Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0046g02650.t01
CDS Infomation

cds chromosome:12X:15:19400686:19405392:-1 gene:VIT_15s0046g02650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAATTGTATGCGGTGTTCCCCTTCTTGAATGTGTGTACTGTCTGGCATGTGCTCGT
TGGGTGTGGAAGAAGTGCCTGTACACTGCAGGCCATGAAAGTGAGAACTGGGGTCTTGCA
ACTGCTGAAGAATTTCAACCCATCCCCCACCTATGTCGATTAATCCTAGCTGTCTATGAG
GAAGACCTTCGAAACCCACTTTGGGCTCCCCCTGGAGGGTATGGTATTAATCCTGATTGG
GTTATCTTACGCAAGAACTATGAAGAAACCCAAGGGAGGGTTCCTCCTTACATGATCTAC
CTTGATCATGATAATGCTGATATAGTCCTAGCAGTCAGGGGACTTAATTTGGCAAAGGAA
AGTGATTATGCAGTCTTGCTCGATAACAAACTTGGGCAGACAAAATTTGATGGTGGTTAT
GTTCACAATGGTTTGTTGAAGGCAGCTGAATTGCTTTTGGATGCAGAGTGTGAGGTTCTG
AGGGAACTGATTGAGAGGAATCCCAATTATACCTTAACCTTTGCGGGGCATTCCCTAGGG
GCAGGGGTAGTAACATTGTTGGCTATGGTGGCAGTTCAGAACAAAGATAAGTTGCACAAC
ATTGAGAGGAAGAGGATCAGATGCTATGCAACTGCTCCTGCTAGGTGTATATCCCTGAAT
TTGGCTGTGAGATATGCAGATATCATCAATTCTGTTGTCCTTCAGGACGATTTCTTACCT
CGGACAACCACTGCTCTGGAAGATGTTTTCAAGTCACTTTTCTGTTTGCCATGTTTACTA
TGCCTAATGTGCTTGAAGGATACATGTACATTGGAGGAGAAGATGCTTAAAGATCCTAGG
CGACTATATGCGCCCGGTCGTCTCTATCACATTGTTGAGCGGAAGCCATTCAGGTTTGGA
AGATTTCCCCCAGTTGTGAGGACAGCAGTACCTGTGGATGGGAGGTTTGAGCACATAGTA
CTTTCTTGCAATGTGACTTCGGACCATGCCATCATTTGGATAGAGAAAGAATCCCAAAAG
GCTTTTGATTTAATGCTGGAGAAAGATCAGATCATGGAGATCCCAGCAAAGCAGAGGATG
GAGCGGCTGGAGTCTGTGGCCAGAGAACACACGGAGGAGTACAAGGCGGCACTCAAGAGG
GCTGCCGCCCTCGACGTTCCTCAAGCTTACTCACCTTCTGCTTATGGAACATTCAGTGAA
ATGGGTGAAGGGGAGGGCGGAGGGGAGAATTCCGGCAGATTGAGTGAAGAACAAGTTCCC
ATTCTTTCCTCAAGGAGGAGGAGGGAAAGCTGGAATGAACTGGTTGGGAGGCTCTTCCAC
AGAGATGATTCTGGCCAAATGGTGCTCAGGCCCTAG

Peptide Sequence

PEP ID

VIT_15s0046g02650.t01
PEP Infomation

pep chromosome:12X:15:19400686:19405392:-1 gene:VIT_15s0046g02650 transcript:VIT_15s0046g02650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSIVCGVPLLECVYCLACARWVWKKCLYTAGHESENWGLATAEEFQPIPHLCRLILAVYE
EDLRNPLWAPPGGYGINPDWVILRKNYEETQGRVPPYMIYLDHDNADIVLAVRGLNLAKE
SDYAVLLDNKLGQTKFDGGYVHNGLLKAAELLLDAECEVLRELIERNPNYTLTFAGHSLG
AGVVTLLAMVAVQNKDKLHNIERKRIRCYATAPARCISLNLAVRYADIINSVVLQDDFLP
RTTTALEDVFKSLFCLPCLLCLMCLKDTCTLEEKMLKDPRRLYAPGRLYHIVERKPFRFG
RFPPVVRTAVPVDGRFEHIVLSCNVTSDHAIIWIEKESQKAFDLMLEKDQIMEIPAKQRM
ERLESVAREHTEEYKAALKRAAALDVPQAYSPSAYGTFSEMGEGEGGGENSGRLSEEQVP
ILSSRRRRESWNELVGRLFHRDDSGQMVLRP

