Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0046g00390.t01
CDS Infomation

cds chromosome:12X:15:17384848:17387511:1 gene:VIT_15s0046g00390 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:D7UCU1]
Sequence

ATGGGAAACCGCGTCGCAGATCTTCACTCCCTAACCAAGTTCCAGGAGATTCTCAAGTGC
TCCGTTTGCTTCGACTTTATGCAGTCTCCAATTTATCAGTGCCACAATGGACACACACTC
TGTTCAAGCTGTAAAGCAAGGGTACTCAACAAATGTCCCGGTTGTAGGCAGCAGCTCGGT
AATATAAGGTGTCTAGCTCTGGAGAAGATGGCCAAATCACTTGAACTGCATTGCAAGTAT
GAGGAGTTTGGATGCCCTGAGATCATCCCTTACCACACCAAGCTCATGCATGAAGACTCG
TGTAACTTCCGGCCATACAGCTGCCCATGGTATGGATGTCCGTGCTCTGCTGTTGGGGAT
ATTCCACTCCTTGTTTCTCACCTGACAGATTATCACAAGGCAGTCATGTTCAATAGCTGC
AACTTTAAGCATGGATTTTTAATTGGAGATCTCTATAAAAACCCAGGCCGCAGATGGATA
GTAATTATCATCAATTGTTTTGACAAACACTTCTGTCTCCATGCTGAAGCCTTCCTTATA
GGGTCGACTCCCGTTTACATGGCATTCCTCAGCCTGATAGGCAACCATGCAGAGGCCGGC
AACTACAGCTACAGCCTGCAGATAGGGGGAAATGGGCGGAAGCTTACTTTTGAGGGCGTC
CCACAAAGCATTAGAGAGAGTGAGAGGAGGAGTTTGGAGAGTGCGGACAGCCTCATTGTG
CCGGGAGGCATGGTGCATTCCTTGGGAGGGGAGACGAGAGAGCCAAAACTTGAAATTACA
AGTCGGATATGGAAAACCCAGTGTGGATAA

Peptide Sequence

PEP ID

VIT_15s0046g00390.t01
PEP Infomation

pep chromosome:12X:15:17384848:17387511:1 gene:VIT_15s0046g00390 transcript:VIT_15s0046g00390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:D7UCU1]
Sequence

MGNRVADLHSLTKFQEILKCSVCFDFMQSPIYQCHNGHTLCSSCKARVLNKCPGCRQQLG
NIRCLALEKMAKSLELHCKYEEFGCPEIIPYHTKLMHEDSCNFRPYSCPWYGCPCSAVGD
IPLLVSHLTDYHKAVMFNSCNFKHGFLIGDLYKNPGRRWIVIIINCFDKHFCLHAEAFLI
GSTPVYMAFLSLIGNHAEAGNYSYSLQIGGNGRKLTFEGVPQSIRESERRSLESADSLIV
PGGMVHSLGGETREPKLEITSRIWKTQCG

Transcript Sequence

Transcript ID

VIT_15s0046g00390.t01
Transcript Infomation

cdna chromosome:12X:15:17384848:17387511:1 gene:VIT_15s0046g00390 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:D7UCU1]
Sequence

GTCTCTGTAGAATTGGGGCGTTGGGGGAATGGGAAACCGCGTCGCAGATCTTCACTCCCT
AACCAAGTTCCAGGAGATTCTCAAGTGCTCCGTTTGCTTCGACTTTATGCAGTCTCCAAT
TTATCAGTGCCACAATGGACACACACTCTGTTCAAGCTGTAAAGCAAGGGTACTCAACAA
ATGTCCCGGTTGTAGGCAGCAGCTCGGTAATATAAGGTGTCTAGCTCTGGAGAAGATGGC
CAAATCACTTGAACTGCATTGCAAGTATGAGGAGTTTGGATGCCCTGAGATCATCCCTTA
CCACACCAAGCTCATGCATGAAGACTCGTGTAACTTCCGGCCATACAGCTGCCCATGGTA
TGGATGTCCGTGCTCTGCTGTTGGGGATATTCCACTCCTTGTTTCTCACCTGACAGATTA
TCACAAGGCAGTCATGTTCAATAGCTGCAACTTTAAGCATGGATTTTTAATTGGAGATCT
CTATAAAAACCCAGGCCGCAGATGGATAGTAATTATCATCAATTGTTTTGACAAACACTT
CTGTCTCCATGCTGAAGCCTTCCTTATAGGGTCGACTCCCGTTTACATGGCATTCCTCAG
CCTGATAGGCAACCATGCAGAGGCCGGCAACTACAGCTACAGCCTGCAGATAGGGGGAAA
TGGGCGGAAGCTTACTTTTGAGGGCGTCCCACAAAGCATTAGAGAGAGTGAGAGGAGGAG
TTTGGAGAGTGCGGACAGCCTCATTGTGCCGGGAGGCATGGTGCATTCCTTGGGAGGGGA
GACGAGAGAGCCAAAACTTGAAATTACAAGTCGGATATGGAAAACCCAGTGTGGATAA