Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0046g02460.t01
CDS Infomation

cds chromosome:12X:15:19232996:19241683:-1 gene:VIT_15s0046g02460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCTCCCAGAAATTTGCTCCTTCTGTTTGTTCTTCTTGTCTGCACTCTTACTGTG
GCCTTCGCCGGAGACATAGTTCACCAGGATGACATCGCTCCGAAGAAGCCTGGCTGCGAG
AACAACTTCGTTCTGGTAAAAGTACCAACTTGGGTTGATCATGAAGAAGGGAATGAATAT
GTTGGTGTTGGTGCTCGATTCGGTCCTACCTTGGAATCAAAAGAGAAACATGCTAACCAA
ACAACACTCACTCTTGCAGATCCTCCTGATTGTTGCAGTACACCCAAAAACAAGCTAACA
GGTGAAGTCATCTTGGTATACCGAGGTAACTGCAGTTTCACAAACAAGGCAAAGGTTGCA
GAAAATGCTGGTGCTTCTGCAGTTCTCATTGTAAACAACCAGACAGAACTTTTCAAAATG
GTTTGTGAAGCTAATGAAACTGCTATAAATATAAGCATTCCGGTTGTCATGCTTCCACAA
GATGCTGGTGCCAGCTTGGAAAAAAGTTTAAAGAACAACTCTTCAGTTGCTGTTCAGCTA
TACTCTCCAAAGCGTCCACTTGTTGACATAGCTGAGGTGTTTTTGTGGCTCATGGCCGTT
GGTACCATTTTATCTGCATCTTACTGGTCTGCATGGAGTGCCAGAGAAGCAGCTAATGAG
CAGGACAAGCTATTAAAGGATGCTTCAGATGAGTTTCTAAGTACAGAGGGCACTGGTTCT
AGTGGTATGGTGGATATCAACACGACATCAGCAGTTCTTTTTGTTGTGATCGCTTCATGT
TTCTTGGTTATGCTTTATAAACTTATGTCGTTCTGGTTTGTTGAGGTTCTGGTGGTTCTG
TTTTGCATTGGTGGGGTAGAGGGCCTTCAGACTTGCTTGGTGGCTTTGTTATCTTGTTTC
AGATGGTTTGAACAAGCTGCAGAATCATTTGTTAAGGTGCCATTCTTTGGAGCCGTCTCA
TATCTGACTTTGGCTGTGTCTCCATTCTGCATAGCATTTGCTGTTGTTTGGGCAGTTTTT
CGCCGCATCAACTTTGCTTGGATTGGACAAGATATCCTTGGTATTGCACTCATCATCACA
GTTCTTCAGATCGTTCGTGTTCCTAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCG
TTCTTGTACGACATCTTTTGGGTTTTTGTTTCTAAATGGTGGTTCAATGAGAGTGTGATG
ATTGTGGTAGCTCGTGGTGATAGGAGTGGGGAGGATGGTATTCCGATGCTACTGAAGATC
CCGCGAATGTTTGATCCTTGGGGTGGCTACAGCATCATTGGATTTGGTGATATTATCTTA
CCGGGACTGCTTGTGGCATTCTCACTAAGGTATGATTGGTTGGCAAAGAAGAGTCTCCGA
GCAGGATACTTTGTGTGGGCCATGACTGCTTATGGTCTAGGACTCCTCATCACATATGTG
GCCTTGAACTTGATGGATGGGCATGGCCAACCAGCTCTACTCTACATTGTTCCATTCACA
CTCGGCACCTTTCTGGCATTGGGAAAGAAGAGAGGCGATCTCAAGACTCTATGGACAAAA
GGAGAACCCGAAAGGCCATGCCCGCACATCCAACCTTCTCAATAG

Peptide Sequence

PEP ID

VIT_15s0046g02460.t01
PEP Infomation

pep chromosome:12X:15:19232996:19241683:-1 gene:VIT_15s0046g02460 transcript:VIT_15s0046g02460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSPRNLLLLFVLLVCTLTVAFAGDIVHQDDIAPKKPGCENNFVLVKVPTWVDHEEGNEY
VGVGARFGPTLESKEKHANQTTLTLADPPDCCSTPKNKLTGEVILVYRGNCSFTNKAKVA
ENAGASAVLIVNNQTELFKMVCEANETAINISIPVVMLPQDAGASLEKSLKNNSSVAVQL
YSPKRPLVDIAEVFLWLMAVGTILSASYWSAWSAREAANEQDKLLKDASDEFLSTEGTGS
SGMVDINTTSAVLFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCF
RWFEQAAESFVKVPFFGAVSYLTLAVSPFCIAFAVVWAVFRRINFAWIGQDILGIALIIT
VLQIVRVPNLKVGTVLLSCAFLYDIFWVFVSKWWFNESVMIVVARGDRSGEDGIPMLLKI
PRMFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKSLRAGYFVWAMTAYGLGLLITYV
ALNLMDGHGQPALLYIVPFTLGTFLALGKKRGDLKTLWTKGEPERPCPHIQPSQ

