Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_15s0046g00020.t01
CDS Infomation	cds chromosome:12X:15:17118797:17126330:1 gene:VIT_15s0046g00020 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7UCX6]
Sequence	ATGACATTAGATGCGATTACTAGTGTTTCTCTTGCTCCGGCTGCAGAAGTTCTTTCTCAG ATTGTAGAGATTATGATTGAGGTTGCAGTTGCAGCTGATGATGTCCTGATTGAGAAGAGG AGTTTTGCAGAGCTCCAACATTACTTGCAAAGGATCATTCCCATCCTAAAGGAGTTGAAT AAGAAAGGCATTAGTCATTCCGAGAGCTTAAACAATGCCATTGAGATTCTCAATCGAGAG ACCAAAGTTGCAAAGCAACTAACGCTTGAATGTTGCAAGAAAAACAAAGTTTATCTCTTG ATGCATTGCCGGTCAGTAGTTCAGCGCTTAGAGAACACTACAAGAGAGATGAGCCGTGCA CTAAGCCTCATTCCGTTGGCTTCATTGGATCTGTCATCAAGTATAATTGAAGAGATTGGA AAGTTGTGTGACAATATGGGGACAGCAGAGTTTAGGGCAGCTATAGCAGAAGAGGAGATT TTGGAGAAAATTGAAGCAGGAATACAGGAGAGGAGTGTCGATCGTTCTTATGCCAATAAT TTACTGGTTCTCATTGCACAGACTCTTGGAATTTCAACCGAGCGGTCTGCATTGAAAAAG GAATTTGAAGAATTTAAGAAAGAGATAGAAAGCACACATGTGAGGAAGAACATGGCAGAA GCTATACAGATGGATCAGATAATTGCTTTACTAGGAAGGGCGGATGCTGCTTCATCTCCT AAGGAGAAAGAAATGAGGTATTTCACCAAACGTAACTCCTTGGGTAGTCAACCATTAGAA CCTCTCCTGTCATTTTATTGCCCAATCACTCGGGATGTGATGACAGACCCGGTGGAGACT TCTTCAGGACAGACATTTGAGAGAAGTGCTATAGAGAAGTGGTTTGCAGATGGGAATAAA TTGTGTCCCTTGACTATGACCCCTTTAGACACATCAATTCTAAGACCCAACAAAACTCTA CGGCAATCAATTGAAGAGTGGAGGGATAGAAACACAATGATTAGAATTGCTTCTATCAAA CCAAAACTCTTGTCAGAAGATGAGGAAGAAGTGCTTAATTGCCTGGAACAGCTACAGGAC CTTTGTGAACAAAGGGACCTTCATCAGGAATGGGTAGTACTGGAGAACTATGCACCAACT CTTATTAAACTTCTTGGTGAAAAAAACCGGGACATAAGGATTCGTGCTCTTCTCATTCTT TGTATCTTGGCAAAGGATAGCGATGACACAAAGGTAAAAATTGTTGAAGTTGATAATTCA ATAGAATCAATTGTTCACTCTCTTGGACGTCGTATTGAGGAAAGGAAGCTAGCTGTAGCT TTACTATTGGAATTATCAAAAAGTGATTTAGTACGAGACAGCATTGGGAAGGTTCAGGGT TGCATACTCCTCTTGGTGACTATGTTAAGCAGTGATGATAATCAAGCTGCCAGAGATGCA CGGGAGCTTTTGGAGAATCTTTCATTCTCTGATCAGAACATTATACAGATGGCAAAAGCA AATTATTTTAAATATTTGCTTCAGCGTCTATCTTCAGGACCAGAAGATGTCAAATGCATC ATGGCAACAACTTTGGCAGAACTGGAGCTGACTGACCCTAATAAATCATCTTTGCTTGAA GATGGTGTATTGGGATCACTTCTTCCCTTGGTCACAAATGGTGAACTTCCGATGAAAATG GTGGCCATCAAAGCTCTTAAAAACCTCTCAAGCTTACAAAAGAACGGCCTGAGGATGATT