Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_15s0048g00930.t01
CDS Infomation	cds chromosome:12X:15:15062594:15072177:1 gene:VIT_15s0048g00930 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase 2 subunit KU80 [Source:UniProtKB/TrEMBL;Acc:D7U7S3]
Sequence	ATGCACACTTTTCTGCCAGAGGTTGAAAAGCTCTGCTCCATGCTATTACAGAAGAAGCTG ATTTACAGCAAAAATGATGAAGTGGGAATTGTTTTATTTGGAACTGAAGATACCAATAAT GAGCTGACAAAGGAAGTGGGAGGATATGAGCATGTGGTGGTCTTACGACATATCAAAGTT GTTGATGGTGATCTTGTTGAAGCTTTACAGCAGCTTCCACGAGGAACTGTTGCTGGTGAT TTTCTTGATGCCATTGTTGTTGGGATGGATATGTTGATAAAGAAATTTGGATCTACAAAC AAGGGAAAAAAACGTCTTTGTCTTATTACAAGCGCACTATGTCCTATCAAAGATCCTTAT GAAGGAACAAAAGAAGATCAAATTGGTACCATTGCTGAACAAATGTCTGCACATGGCATG AAACTAGAATGTATAGTTGCAAGGGGGAGGCTGAGTGGCAATGTGGATATGAGAATAATG GATGAGAATGATCTTCTGTTGAAACTATTTTCAACAAAAACAACTGCAAAGACACTGTAT GTTGAGACTCCAACTTCATTATTAGGTGCCCTTAGAACTCGAAGCATAGCACCTGTTACA ATATTCAGGGGTGATCTTGAACTAAGCCCCAAAATGAGGATCAAGGTATGGGTTTACAAG AAAACGGCTGAGGAGAGGTTCCCCACTCTGAAGCAATATTCTGATCAGGCTCCTCCAACT GATAAATTTGCCACGCATGAGGTGAAGGTAGATTTTGAGTACAAAAGCGTTGAAGAATCT AGCAAAGTTGTACCCCCAGAGCAAAGGATTAAAGGTTATCGTTATGGGCCTCAAGTTATT CCTATTTCATCCGCAGAATGGGAAGCTGTCAAGTTCAAACCAGAAAAGGGTGTGAAGCTT TTAGGATTTACTGATGCTTCAAATGTAATGCGCCACTATTATATGCACGATGTCAACATC TTCATTGCTGAGCCGAGCAATACAAAGGCCATGCTCGCAGTTTCTGCCTTAGCAAGAGCA ATGAAGGAAATGAATAAGGTAGCAATTTTGCGCTGTGTATGGAGACAAGGACAGGGAAGT GTTGTCATAGGGATCTTGACACCCAATGTGTCTGACAAAGATGATATCCCAGATTCATTT TACTTCAATGTACTTCCTTATGCTGAGGATGTTCGGGAATTTCAGTTTCCATCTTTCAGT AATCTCCCTGCATCGTGGCAGCCGAATGAAGAACAGCAAGAGGCAGCAGATAACTTGGTC AAGATGCTTGACCTTGCACCATCTGGCAGCAAGGAGACTCTACTGCCTGATTTGACACCA AATCCTGTTCTGGAGCGTTTTTATCGTCATCTTGAGTTGAAATCAAAGCACCCAGATGCA GCTGTTCCTCCTCTTGACGAAAGTCTCAAGAAGATAACTGAACCTGATCCAAAACTTCTT TCTCAAAACAAGCCCATAATTGATGCATTCAGAAGGCGCTTTGAACTCAAAGAGAATCCA AAGCTTAAGAAATCAACTAGACGATTATTGAGAGAAAGACCATCTGGACTGAATGAGGAA GCTAGTATGGGGGATGGTAGTGATGGCCAAGCCATCAAATCTATTGAAAATACATCTACT