Transcript Sequence

Transcript ID

VIT_15s0046g02460.t01
Transcript Infomation

cdna chromosome:12X:15:19232996:19241683:-1 gene:VIT_15s0046g02460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGTGTAGATGATATTTTTTTCGTCGATTTCCCAGTCTTCTCTTCTGCTTTTTCTCTTT
CACCCTCTGTTGGAACCAAACAAAACCAAACCCTAACCTTCTCCGCTTGTTTCCCCAGAA
AATCGCTTCGTTTCTATGGATTCTCCCAGAAATTTGCTCCTTCTGTTTGTTCTTCTTGTC
TGCACTCTTACTGTGGCCTTCGCCGGAGACATAGTTCACCAGGATGACATCGCTCCGAAG
AAGCCTGGCTGCGAGAACAACTTCGTTCTGGTAAAAGTACCAACTTGGGTTGATCATGAA
GAAGGGAATGAATATGTTGGTGTTGGTGCTCGATTCGGTCCTACCTTGGAATCAAAAGAG
AAACATGCTAACCAAACAACACTCACTCTTGCAGATCCTCCTGATTGTTGCAGTACACCC
AAAAACAAGCTAACAGGTGAAGTCATCTTGGTATACCGAGGTAACTGCAGTTTCACAAAC
AAGGCAAAGGTTGCAGAAAATGCTGGTGCTTCTGCAGTTCTCATTGTAAACAACCAGACA
GAACTTTTCAAAATGGTTTGTGAAGCTAATGAAACTGCTATAAATATAAGCATTCCGGTT
GTCATGCTTCCACAAGATGCTGGTGCCAGCTTGGAAAAAAGTTTAAAGAACAACTCTTCA
GTTGCTGTTCAGCTATACTCTCCAAAGCGTCCACTTGTTGACATAGCTGAGGTGTTTTTG
TGGCTCATGGCCGTTGGTACCATTTTATCTGCATCTTACTGGTCTGCATGGAGTGCCAGA
GAAGCAGCTAATGAGCAGGACAAGCTATTAAAGGATGCTTCAGATGAGTTTCTAAGTACA
GAGGGCACTGGTTCTAGTGGTATGGTGGATATCAACACGACATCAGCAGTTCTTTTTGTT
GTGATCGCTTCATGTTTCTTGGTTATGCTTTATAAACTTATGTCGTTCTGGTTTGTTGAG
GTTCTGGTGGTTCTGTTTTGCATTGGTGGGGTAGAGGGCCTTCAGACTTGCTTGGTGGCT
TTGTTATCTTGTTTCAGATGGTTTGAACAAGCTGCAGAATCATTTGTTAAGGTGCCATTC
TTTGGAGCCGTCTCATATCTGACTTTGGCTGTGTCTCCATTCTGCATAGCATTTGCTGTT
GTTTGGGCAGTTTTTCGCCGCATCAACTTTGCTTGGATTGGACAAGATATCCTTGGTATT
GCACTCATCATCACAGTTCTTCAGATCGTTCGTGTTCCTAATCTCAAGGTTGGAACTGTT
CTTCTCAGTTGTGCGTTCTTGTACGACATCTTTTGGGTTTTTGTTTCTAAATGGTGGTTC
AATGAGAGTGTGATGATTGTGGTAGCTCGTGGTGATAGGAGTGGGGAGGATGGTATTCCG
ATGCTACTGAAGATCCCGCGAATGTTTGATCCTTGGGGTGGCTACAGCATCATTGGATTT
GGTGATATTATCTTACCGGGACTGCTTGTGGCATTCTCACTAAGGTATGATTGGTTGGCA
AAGAAGAGTCTCCGAGCAGGATACTTTGTGTGGGCCATGACTGCTTATGGTCTAGGACTC
CTCATCACATATGTGGCCTTGAACTTGATGGATGGGCATGGCCAACCAGCTCTACTCTAC
ATTGTTCCATTCACACTCGGCACCTTTCTGGCATTGGGAAAGAAGAGAGGCGATCTCAAG
ACTCTATGGACAAAAGGAGAACCCGAAAGGCCATGCCCGCACATCCAACCTTCTCAATAG
AGTACCTACCTCACCCACTCTCTACTGTAACAGTAGCTAAATTAGTTGTTAGTAAAAAAC
CCCGTTGTAGGAAAA