Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0046g03520.t01
CDS Infomation

cds chromosome:12X:15:20074367:20079287:-1 gene:VIT_15s0046g03520 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphomannomutase [Source:UniProtKB/TrEMBL;Acc:D7UC38]
Sequence

ATGGCGGCAAGGAAGGCTGGCTTAATTGCATTGTTCGATGTTGATGGGACTCTCACAGCG
CCGAGAAAGGTGGCTACTCCACAGATGTTAGAGTTCATGCGGAAACTACGGAAGGTTATT
ACAGTTGGGGTTGTTGGAGGATCTGACCTTGTTAAGATATCAGAGCAGCTTGGAAGTTCA
GTTATTGATGACTATGATTATGTATTTTCCGAAAATGGTCTAGTGGCTCATAAAGATGGG
AAGCTCATTGGCACCCAGAGCTTGAAGACATTTCTTGGAGAAGAAAAGCTGAAGGAAATT
ATTAATTTCACACTTCATTATATTGCTGACTTGGATATCCCAATAAAAAGGGGAACCTTT
ATAGAGTTCCGAAGTGGGATGCTCAATGTATCACCAATTGGGCGAAACTGCAGCCAGGAA
GAGCGTGATGAGTTTGAAAAGTATGACAAGATTCACAACATACGTCCGAAGATGGTTTCT
GTGCTTCGTGAGAAGTTTGCTCACCTAAACCTGACATTTTCTATTGGAGGACAAATAAGC
TTTGATGTTTTCCCCCAAGGCTGGGACAAGACATACTGCTTGAGATACCTTGATGATTTT
CCTGAAATCCACTTCTTTGGCGATAAAACATACGAGGCAGGAAATGACCATGAGATTTAT
GAATCAGAACGGACTGTGGGTCACACAGTCACCAGCCCTGATGATACTGTAGAGCAGTGT
ACGGCTCTCTTCCTTGCCAAATCAAGTTGA

Peptide Sequence

PEP ID

VIT_15s0046g03520.t01
PEP Infomation

pep chromosome:12X:15:20074367:20079287:-1 gene:VIT_15s0046g03520 transcript:VIT_15s0046g03520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphomannomutase [Source:UniProtKB/TrEMBL;Acc:D7UC38]
Sequence

MAARKAGLIALFDVDGTLTAPRKVATPQMLEFMRKLRKVITVGVVGGSDLVKISEQLGSS
VIDDYDYVFSENGLVAHKDGKLIGTQSLKTFLGEEKLKEIINFTLHYIADLDIPIKRGTF
IEFRSGMLNVSPIGRNCSQEERDEFEKYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQIS
FDVFPQGWDKTYCLRYLDDFPEIHFFGDKTYEAGNDHEIYESERTVGHTVTSPDDTVEQC
TALFLAKSS

Transcript Sequence

Transcript ID

VIT_15s0046g03520.t01
Transcript Infomation

cdna chromosome:12X:15:20074367:20079287:-1 gene:VIT_15s0046g03520 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphomannomutase [Source:UniProtKB/TrEMBL;Acc:D7UC38]
Sequence

TTTTGTTAAGGTCTGGTGGAAGTTCACTACAATGGCGGCAAGGAAGGCTGGCTTAATTGC
ATTGTTCGATGTTGATGGGACTCTCACAGCGCCGAGAAAGGTGGCTACTCCACAGATGTT
AGAGTTCATGCGGAAACTACGGAAGGTTATTACAGTTGGGGTTGTTGGAGGATCTGACCT
TGTTAAGATATCAGAGCAGCTTGGAAGTTCAGTTATTGATGACTATGATTATGTATTTTC
CGAAAATGGTCTAGTGGCTCATAAAGATGGGAAGCTCATTGGCACCCAGAGCTTGAAGAC
ATTTCTTGGAGAAGAAAAGCTGAAGGAAATTATTAATTTCACACTTCATTATATTGCTGA
CTTGGATATCCCAATAAAAAGGGGAACCTTTATAGAGTTCCGAAGTGGGATGCTCAATGT
ATCACCAATTGGGCGAAACTGCAGCCAGGAAGAGCGTGATGAGTTTGAAAAGTATGACAA
GATTCACAACATACGTCCGAAGATGGTTTCTGTGCTTCGTGAGAAGTTTGCTCACCTAAA
CCTGACATTTTCTATTGGAGGACAAATAAGCTTTGATGTTTTCCCCCAAGGCTGGGACAA
GACATACTGCTTGAGATACCTTGATGATTTTCCTGAAATCCACTTCTTTGGCGATAAAAC
ATACGAGGCAGGAAATGACCATGAGATTTATGAATCAGAACGGACTGTGGGTCACACAGT
CACCAGCCCTGATGATACTGTAGAGCAGTGTACGGCTCTCTTCCTTGCCAAATCAAGTTG
AATTCCCCTAGCATCTGTCAACCGCTTTTCATCCTTTTAATCTTTATTATATGCCATTTG
TAATCTAGAAATGACAATAAATGTGTATCCAAACTACCAAGTTATGTGAGTTATGTCTGT
TGTCCTTTCATTTGAGACTAGGCAATTTATGGTGCTCTTGTTTATTAAAACACTGGCACT
GCCATGATTACTTATCTGTATTCAACATCTATGTACTCAACATGTAAGCGCTCAAACATT
TGAGAACTTGGAAATGGCCCAAGTGATGAGTCCATTTTGATATCCAAATTCAGAACTGTT
GTGGAATGATATAAGGAGTTCAGGTA