Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0046g02900.t01
CDS Infomation

cds chromosome:12X:15:19605169:19611792:-1 gene:VIT_15s0046g02900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGTGTCAGTGCTCAAAACTCGCACCATGTTGCTGGGATTCACAATTCAAGGGGTCG
GTTCTTGAGGCTCCTGATGTTGATAATGGGGAGAAGAGCGAGGTTGATTACTTGCCTGTA
TTCTGTGAATACACATTCGAGCAGCTTAAGAATGCCACATCTGGTTTTGCCGTAGAGAAC
ATCGTGTCTGAGCATGGAGAAAAGGCTCCGAACGTTGTGTATAAAGGGAAGCTAGAGAAC
CAGAGGAGAATTGCTGTCAAGCGCTTTAACAGAGTGGCTTGGCCTGATGCCCGACAATTC
TCGGAAGAAGCAAGAGCAGTTGGTCAGCTCCGCAACCATAGATTGGCAAATTTGCTTGGT
TGTTGTTGTGAGGATAATGAAAGGTTGCTGGTGGCGGAATATATGCCCAATGAAACACTT
GCAAAACACCTTTTCCATTGGGAAACTCAACCTATGAAATGGGCAATGCGGTTAAGGGTG
GTTCTACATCTTGCCCAAGCTTTAGAATATTGTACAGGCAGAGGGCGTGCCCTTTACCAT
GACCTTAATGCTTATAGAATTTTGTTCGATGAGGATGGTAATCCTAGACTCTCTTGCTTT
GGCCTGATGAAAAATAGTAGGGATGGAAAAAGTTATAGTACGAATCTGGCGTTTACTCCT
CCTGAGTATTTGAGAACTGGAAGAGTAACACCAGAAAGTGTAATATATAGCTTCGGCACT
CTTTTGCTTGACCTGCTCAGTGGAAAGCATATCCCTCCCAGCCATGCCCTTGATCTGATA
CGAGACAGGAATCTGCAGATGCTGACAGATTCCTGCTTGGAAGGACAGTTTACTAATGAT
GATGGAACTGAGTTAGTACGGTTAGCTTCCCGATGTTTACAATATGAACCTCGAGAACGG
CCAAATCCGAAGTCATTGGTGGCTGCTTTGACTCCTCTTCAGAAGGAAACCGAGGTTCCT
TCCCATGTATTAATGGGGATTCCGCACAGTGCTTCATTCTCTCCCCTATCCCCACTTGGT
GAAGCTTGCTCAAGAATGGACTTGACTGCCATACATGAGATCCTAGAGAGTGTTGGGTAC
AAAGATGACGAAGGAATGACAAATGAGCTTTCGTTCCAAATGTGGACTGATCAAATGCAG
GAGACATTAAATTCTAAGAAAAAAGGTGATGCTGCTTTCCGGCAAAAGGATTTCAGAGCT
GCCATTGACTGTTATACACAGTTCATTGATGTTGGAACCATGGTTTCTCCAACGGTTTGT
GCACGCCGTAGCTTGTGTTATCTCATGAGTGACATGCCTCAAGAAGCTCTCAACGATGCA
ATGCAAGCCCAAGTCATTTCCCCAGTATGGCACATCGCGTCATATCTGCAAGCTGCTGCC
CTTACGGGACTTGGAATGGAAAATGAAGCACAAGCTGCCCTCAAGGACGGTACCACTCTT
GAAGCCCAGAGGAACACCCCTTCTGGACAAAAGTGA

Peptide Sequence

PEP ID

VIT_15s0046g02900.t01
PEP Infomation

pep chromosome:12X:15:19605169:19611792:-1 gene:VIT_15s0046g02900 transcript:VIT_15s0046g02900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGCQCSKLAPCCWDSQFKGSVLEAPDVDNGEKSEVDYLPVFCEYTFEQLKNATSGFAVEN
IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRVAWPDARQFSEEARAVGQLRNHRLANLLG
CCCEDNERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTGRGRALYH
DLNAYRILFDEDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT
LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTNDDGTELVRLASRCLQYEPRER
PNPKSLVAALTPLQKETEVPSHVLMGIPHSASFSPLSPLGEACSRMDLTAIHEILESVGY
KDDEGMTNELSFQMWTDQMQETLNSKKKGDAAFRQKDFRAAIDCYTQFIDVGTMVSPTVC
ARRSLCYLMSDMPQEALNDAMQAQVISPVWHIASYLQAAALTGLGMENEAQAALKDGTTL
EAQRNTPSGQK

