Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0046g00100.t01
CDS Infomation

cds chromosome:12X:15:17151522:17154829:-1 gene:VIT_15s0046g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATTTTAGGCATGGTTTGGTAATGCAAGGGGCTGAGGACGAGGACGAGGCCGCCTAT
GTCGAGAAAGATCCCACTGGTCGATATGTTCGGTTCAAAGAAATATTGGGCAAGGGCGCA
TTCAAGACTGTCTATAAGGCATTTGACGAAGTTGATGGAATAGAAATCGCTTGGAACCAA
GTGAAGATTGACGATGTCTTGCGGTCACCAGAAGATTTGGAAAAACTATATTCTGAAGTT
CATCTCCTGAAATCATTAAAACATGAAAATATTATCAAATTCTATAATTCCTGGGTGGAT
GATAAGAAGAAGACTGTTAACATGATTACTGAGCTCTTCACGTCTGGGAGTCTAAGGCAA
TATCGAAAGAAGCACAAAAATGTTGATATGAAGGCTATAAAGAATTGGGCAAGGCAGGTT
CTTCGAGGTTTGGTGTATCTTCACAGTCACAACCCACCAATTATTCATAGAGACTTAAAA
TGTGACAATATATTTGTCAATGGAAATCATGGGGAAGTTAAAATTGGAGACCTCGGACTG
GCAATTGTTATGCAGCAGCCTACTGCTCGAAGTGTTATTGGGACTCCCGAGTTCATGGCT
CCAGAGCTTTATGAAGAAGAATATAACGAACTTGTCGACATATATTCTTTTGGGATGTGC
ATGTTGGAGATGGTTACTTTTGAGTATCCATATAATGAATGCAAAAATCCGGCTCAAATC
TATAAGAAGGTTACCTCTGGCATCAAACCTGCTTCTCTTTGTAAGGTGACGGATCTCCAA
ATTAAGGAGTTCATTGTGAAATGTCTGGCTCCAGCATCTGAAAGATTACCTGCAAAGGAG
CTTCTCAAAGATCCATTCTTTCAATCTGAGAATCCAAAGGAGCCGATCCGTGTCCCTTTG
CAGTTACCTTCCCGAAGTCCCAAATCAATAATTCTATCCAAATCTGGGCCTTTCTCCATG
GACATAGATCCTGACCATCCACAACTTTCTTCAAGCACAAGTACAGAAAACAATGGAAGT
CCAGATTTTCCAGTCTTGGAATTTCAGAGGATGTACAAAAGCAGTGAATTTAGATTGAGG
GCAAAGAAAATTAATGATAACTCAATATCATTAACTTTGCGTACTGTTGACTCGTATGGT
CCAGTGAAGAATATTCATTTTCCCTTTTCACTTGATACTGACACTGTACACTCTGTAGTG
GGTGAGATGGTTGAACAACTGGAGTTAGCAGAACATGAGGTGGCCTTCATAGCTGATTTT
ATTGATTACGTGATAATGAGACTTCTGCCCGGTTGGAAGCCTCCACGTGATGATCCCTTA
GGTGGAGCAAGGAGTCCAAATGCAGAGCCTCCAGTACTTGGAAATGGTAACAACCATGAT
TGTACTATTTCCCATGGTGATGGTAATTCTTCTCCAAATTTGGCTAATGCAGAAGATCAG
GATTCATTGGCATCTGCTGGTTTGGTGACCCTGACTGTAGATGCTTCCAAAAAAAATGAT
AAAACGGTGGGATTTGGAGATTACAATATTGGTGGCAACTATAAAGGTTCAAATGGTGGG
CATGCCTCTGAACAGGAGTCTAGGGATCCATACCATGAAGACTACAAATTGCAAAGAAAT
AATAGCAGTATTGAGGAATTTACCCCAATGAACAAATTCCAGAAGAGCACGGTATTGTCT
TTCGATGATTTAAGTGGACTTTCTAATGTTAGGAGCTTGACTTGTAGTTGCTCATCTCTG
TCTCTAGCAGACATAGATCAGGATCCTGGGCTAAAGCAGGAGCTTGATGCTATTGACTTA
CAGTATCAGCATTGGTTTCAAGAGCTTTCTAGGATGAGAGTAGAGGCATTAGAGGCCACT
AAGAAGAGATGGATGACAAAGAAGAAGCTGGCTGTTCAATGA

Peptide Sequence

PEP ID

VIT_15s0046g00100.t01
PEP Infomation

pep chromosome:12X:15:17151522:17154829:-1 gene:VIT_15s0046g00100 transcript:VIT_15s0046g00100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNFRHGLVMQGAEDEDEAAYVEKDPTGRYVRFKEILGKGAFKTVYKAFDEVDGIEIAWNQ
VKIDDVLRSPEDLEKLYSEVHLLKSLKHENIIKFYNSWVDDKKKTVNMITELFTSGSLRQ
YRKKHKNVDMKAIKNWARQVLRGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGL
AIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVTFEYPYNECKNPAQI
YKKVTSGIKPASLCKVTDLQIKEFIVKCLAPASERLPAKELLKDPFFQSENPKEPIRVPL
QLPSRSPKSIILSKSGPFSMDIDPDHPQLSSSTSTENNGSPDFPVLEFQRMYKSSEFRLR
AKKINDNSISLTLRTVDSYGPVKNIHFPFSLDTDTVHSVVGEMVEQLELAEHEVAFIADF
IDYVIMRLLPGWKPPRDDPLGGARSPNAEPPVLGNGNNHDCTISHGDGNSSPNLANAEDQ
DSLASAGLVTLTVDASKKNDKTVGFGDYNIGGNYKGSNGGHASEQESRDPYHEDYKLQRN
NSSIEEFTPMNKFQKSTVLSFDDLSGLSNVRSLTCSCSSLSLADIDQDPGLKQELDAIDL
QYQHWFQELSRMRVEALEATKKRWMTKKKLAVQ

