCTTTATCTTGCACCATTTGGCAGAGAGGAATCTCTCTTACCTGATGTTACACCC AATCCTGTTCTGGAGCGTTTTTATCGTTATCTTGAGTTGAAGTCGAAGAAGCCATATGCA GCTGTTCCTCCAGTTGACAAAACCCTCAAAACAATAACGGAGCCTGATCCAAAACTCCTT GCTCAAAACAAGTCCATAATTGATGAATTTAAAAGGCGGTTTGAACTCAAGCAGAATCCT AAGCTGAAGAAATCAACTAGAGACAGACAGTCTGGTGTGAAAGAGGAAGCAAATATTGGA GAGAGTAGTGATGCTGGAGCCATCAATTCTGTTGAAAATACATCTGTAATTACTATGGTT AAGAAGATTGGAGATTCAACTCCTATCCAAGATTTTGAAGCCATGATGTCACACAGAGAA AGCCCAGAGTGGGTTGGTAAAGCAATCAAGGAGATGAAGAACAAGATTTTTGACCTGGTG CAAAATTCAAATGAAAGGGATAACCATCTTAAAGCATTGGATTGTCTAGTTGCCTTTCGC AAGGGTTGCATCCTTGAGCAAAAACCGACAGAGTTCAACAATTTCCTCCTCCATATTTAC AAATTCTGCAAGTACCATAATCTCAACAGTTTCTGTGAATCCCTTGCATCAAATGAAATC ATGCTGATCCCCAAGACTGAAGTAACAGACAGTGAAGTTACAGAAGATGGGGCCAGAAAC TTTATGGTGAAAAAGGAGCCAATACTAGAGTAAACAAAATGGAACCTCTTTATTATTTTT GGATTTCTCGTAGTAACCAGCTTTGTTTCTGACTCCATTTTGAACTGAAAGGCAGAAAAC AAAAGAACAGAAAAGAAAGAAAGAGAACTCTTCTTTCAATCTTGAATTTGGTATTTTGGA GGAATTGAAAATTCTGTTCCCTGGC