Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0046g01000.t01
CDS Infomation

cds chromosome:12X:15:18071376:18073084:1 gene:VIT_15s0046g01000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:D7UCP1]
Sequence

ATGGAGCACCCTTCTGCATTGGATGAATTTGAGCAGATAATGAGTGCAATACAGCATAAG
AAAATTGTTGTGTTTCTTGATTATGATGGGACTCTCTCAGACATTGTAGACGATCCCGAC
AAGGCTTTCATGACTGAAACGATGCGATCAGCGGTTCGTGAAGTGGCTGAATGTTACCCT
ACCGCCATCATCAGTGGAAGGCGTCGGGAGAAGGTTCAGGACTTTGTCAAATTGGACGAT
ATTTACTATGCAGGAAGCCATGGAATGGACATCATCTCTCCGGTATGCTCGAATAGGTTT
GGAGGTCAAGAACACCATCGCAGGGTTGTCGATGAAAAGGGTAATGAGATTGTCCTCTTC
CAACCTGCTGCAGACTTCTTACCTAAAGTTGAAGGGATTTTCAGGCTGCTGACTACACGA
ACCAAGAACATAAAAGGCTCGAGGGTTGAGGACAACAAGTTCTGCGTGTCGGTTCATTTC
CGATGCGTCCATGAAAAGGACACCAACGCCCTTAAAGAAGTGGTAGAATCTGTGCTGGAA
GATTATCCAGATTTTCGGGTTACTAGGGGGAAAAAGGTCCTTGAGGTTCGCCCTCTTATA
GAATGGGACAAGGGTCATGCCCTTGAGTATCTTCTCGATACGCTTGGTTTTGATAGCTCA
GATGTTGTCCCTATATACTTAGGCGATGACCGTACTGATGAAGATGCATTTAAGATGATA
ACAACTCGAGGAGAGGGGTACCCGATAATTGTTTCGTCCATCCCCAAAGAGACAAAGGCT
TCCTACTCTCTGCGCGACACCAAGGAGGTGATGCAGTTCCTTCAAAATCTTGCAAGGTGG
AGCACCAACTCTTCGCTGGGAAATTCATGA

Peptide Sequence

PEP ID

VIT_15s0046g01000.t01
PEP Infomation

pep chromosome:12X:15:18071376:18073084:1 gene:VIT_15s0046g01000 transcript:VIT_15s0046g01000.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:D7UCP1]
Sequence

MEHPSALDEFEQIMSAIQHKKIVVFLDYDGTLSDIVDDPDKAFMTETMRSAVREVAECYP
TAIISGRRREKVQDFVKLDDIYYAGSHGMDIISPVCSNRFGGQEHHRRVVDEKGNEIVLF
QPAADFLPKVEGIFRLLTTRTKNIKGSRVEDNKFCVSVHFRCVHEKDTNALKEVVESVLE
DYPDFRVTRGKKVLEVRPLIEWDKGHALEYLLDTLGFDSSDVVPIYLGDDRTDEDAFKMI
TTRGEGYPIIVSSIPKETKASYSLRDTKEVMQFLQNLARWSTNSSLGNS

Transcript Sequence

Transcript ID

VIT_15s0046g01000.t01
Transcript Infomation

cdna chromosome:12X:15:18071376:18073084:1 gene:VIT_15s0046g01000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:D7UCP1]
Sequence

ATGGAGCACCCTTCTGCATTGGATGAATTTGAGCAGATAATGAGTGCAATACAGCATAAG
AAAATTGTTGTGTTTCTTGATTATGATGGGACTCTCTCAGACATTGTAGACGATCCCGAC
AAGGCTTTCATGACTGAAACGATGCGATCAGCGGTTCGTGAAGTGGCTGAATGTTACCCT
ACCGCCATCATCAGTGGAAGGCGTCGGGAGAAGGTTCAGGACTTTGTCAAATTGGACGAT
ATTTACTATGCAGGAAGCCATGGAATGGACATCATCTCTCCGGTATGCTCGAATAGGTTT
GGAGGTCAAGAACACCATCGCAGGGTTGTCGATGAAAAGGGTAATGAGATTGTCCTCTTC
CAACCTGCTGCAGACTTCTTACCTAAAGTTGAAGGGATTTTCAGGCTGCTGACTACACGA
ACCAAGAACATAAAAGGCTCGAGGGTTGAGGACAACAAGTTCTGCGTGTCGGTTCATTTC
CGATGCGTCCATGAAAAGGACACCAACGCCCTTAAAGAAGTGGTAGAATCTGTGCTGGAA
GATTATCCAGATTTTCGGGTTACTAGGGGGAAAAAGGTCCTTGAGGTTCGCCCTCTTATA
GAATGGGACAAGGGTCATGCCCTTGAGTATCTTCTCGATACGCTTGGTTTTGATAGCTCA
GATGTTGTCCCTATATACTTAGGCGATGACCGTACTGATGAAGATGCATTTAAGATGATA
ACAACTCGAGGAGAGGGGTACCCGATAATTGTTTCGTCCATCCCCAAAGAGACAAAGGCT
TCCTACTCTCTGCGCGACACCAAGGAGGTGATGCAGTTCCTTCAAAATCTTGCAAGGTGG
AGCACCAACTCTTCGCTGGGAAATTCATGA