Transcript Sequence

Transcript ID

VIT_15s0046g02900.t01
Transcript Infomation

cdna chromosome:12X:15:19605169:19611792:-1 gene:VIT_15s0046g02900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAATTTCTGGGTAGTTGTTTTTGGAATCTGGTTTGGTCCGGTTTTTGTAGTTTCAGCAT
CACTCAGTTGGCCCAGGAGTGGAGAATCGTTCCAAAAGCCTTGAGGAGATTTTTTCATTT
AGGTTCTGATCTCCGATTTGACATGGGGTGTCAGTGCTCAAAACTCGCACCATGTTGCTG
GGATTCACAATTCAAGGGGTCGGTTCTTGAGGCTCCTGATGTTGATAATGGGGAGAAGAG
CGAGGTTGATTACTTGCCTGTATTCTGTGAATACACATTCGAGCAGCTTAAGAATGCCAC
ATCTGGTTTTGCCGTAGAGAACATCGTGTCTGAGCATGGAGAAAAGGCTCCGAACGTTGT
GTATAAAGGGAAGCTAGAGAACCAGAGGAGAATTGCTGTCAAGCGCTTTAACAGAGTGGC
TTGGCCTGATGCCCGACAATTCTCGGAAGAAGCAAGAGCAGTTGGTCAGCTCCGCAACCA
TAGATTGGCAAATTTGCTTGGTTGTTGTTGTGAGGATAATGAAAGGTTGCTGGTGGCGGA
ATATATGCCCAATGAAACACTTGCAAAACACCTTTTCCATTGGGAAACTCAACCTATGAA
ATGGGCAATGCGGTTAAGGGTGGTTCTACATCTTGCCCAAGCTTTAGAATATTGTACAGG
CAGAGGGCGTGCCCTTTACCATGACCTTAATGCTTATAGAATTTTGTTCGATGAGGATGG
TAATCCTAGACTCTCTTGCTTTGGCCTGATGAAAAATAGTAGGGATGGAAAAAGTTATAG
TACGAATCTGGCGTTTACTCCTCCTGAGTATTTGAGAACTGGAAGAGTAACACCAGAAAG
TGTAATATATAGCTTCGGCACTCTTTTGCTTGACCTGCTCAGTGGAAAGCATATCCCTCC
CAGCCATGCCCTTGATCTGATACGAGACAGGAATCTGCAGATGCTGACAGATTCCTGCTT
GGAAGGACAGTTTACTAATGATGATGGAACTGAGTTAGTACGGTTAGCTTCCCGATGTTT
ACAATATGAACCTCGAGAACGGCCAAATCCGAAGTCATTGGTGGCTGCTTTGACTCCTCT
TCAGAAGGAAACCGAGGTTCCTTCCCATGTATTAATGGGGATTCCGCACAGTGCTTCATT
CTCTCCCCTATCCCCACTTGGTGAAGCTTGCTCAAGAATGGACTTGACTGCCATACATGA
GATCCTAGAGAGTGTTGGGTACAAAGATGACGAAGGAATGACAAATGAGCTTTCGTTCCA
AATGTGGACTGATCAAATGCAGGAGACATTAAATTCTAAGAAAAAAGGTGATGCTGCTTT
CCGGCAAAAGGATTTCAGAGCTGCCATTGACTGTTATACACAGTTCATTGATGTTGGAAC
CATGGTTTCTCCAACGGTTTGTGCACGCCGTAGCTTGTGTTATCTCATGAGTGACATGCC
TCAAGAAGCTCTCAACGATGCAATGCAAGCCCAAGTCATTTCCCCAGTATGGCACATCGC
GTCATATCTGCAAGCTGCTGCCCTTACGGGACTTGGAATGGAAAATGAAGCACAAGCTGC
CCTCAAGGACGGTACCACTCTTGAAGCCCAGAGGAACACCCCTTCTGGACAAAAGTGAAA
AGCTTGTGCACGTCTGTAAATTTCCCTCATTTTTCTCATTTGTATCGCTCCTGGGGAGAC
AACTGCATGGCATGGATTCAAGGTTTCAACTTCTGGGCAGATCGACCAAAGCTTCATTCA
TTTCCATAACAGTCAAAAACGACACTCCAAATTCTTATTCAACCATGAGGTCAAGGGTGT
CACAGGTATGAAGAATTCTTAGGAAAACAAGATTTGGATGGTTGCAGGTTTCGGCCATTT
TTTCTCTGGGCATATAGGGTGTCTTTCTGAAAATTTGTTTTTCCATTTTCTTGGGTTTGA
TCAACTGTGCATGAAAACGATACGAAGGATTTTTCAGCCACCTCAATTGAAGAATAGTGA
GACAACAGATGGAACGGGGGAGGCAAGAATTTGTTCACAAGCTTGTAATTTGTGTACAGA
AACTATTGCCTGGTTTGTTTTTTGGTGATGTGAAATTGAGTGTTGCAGACATCAAATACT
GATTCATCCTCTTCTTCTCTCCTACTCTGCTATAATAGCTTGCTGTTATAATA