Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0048g00900.t01
CDS Infomation

cds chromosome:12X:15:15054735:15058540:1 gene:VIT_15s0048g00900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7U7S6]
Sequence

ATGACGAAGCAGCAAGCTAACTGGTCTCCTTACGACAACAATGGAGGATCTTGTGTTGCA
ATTGCAGGTGCCGATTACTGCGTCATCGCAGCCGATACTCGGATGTCGACCGGCTACAAT
ATCCTCACTCGCGATTACTCTAAAATCTGCAAATTAGCAGACAAATGTGTAATGGCCTCA
TCTGGATTTCAAGCTGATGTAAGAGCTTTACAGAAGCACTTGGCAGCTAGGCACTTGATC
TATCAGCATCAGCACAACAAGCAGATGAGTTGCCCTGCAATGGCTCAACTGCTCTCCAAC
ACCCTCTACTATAAACGTTTCTTCCCTTATTATTCTTTTAACGTTTTAGGTGGCCTTGAT
AATGAAGGAAAGGGTTGTGTCTTCACATACGATGCTGTGGGATCCTATGAGAAGGTTGGA
TATAGCTCCCAAGGTTCAGGTTCAACACTCATCATGCCTTTCTTGGACAACCAACTGAAA
TCTCCCAGCCCTCTTTTATTGCCTGCTCTGGATGCTGTTACTCCTCTCTCTGAGCCAGAA
GCAGTTGATTTAGTGAAAACTGTCTTTGCATCTGCAACTGAGAGGGATATATACACTGGA
GACAAGCTGGAAATTGTCATCTTAAATGCTAGTGGAATTCGTCGTGAGTACATGGATCTT
AGGAAAGATTGA

Peptide Sequence

PEP ID

VIT_15s0048g00900.t01
PEP Infomation

pep chromosome:12X:15:15054735:15058540:1 gene:VIT_15s0048g00900 transcript:VIT_15s0048g00900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7U7S6]
Sequence

MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICKLADKCVMAS
SGFQADVRALQKHLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLD
NEGKGCVFTYDAVGSYEKVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPALDAVTPLSEPE
AVDLVKTVFASATERDIYTGDKLEIVILNASGIRREYMDLRKD

Transcript Sequence

Transcript ID

VIT_15s0048g00900.t01
Transcript Infomation

cdna chromosome:12X:15:15054735:15058540:1 gene:VIT_15s0048g00900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7U7S6]
Sequence

TTTGGTTCTCCCCTCAGCTCAGTGCCCTAATCTCTCTCGCTGTCTCTTTTCATTTCACAA
TGACGAAGCAGCAAGCTAACTGGTCTCCTTACGACAACAATGGAGGATCTTGTGTTGCAA
TTGCAGGTGCCGATTACTGCGTCATCGCAGCCGATACTCGGATGTCGACCGGCTACAATA
TCCTCACTCGCGATTACTCTAAAATCTGCAAATTAGCAGACAAATGTGTAATGGCCTCAT
CTGGATTTCAAGCTGATGTAAGAGCTTTACAGAAGCACTTGGCAGCTAGGCACTTGATCT
ATCAGCATCAGCACAACAAGCAGATGAGTTGCCCTGCAATGGCTCAACTGCTCTCCAACA
CCCTCTACTATAAACGTTTCTTCCCTTATTATTCTTTTAACGTTTTAGGTGGCCTTGATA
ATGAAGGAAAGGGTTGTGTCTTCACATACGATGCTGTGGGATCCTATGAGAAGGTTGGAT
ATAGCTCCCAAGGTTCAGGTTCAACACTCATCATGCCTTTCTTGGACAACCAACTGAAAT
CTCCCAGCCCTCTTTTATTGCCTGCTCTGGATGCTGTTACTCCTCTCTCTGAGCCAGAAG
CAGTTGATTTAGTGAAAACTGTCTTTGCATCTGCAACTGAGAGGGATATATACACTGGAG
ACAAGCTGGAAATTGTCATCTTAAATGCTAGTGGAATTCGTCGTGAGTACATGGATCTTA
GGAAAGATTGATGGTTCAAGTGGGATTGGAATACGGAATGTTCTCAGATGATAGCTGTTG
GGACGAGTCTCTTGATATCTGCATGACTAATGAATTATCAGTCCTTTAGCTGCTTGCATT
CCAATTTGAACACAAGTTTTCCTACTTAATAGAAATGTTGCAACTGTGACACCTCTGTTG
GAATTTCAGTGCTTAGCATGATATTTTTTGTCTGCAGTTTGCTCTATATACATTTTATCT
AAGTTTGGGATTATCGAAAATTATATGGGAAATGTTTCCATTAAA