Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_15s0048g00360.t01
CDS Infomation	cds chromosome:12X:15:14483444:14493269:-1 gene:VIT_15s0048g00360 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-phosphoshikimate 1-carboxyvinyltransferase [Source:UniProtKB/TrEMBL;Acc:F6I398]
Sequence	ATGGCTCAAGTTACCAGAATTATCAGTGGTGGTGTCCAGAACGGCCCTCTCTTGCCCAAT CTCTCCAAGCCTCACAAACCCACTCCTCCATTCACTACTCCCTTCTTGAGATCAGGGCCT AATGTTTCTTCTTTTTCTTTGAAGCATGAGAGGGCAGTTAGCAATTCGGTTGTTTCTGTT AGGGCCCCGTTTAGGGTTTCGGCCTCTGTTGCCACTAAGGAGAAGCTGTCGACGGTGCCG GAGATTGTCCTACAACCCATTAAAGAGATCTCCGGCACCATCACGTTGCCGGGTTCCAAG TCCCTTTCCAATCGGATTCTGCTTCTTGCTGCTCTCTCTGAGGGAACTACTGTTGTGGAC AATTTGTTGAATAGTGAAGATGTTCATTACATGCTCGGAGCACTGAGAACCCTTGGGCTA CAAGTGGAAGAGCAAAGTGAAAATAAAAGAGTTATTGTGCAAGGTTGTGGGGGCCAATTT CCAGTGGGTAATGGATCAGTAGACCAAGTCCAACTTTTCCTAGGAAATTGTGCAACAGCA ACGCGTGCATTGACAGCTGCAGTTACAGCTGCTGGTGGAAATGCAAGCTATGTACTTGAT GGGGTGCTGCGCATGAGAGAAAGACCAATTGGGGATCTAGTCACAGGTCTTAAGCAGCTC GGTGCAGACGTTAACTGCTTTCTTGGAACAAATTGCCCTCCTGTTTATGTTAATGGGAAT GGAGGCCTTCCAGGAGGAAAGGTGAAGCTCTCTGGATCAATTAGTAGTCAATACTTGACT GCTTTGCTTATGGCAGCTCCCTTGGCTCTAGGAGATGTGGAGATTGAGATTATTGATAGA CTTATTTCCATTCCTTATGTTGAAATGACCTTGAAAGTGATGGAACGTTTTGGGGTTAGT GTAGAGCACGGTAATACATGGGACCGCCGATTCTTGATCCGAGGAGGTAAAAAATACAAT GCTAGTTACTTCCTAGCCGGTGCTGCTGTAACTGGTGGGACTGTCACAGTTGAAGGCTGT GGGACAAGCAGCCTACAGGGGGATGTAAAATTTGCTGAGGTTCTTGAGCAAACGGGTGCA AAAGTTTCCTGGACGGAGAACAGTGTCACAGTCACAGGCCCACCCCGAGATTCTTCTGGA AGGAAACACTTACGTGCCATTGACGTCAACATGAACGAAATGCCAGATGTTGCCATCACT CTTGCTGTAGTTGCCCTTTATGCCGATGGGCCGACTGCCATAAGAGATGTGGCTAGTTGG AGGGTGAAGGAGACCGAAAGGATGATTGCCATTTGCACAGAACTCAGGAAGCTGGGAGCA ACAGTTGTAGAAGGGCCTGATTACTGTGTGATCACTCCACCAGAAAAACTAAACGTGACA TCAATAGACACATACGACGATCACAGGATGGCCATGGCATTTTCTCTTGCTGCCTGTGCA GATGTTCCAGTAACCATCAAGGATCCTGGTTGCACCAAGGAAAAGCTTCCCTGA

Peptide Sequence

PEP ID	VIT_15s0048g00360.t01
PEP Infomation	pep chromosome:12X:15:14483444:14493269:-1 gene:VIT_15s0048g00360 transcript:VIT_15s0048g00360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-phosphoshikimate 1-carboxyvinyltransferase [Source:UniProtKB/TrEMBL;Acc:F6I398]
Sequence	MAQVTRIISGGVQNGPLLPNLSKPHKPTPPFTTPFLRSGPNVSSFSLKHERAVSNSVVSV RAPFRVSASVATKEKLSTVPEIVLQPIKEISGTITLPGSKSLSNRILLLAALSEGTTVVD NLLNSEDVHYMLGALRTLGLQVEEQSENKRVIVQGCGGQFPVGNGSVDQVQLFLGNCATA TRALTAAVTAAGGNASYVLDGVLRMRERPIGDLVTGLKQLGADVNCFLGTNCPPVYVNGN GGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDRLISIPYVEMTLKVMERFGVS VEHGNTWDRRFLIRGGKKYNASYFLAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEQTGA KVSWTENSVTVTGPPRDSSGRKHLRAIDVNMNEMPDVAITLAVVALYADGPTAIRDVASW RVKETERMIAICTELRKLGATVVEGPDYCVITPPEKLNVTSIDTYDDHRMAMAFSLAACA DVPVTIKDPGCTKEKLP