Transcript Sequence

Transcript ID

VIT_15s0046g02650.t01
Transcript Infomation

cdna chromosome:12X:15:19400686:19405392:-1 gene:VIT_15s0046g02650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCTATTCAGCATTCAGCTTTTGTTCAAATGTCGGATTGATAATTCCTTATTCAATCTT
TGTTCTTGCGTGTGTCATGTTTCTCAATATCTGTTAGCATGCTTATTTGATAGGAGTCAA
TGTCAATTGTATGCGGTGTTCCCCTTCTTGAATGTGTGTACTGTCTGGCATGTGCTCGTT
GGGTGTGGAAGAAGTGCCTGTACACTGCAGGCCATGAAAGTGAGAACTGGGGTCTTGCAA
CTGCTGAAGAATTTCAACCCATCCCCCACCTATGTCGATTAATCCTAGCTGTCTATGAGG
AAGACCTTCGAAACCCACTTTGGGCTCCCCCTGGAGGGTATGGTATTAATCCTGATTGGG
TTATCTTACGCAAGAACTATGAAGAAACCCAAGGGAGGGTTCCTCCTTACATGATCTACC
TTGATCATGATAATGCTGATATAGTCCTAGCAGTCAGGGGACTTAATTTGGCAAAGGAAA
GTGATTATGCAGTCTTGCTCGATAACAAACTTGGGCAGACAAAATTTGATGGTGGTTATG
TTCACAATGGTTTGTTGAAGGCAGCTGAATTGCTTTTGGATGCAGAGTGTGAGGTTCTGA
GGGAACTGATTGAGAGGAATCCCAATTATACCTTAACCTTTGCGGGGCATTCCCTAGGGG
CAGGGGTAGTAACATTGTTGGCTATGGTGGCAGTTCAGAACAAAGATAAGTTGCACAACA
TTGAGAGGAAGAGGATCAGATGCTATGCAACTGCTCCTGCTAGGTGTATATCCCTGAATT
TGGCTGTGAGATATGCAGATATCATCAATTCTGTTGTCCTTCAGGACGATTTCTTACCTC
GGACAACCACTGCTCTGGAAGATGTTTTCAAGTCACTTTTCTGTTTGCCATGTTTACTAT
GCCTAATGTGCTTGAAGGATACATGTACATTGGAGGAGAAGATGCTTAAAGATCCTAGGC
GACTATATGCGCCCGGTCGTCTCTATCACATTGTTGAGCGGAAGCCATTCAGGTTTGGAA
GATTTCCCCCAGTTGTGAGGACAGCAGTACCTGTGGATGGGAGGTTTGAGCACATAGTAC
TTTCTTGCAATGTGACTTCGGACCATGCCATCATTTGGATAGAGAAAGAATCCCAAAAGG
CTTTTGATTTAATGCTGGAGAAAGATCAGATCATGGAGATCCCAGCAAAGCAGAGGATGG
AGCGGCTGGAGTCTGTGGCCAGAGAACACACGGAGGAGTACAAGGCGGCACTCAAGAGGG
CTGCCGCCCTCGACGTTCCTCAAGCTTACTCACCTTCTGCTTATGGAACATTCAGTGAAA
TGGGTGAAGGGGAGGGCGGAGGGGAGAATTCCGGCAGATTGAGTGAAGAACAAGTTCCCA
TTCTTTCCTCAAGGAGGAGGAGGGAAAGCTGGAATGAACTGGTTGGGAGGCTCTTCCACA
GAGATGATTCTGGCCAAATGGTGCTCAGGCCCTAGAGGATGGAGAAATTGGTGGTAGTGT
AGCTTTAGCCAAAGAAGAAAGAAGAATTCATTCATTTATTCATTCATACCATTCCCAATT
TACAATGGGGGAAGATTATGATTGCATTAGGATTGATAACCAAA