Transcript Sequence

Transcript ID

VIT_15s0046g00100.t01
Transcript Infomation

cdna chromosome:12X:15:17151522:17154829:-1 gene:VIT_15s0046g00100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATTTTAGGCATGGTTTGGTAATGCAAGGGGCTGAGGACGAGGACGAGGCCGCCTAT
GTCGAGAAAGATCCCACTGGTCGATATGTTCGGTTCAAAGAAATATTGGGCAAGGGCGCA
TTCAAGACTGTCTATAAGGCATTTGACGAAGTTGATGGAATAGAAATCGCTTGGAACCAA
GTGAAGATTGACGATGTCTTGCGGTCACCAGAAGATTTGGAAAAACTATATTCTGAAGTT
CATCTCCTGAAATCATTAAAACATGAAAATATTATCAAATTCTATAATTCCTGGGTGGAT
GATAAGAAGAAGACTGTTAACATGATTACTGAGCTCTTCACGTCTGGGAGTCTAAGGCAA
TATCGAAAGAAGCACAAAAATGTTGATATGAAGGCTATAAAGAATTGGGCAAGGCAGGTT
CTTCGAGGTTTGGTGTATCTTCACAGTCACAACCCACCAATTATTCATAGAGACTTAAAA
TGTGACAATATATTTGTCAATGGAAATCATGGGGAAGTTAAAATTGGAGACCTCGGACTG
GCAATTGTTATGCAGCAGCCTACTGCTCGAAGTGTTATTGGGACTCCCGAGTTCATGGCT
CCAGAGCTTTATGAAGAAGAATATAACGAACTTGTCGACATATATTCTTTTGGGATGTGC
ATGTTGGAGATGGTTACTTTTGAGTATCCATATAATGAATGCAAAAATCCGGCTCAAATC
TATAAGAAGGTTACCTCTGGCATCAAACCTGCTTCTCTTTGTAAGGTGACGGATCTCCAA
ATTAAGGAGTTCATTGTGAAATGTCTGGCTCCAGCATCTGAAAGATTACCTGCAAAGGAG
CTTCTCAAAGATCCATTCTTTCAATCTGAGAATCCAAAGGAGCCGATCCGTGTCCCTTTG
CAGTTACCTTCCCGAAGTCCCAAATCAATAATTCTATCCAAATCTGGGCCTTTCTCCATG
GACATAGATCCTGACCATCCACAACTTTCTTCAAGCACAAGTACAGAAAACAATGGAAGT
CCAGATTTTCCAGTCTTGGAATTTCAGAGGATGTACAAAAGCAGTGAATTTAGATTGAGG
GCAAAGAAAATTAATGATAACTCAATATCATTAACTTTGCGTACTGTTGACTCGTATGGT
CCAGTGAAGAATATTCATTTTCCCTTTTCACTTGATACTGACACTGTACACTCTGTAGTG
GGTGAGATGGTTGAACAACTGGAGTTAGCAGAACATGAGGTGGCCTTCATAGCTGATTTT
ATTGATTACGTGATAATGAGACTTCTGCCCGGTTGGAAGCCTCCACGTGATGATCCCTTA
GGTGGAGCAAGGAGTCCAAATGCAGAGCCTCCAGTACTTGGAAATGGTAACAACCATGAT
TGTACTATTTCCCATGGTGATGGTAATTCTTCTCCAAATTTGGCTAATGCAGAAGATCAG
GATTCATTGGCATCTGCTGGTTTGGTGACCCTGACTGTAGATGCTTCCAAAAAAAATGAT
AAAACGGTGGGATTTGGAGATTACAATATTGGTGGCAACTATAAAGGTTCAAATGGTGGG
CATGCCTCTGAACAGGAGTCTAGGGATCCATACCATGAAGACTACAAATTGCAAAGAAAT
AATAGCAGTATTGAGGAATTTACCCCAATGAACAAATTCCAGAAGAGCACGGTATTGTCT
TTCGATGATTTAAGTGGACTTTCTAATGTTAGGAGCTTGACTTGTAGTTGCTCATCTCTG
TCTCTAGCAGACATAGATCAGGATCCTGGGCTAAAGCAGGAGCTTGATGCTATTGACTTA
CAGTATCAGCATTGGTTTCAAGAGCTTTCTAGGATGAGAGTAGAGGCATTAGAGGCCACT
AAGAAGAGATGGATGACAAAGAAGAAGCTGGCTGTTCAATGAAGGGGATGGAGTAATACA
AATTTTTTTCTCCCTTGCAATTAAGTTGTCTCACTGCATACAATGTTCATTGGAGTTTTT
ATTCATATGCACATGCTTGGAGAGCCAATTTTCTGTTAGTCTCGCTTGAGTGTATATATG
ATTTCCGGGATTCAACTAAATCTATTGGATGACTATCTATGTTTGTACTCT