GTTGGGGTTGAGAAGATTGGAGATTCAACTCCTATTCAAGATTTTGAAGCCATGATGTCA TGCAGAGATAGCCCGGAATGGGTTGGGAAAGCAATTAACGAAATGAAAAATAAAATTTTT GACCTGGTGGAAGACTCCTATGAAGGGGATAATTATCTTAAAGCACTGGAATATCTAGTT GCCCTTCGCAAGGGTTGCGTCCTTGAGCAAGAACCAAAACAGTTCAATGATTTCCTTCAC CATCTTTACAAATATTGTGAGAAACATAACCTTAATAGTTTCTGCGAATCTCTTGCATCC AAGGAGATCATGCTGATCAACAAGACAGAAGCAGCAGACAGTGAAGTTACAGAAGATGAG GCTAGAAGCTTGATGGTGAAAAAGGAGCCAAAACTAGAGTAA

Peptide Sequence

PEP ID	VIT_15s0048g00930.t01
PEP Infomation	pep chromosome:12X:15:15062594:15072177:1 gene:VIT_15s0048g00930 transcript:VIT_15s0048g00930.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase 2 subunit KU80 [Source:UniProtKB/TrEMBL;Acc:D7U7S3]
Sequence	MHTFLPEVEKLCSMLLQKKLIYSKNDEVGIVLFGTEDTNNELTKEVGGYEHVVVLRHIKV VDGDLVEALQQLPRGTVAGDFLDAIVVGMDMLIKKFGSTNKGKKRLCLITSALCPIKDPY EGTKEDQIGTIAEQMSAHGMKLECIVARGRLSGNVDMRIMDENDLLLKLFSTKTTAKTLY VETPTSLLGALRTRSIAPVTIFRGDLELSPKMRIKVWVYKKTAEERFPTLKQYSDQAPPT DKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRYGPQVIPISSAEWEAVKFKPEKGVKL LGFTDASNVMRHYYMHDVNIFIAEPSNTKAMLAVSALARAMKEMNKVAILRCVWRQGQGS VVIGILTPNVSDKDDIPDSFYFNVLPYAEDVREFQFPSFSNLPASWQPNEEQQEAADNLV KMLDLAPSGSKETLLPDLTPNPVLERFYRHLELKSKHPDAAVPPLDESLKKITEPDPKLL SQNKPIIDAFRRRFELKENPKLKKSTRRLLRERPSGLNEEASMGDGSDGQAIKSIENTST VGVEKIGDSTPIQDFEAMMSCRDSPEWVGKAINEMKNKIFDLVEDSYEGDNYLKALEYLV ALRKGCVLEQEPKQFNDFLHHLYKYCEKHNLNSFCESLASKEIMLINKTEAADSEVTEDE ARSLMVKKEPKLE

Transcript Sequence

Transcript ID	VIT_15s0048g00930.t01
Transcript Infomation	cdna chromosome:12X:15:15062594:15072177:1 gene:VIT_15s0048g00930 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent DNA helicase 2 subunit KU80 [Source:UniProtKB/TrEMBL;Acc:D7U7S3]
Sequence	GAGGCATTGCTTTTATTGCTTGATGTCAGTCCATCAATGCACACTTTTCTGCCAGAGGTT GAAAAGCTCTGCTCCATGCTATTACAGAAGAAGCTGATTTACAGCAAAAATGATGAAGTG GGAATTGTTTTATTTGGAACTGAAGATACCAATAATGAGCTGACAAAGGAAGTGGGAGGA TATGAGCATGTGGTGGTCTTACGACATATCAAAGTTGTTGATGGTGATCTTGTTGAAGCT TTACAGCAGCTTCCACGAGGAACTGTTGCTGGTGATTTTCTTGATGCCATTGTTGTTGGG