Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0046g00490.t01
CDS Infomation

cds chromosome:12X:15:17444781:17448228:1 gene:VIT_15s0046g00490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCCTGTAGGTGATCTGGATTCAAGACAGCAGGCTCTCAAGCCTATTCAAACAAAG
AGATCAGCAGGAAGAGAAGTAGAAGGAGATGGCGAAAAACCCGAGGATATCGAAGAAGAA
GAAGAACCTCTGAGTCCAGCTGCTCGAATATTTCATGAACCTTGCTTCAATGTCTATGTC
ATAGCAATTGTTGGGTGCAAAACCAGAATCAATGTTGATGTTATTAAAGCCAATTTGGGG
CACACTTTCCTTAAGCACCCTCGTTTCTCTAGCTTGCAGGTGAAGGATATGAAAAAAGAT
GGGGCGATGAAATGGGTTCGAACAAAGGTGGACTTGGACAAGCACGTTATAGTACCAAGA
ATCCACAACACCATTGATTCACCGGACAAGACGGTGGAAGACTATATTTCAAATCTCAGC
AAAACCTCCATAGACTTCTCTAAGCCTCTCTGGGAGCTCCATATTCTCAACCTCAAGACC
TCGGATGCCGAGTCCATCGCCGTTTTTCGAAGCCACCACTCCCTCGGCGACGGCATGTCC
CTCATGTCTCTTGTCCTCGCTTGTACTCGTCAAATCTCCAACCCGGAGGCTCTCCCAACT
TTGCCGGTGAAGAAGAGTTCGAATCCTGATCCGGTAAACTCCGGTGGGATTTGGTGGACA
ATTCAGTTGTTTTGGAATACCATTGTGGATGTTTTGATGTTTGTGGCCACCGCGCTCTTC
TTGAAGGACACAGTGACGCCGCTCAGCGGTGTCCAGAAAAAAGGAGATGGGCTTGGGTCG
AGAAGGTTTGTTTATCGGACCGTTAGTCTTGATGATATTAAACTGATCAAGAATGGGATG
AAAACAACTATTAACGATGTTGTAATGGGAGTGTCACTGGCTGGTCTTTCTCGATATCTC
AATAGAAGATATGGTGAGGCCAAGGAAGACAAAGGAGCCACCGAAGAGAAAAATAATCTT
CCTAAGAATATTCGCCTTAGGGCAACTCTTCTCATGAATATAAGACCATCACCAGGGATT
CATGCTTTAGCTGACATGATGGAGAAGGGGTCGAAAGCAAAGTGGGGAAATTGGATTGGA
TCTGTGCTTCTCCCTTTTGTTATTGTCTTACGCGATGATCCTTTAGACTATGTTCGTCAA
GCTAAAGCCATAATCGATCGAAAGAAGCATTCTCGTGAAGCTATATTCACTTTTTTCATT
ATTAAGATGGTTCTCAAATTATTTGGCATTAAGGCTGCAGCATTTTTATACCATAGAGTT
CCGAATCACACAACAATGTGCTTCTCAAATATAGTTGGACCTGTTGAAGAAGTTGGGTTT
TCTGGTCATCCATTGGTTTTCCTTGCTCCTAGTGTTTATGGCCAACCCCATGGATTGATG
ATTCATTTCCAAAGTTACATCAATAAAATGACACTTGTTCTTTCGGTTAAAGAAGAAATT
GTTCCCGATCCTCACCAGCTATGCAATGATCTTGAAGAGTCACTCAAACTCATCAAGGAT
GCTGTCATAGCAAAAGGGCTTGCCAAAGAAAATTCCACAAAATGA

Peptide Sequence

PEP ID

VIT_15s0046g00490.t01
PEP Infomation

pep chromosome:12X:15:17444781:17448228:1 gene:VIT_15s0046g00490 transcript:VIT_15s0046g00490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEPVGDLDSRQQALKPIQTKRSAGREVEGDGEKPEDIEEEEEPLSPAARIFHEPCFNVYV
IAIVGCKTRINVDVIKANLGHTFLKHPRFSSLQVKDMKKDGAMKWVRTKVDLDKHVIVPR
IHNTIDSPDKTVEDYISNLSKTSIDFSKPLWELHILNLKTSDAESIAVFRSHHSLGDGMS
LMSLVLACTRQISNPEALPTLPVKKSSNPDPVNSGGIWWTIQLFWNTIVDVLMFVATALF
LKDTVTPLSGVQKKGDGLGSRRFVYRTVSLDDIKLIKNGMKTTINDVVMGVSLAGLSRYL
NRRYGEAKEDKGATEEKNNLPKNIRLRATLLMNIRPSPGIHALADMMEKGSKAKWGNWIG
SVLLPFVIVLRDDPLDYVRQAKAIIDRKKHSREAIFTFFIIKMVLKLFGIKAAAFLYHRV
PNHTTMCFSNIVGPVEEVGFSGHPLVFLAPSVYGQPHGLMIHFQSYINKMTLVLSVKEEI
VPDPHQLCNDLEESLKLIKDAVIAKGLAKENSTK