Transcript Sequence

Transcript ID	VIT_15s0048g00360.t01
Transcript Infomation	cdna chromosome:12X:15:14483444:14493269:-1 gene:VIT_15s0048g00360 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-phosphoshikimate 1-carboxyvinyltransferase [Source:UniProtKB/TrEMBL;Acc:F6I398]
Sequence	TTTAGAGAGAGAAAAATGGCTCAAGTTACCAGAATTATCAGTGGTGGTGTCCAGAACGGC CCTCTCTTGCCCAATCTCTCCAAGCCTCACAAACCCACTCCTCCATTCACTACTCCCTTC TTGAGATCAGGGCCTAATGTTTCTTCTTTTTCTTTGAAGCATGAGAGGGCAGTTAGCAAT TCGGTTGTTTCTGTTAGGGCCCCGTTTAGGGTTTCGGCCTCTGTTGCCACTAAGGAGAAG CTGTCGACGGTGCCGGAGATTGTCCTACAACCCATTAAAGAGATCTCCGGCACCATCACG TTGCCGGGTTCCAAGTCCCTTTCCAATCGGATTCTGCTTCTTGCTGCTCTCTCTGAGGGA ACTACTGTTGTGGACAATTTGTTGAATAGTGAAGATGTTCATTACATGCTCGGAGCACTG AGAACCCTTGGGCTACAAGTGGAAGAGCAAAGTGAAAATAAAAGAGTTATTGTGCAAGGT TGTGGGGGCCAATTTCCAGTGGGTAATGGATCAGTAGACCAAGTCCAACTTTTCCTAGGA AATTGTGCAACAGCAACGCGTGCATTGACAGCTGCAGTTACAGCTGCTGGTGGAAATGCA AGCTATGTACTTGATGGGGTGCTGCGCATGAGAGAAAGACCAATTGGGGATCTAGTCACA GGTCTTAAGCAGCTCGGTGCAGACGTTAACTGCTTTCTTGGAACAAATTGCCCTCCTGTT TATGTTAATGGGAATGGAGGCCTTCCAGGAGGAAAGGTGAAGCTCTCTGGATCAATTAGT AGTCAATACTTGACTGCTTTGCTTATGGCAGCTCCCTTGGCTCTAGGAGATGTGGAGATT GAGATTATTGATAGACTTATTTCCATTCCTTATGTTGAAATGACCTTGAAAGTGATGGAA CGTTTTGGGGTTAGTGTAGAGCACGGTAATACATGGGACCGCCGATTCTTGATCCGAGGA GGTAAAAAATACAATGCTAGTTACTTCCTAGCCGGTGCTGCTGTAACTGGTGGGACTGTC ACAGTTGAAGGCTGTGGGACAAGCAGCCTACAGGGGGATGTAAAATTTGCTGAGGTTCTT GAGCAAACGGGTGCAAAAGTTTCCTGGACGGAGAACAGTGTCACAGTCACAGGCCCACCC CGAGATTCTTCTGGAAGGAAACACTTACGTGCCATTGACGTCAACATGAACGAAATGCCA GATGTTGCCATCACTCTTGCTGTAGTTGCCCTTTATGCCGATGGGCCGACTGCCATAAGA GATGTGGCTAGTTGGAGGGTGAAGGAGACCGAAAGGATGATTGCCATTTGCACAGAACTC AGGAAGCTGGGAGCAACAGTTGTAGAAGGGCCTGATTACTGTGTGATCACTCCACCAGAA AAACTAAACGTGACATCAATAGACACATACGACGATCACAGGATGGCCATGGCATTTTCT CTTGCTGCCTGTGCAGATGTTCCAGTAACCATCAAGGATCCTGGTTGCACCAAGGAAAAG CTTCCCTGACTACTTCGAAGTCCTCCACCGTTTTACCAAACATTGAAGTACCATCAACCT TGAGAAAA