ATGGATATGTTGATAAAGAAATTTGGATCTACAAACAAGGGAAAAAAACGTCTTTGTCTT ATTACAAGCGCACTATGTCCTATCAAAGATCCTTATGAAGGAACAAAAGAAGATCAAATT GGTACCATTGCTGAACAAATGTCTGCACATGGCATGAAACTAGAATGTATAGTTGCAAGG GGGAGGCTGAGTGGCAATGTGGATATGAGAATAATGGATGAGAATGATCTTCTGTTGAAA CTATTTTCAACAAAAACAACTGCAAAGACACTGTATGTTGAGACTCCAACTTCATTATTA GGTGCCCTTAGAACTCGAAGCATAGCACCTGTTACAATATTCAGGGGTGATCTTGAACTA AGCCCCAAAATGAGGATCAAGGTATGGGTTTACAAGAAAACGGCTGAGGAGAGGTTCCCC ACTCTGAAGCAATATTCTGATCAGGCTCCTCCAACTGATAAATTTGCCACGCATGAGGTG AAGGTAGATTTTGAGTACAAAAGCGTTGAAGAATCTAGCAAAGTTGTACCCCCAGAGCAA AGGATTAAAGGTTATCGTTATGGGCCTCAAGTTATTCCTATTTCATCCGCAGAATGGGAA GCTGTCAAGTTCAAACCAGAAAAGGGTGTGAAGCTTTTAGGATTTACTGATGCTTCAAAT GTAATGCGCCACTATTATATGCACGATGTCAACATCTTCATTGCTGAGCCGAGCAATACA AAGGCCATGCTCGCAGTTTCTGCCTTAGCAAGAGCAATGAAGGAAATGAATAAGGTAGCA ATTTTGCGCTGTGTATGGAGACAAGGACAGGGAAGTGTTGTCATAGGGATCTTGACACCC AATGTGTCTGACAAAGATGATATCCCAGATTCATTTTACTTCAATGTACTTCCTTATGCT GAGGATGTTCGGGAATTTCAGTTTCCATCTTTCAGTAATCTCCCTGCATCGTGGCAGCCG AATGAAGAACAGCAAGAGGCAGCAGATAACTTGGTCAAGATGCTTGACCTTGCACCATCT GGCAGCAAGGAGACTCTACTGCCTGATTTGACACCAAATCCTGTTCTGGAGCGTTTTTAT CGTCATCTTGAGTTGAAATCAAAGCACCCAGATGCAGCTGTTCCTCCTCTTGACGAAAGT CTCAAGAAGATAACTGAACCTGATCCAAAACTTCTTTCTCAAAACAAGCCCATAATTGAT GCATTCAGAAGGCGCTTTGAACTCAAAGAGAATCCAAAGCTTAAGAAATCAACTAGACGA TTATTGAGAGAAAGACCATCTGGACTGAATGAGGAAGCTAGTATGGGGGATGGTAGTGAT GGCCAAGCCATCAAATCTATTGAAAATACATCTACTGTTGGGGTTGAGAAGATTGGAGAT TCAACTCCTATTCAAGATTTTGAAGCCATGATGTCATGCAGAGATAGCCCGGAATGGGTT GGGAAAGCAATTAACGAAATGAAAAATAAAATTTTTGACCTGGTGGAAGACTCCTATGAA GGGGATAATTATCTTAAAGCACTGGAATATCTAGTTGCCCTTCGCAAGGGTTGCGTCCTT GAGCAAGAACCAAAACAGTTCAATGATTTCCTTCACCATCTTTACAAATATTGTGAGAAA CATAACCTTAATAGTTTCTGCGAATCTCTTGCATCCAAGGAGATCATGCTGATCAACAAG ACAGAAGCAGCAGACAGTGAAGTTACAGAAGATGAGGCTAGAAGCTTGATGGTGAAAAAG GAGCCAAAACTAGAGTAAACAAATTGAGCAGCTCCATGTGAACTTTTGTTGCTTATTGCT AACCACACACTGAGGTCTGACTCCTTTCAGGTGTGTTTGGTATATGGAGCAAAATGGAAT TCATGATATGAAAGCCGTGTATTCAACCTA