Transcript Sequence

Transcript ID

VIT_15s0046g00490.t01
Transcript Infomation

cdna chromosome:12X:15:17444781:17448228:1 gene:VIT_15s0046g00490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTGAGCTGAGTATCATGGAGCCTGTAGGTGATCTGGATTCAAGACAGCAGGCTCTCAAGC
CTATTCAAACAAAGAGATCAGCAGGAAGAGAAGTAGAAGGAGATGGCGAAAAACCCGAGG
ATATCGAAGAAGAAGAAGAACCTCTGAGTCCAGCTGCTCGAATATTTCATGAACCTTGCT
TCAATGTCTATGTCATAGCAATTGTTGGGTGCAAAACCAGAATCAATGTTGATGTTATTA
AAGCCAATTTGGGGCACACTTTCCTTAAGCACCCTCGTTTCTCTAGCTTGCAGGTGAAGG
ATATGAAAAAAGATGGGGCGATGAAATGGGTTCGAACAAAGGTGGACTTGGACAAGCACG
TTATAGTACCAAGAATCCACAACACCATTGATTCACCGGACAAGACGGTGGAAGACTATA
TTTCAAATCTCAGCAAAACCTCCATAGACTTCTCTAAGCCTCTCTGGGAGCTCCATATTC
TCAACCTCAAGACCTCGGATGCCGAGTCCATCGCCGTTTTTCGAAGCCACCACTCCCTCG
GCGACGGCATGTCCCTCATGTCTCTTGTCCTCGCTTGTACTCGTCAAATCTCCAACCCGG
AGGCTCTCCCAACTTTGCCGGTGAAGAAGAGTTCGAATCCTGATCCGGTAAACTCCGGTG
GGATTTGGTGGACAATTCAGTTGTTTTGGAATACCATTGTGGATGTTTTGATGTTTGTGG
CCACCGCGCTCTTCTTGAAGGACACAGTGACGCCGCTCAGCGGTGTCCAGAAAAAAGGAG
ATGGGCTTGGGTCGAGAAGGTTTGTTTATCGGACCGTTAGTCTTGATGATATTAAACTGA
TCAAGAATGGGATGAAAACAACTATTAACGATGTTGTAATGGGAGTGTCACTGGCTGGTC
TTTCTCGATATCTCAATAGAAGATATGGTGAGGCCAAGGAAGACAAAGGAGCCACCGAAG
AGAAAAATAATCTTCCTAAGAATATTCGCCTTAGGGCAACTCTTCTCATGAATATAAGAC
CATCACCAGGGATTCATGCTTTAGCTGACATGATGGAGAAGGGGTCGAAAGCAAAGTGGG
GAAATTGGATTGGATCTGTGCTTCTCCCTTTTGTTATTGTCTTACGCGATGATCCTTTAG
ACTATGTTCGTCAAGCTAAAGCCATAATCGATCGAAAGAAGCATTCTCGTGAAGCTATAT
TCACTTTTTTCATTATTAAGATGGTTCTCAAATTATTTGGCATTAAGGCTGCAGCATTTT
TATACCATAGAGTTCCGAATCACACAACAATGTGCTTCTCAAATATAGTTGGACCTGTTG
AAGAAGTTGGGTTTTCTGGTCATCCATTGGTTTTCCTTGCTCCTAGTGTTTATGGCCAAC
CCCATGGATTGATGATTCATTTCCAAAGTTACATCAATAAAATGACACTTGTTCTTTCGG
TTAAAGAAGAAATTGTTCCCGATCCTCACCAGCTATGCAATGATCTTGAAGAGTCACTCA
AACTCATCAAGGATGCTGTCATAGCAAAAGGGCTTGCCAAAGAAAATTCCACAAAATGAG
CATGATTATATATGAATATATACAAATAAACACACAACACAATTAAAGTTGTGTTACATA
TTTATGAACTATGAAGATTTGTACTTATATGGTATTGTAGTTTTGTGATTGTATGTGTTC
TATAGATCTAAAGGAGATCAATTTGAAATAAAGGGTAAATGTGAGTTGTAGTG