AAAGAAGGTGCAATGCGCCCATTACTTGAACTTCTCTTTAGTCATGGCCCAGTTCCAAGT TTGCGTGAACAGGCAGCAGCCACAATTATGCACCTTGCCATATCAACCATGTCACAGGAA ACTGAGCAGCCACAGGTGTCATTGCTGGAATCTGATGAGGACATTTTCAAGCTCTTCTCC TTGGTTCACTTGACAGGGCCTGACATACAAAAAAGCATTCTCTGTACCTTCTTTGCTTTA TGTCAATCCCCATCTGCTACAAATATCAAGGCCAAGTTGAGACAGTGCACAGCTGTTCAG GTATTGGTTCAATTATGTGAACTCGATAACCCAGAAGTACGGCCAAATGCTGTTAAACTG TTATCTCGCTTGACTGATGATGGCGAGGAGGCCACCATCTTGGAGCACATGGATCAGAAG GATGTTGAGACCTTAGTTAAGATCATTAAATCTTCTACTGATGAGGACGAGGTTGGTTCT GCAATGGGTATCATCTCTAACCTGCCTGAAGACCCCCAGATCACTCGATGGTTTCTTGAT GCTGGAGCTCTTTCAATCATTTTTAATTTTCTTCGTGATACCAAGCAGAAAGGGCCTTGT AAGGATCAGTTAATAGAGAATACTGTTGGAGCAGTATGCCGTTTCACTGTTTCCACAAAC CAGGAATTACAAAAGAAAGCTGCTGAAGCTGGCATTATACCTGTTTTGGTTCAGTGGTTA GAACGAGGAACCAGCTTGACAAAAAAACGTTCAGCCATTTCGCTTGCACAATTTTCACAA AGTTCACCTAGACTGAGCAGATCATTACCAAAGAGAGGGGGGTTCTTGTGCTTCTCTGCC CCACCAGAAACTGGCTGCCCAGTTCATCGAGGAATCTGCTCAATTGAATCATCATTTTGC CTTCTAGAGGCTGATGCAGTGGGCCCTCTCGTGAGAGTTCTTGCTGAAGCAGACCCACAA GCCTCTGAGGCTTCTTTTGATGCGTTATTGACATTAATTGAAGGAGAGCGATTACAAAGT GGCAGTAAGGTGCTTGCAGATGCAAATGCCATACCACTGATAATAAGATCACTTGGTTCC TCCTCCCCTACATTACAGGAGAAAGCTCTGAATGCCCTAGAAAGGATTTTTCGGCTGGTG GAGTTCAAACAAAGGTATGGAGCCTCTGCACAGATGCCTTTAGTTGACTTAACTCAGCGA GGAAGCAGTAGTACCAAATCTTTGGCAGCCAGAATACTTGCTCACTTGAATGTGCTTCAT GAACAGTCTTCTTACTTTTAA

Peptide Sequence

PEP ID	VIT_15s0046g00020.t01
PEP Infomation	pep chromosome:12X:15:17118797:17126330:1 gene:VIT_15s0046g00020 transcript:VIT_15s0046g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7UCX6]
Sequence	MTLDAITSVSLAPAAEVLSQIVEIMIEVAVAADDVLIEKRSFAELQHYLQRIIPILKELN KKGISHSESLNNAIEILNRETKVAKQLTLECCKKNKVYLLMHCRSVVQRLENTTREMSRA LSLIPLASLDLSSSIIEEIGKLCDNMGTAEFRAAIAEEEILEKIEAGIQERSVDRSYANN LLVLIAQTLGISTERSALKKEFEEFKKEIESTHVRKNMAEAIQMDQIIALLGRADAASSP KEKEMRYFTKRNSLGSQPLEPLLSFYCPITRDVMTDPVETSSGQTFERSAIEKWFADGNK LCPLTMTPLDTSILRPNKTLRQSIEEWRDRNTMIRIASIKPKLLSEDEEEVLNCLEQLQD LCEQRDLHQEWVVLENYAPTLIKLLGEKNRDIRIRALLILCILAKDSDDTKVKIVEVDNS IESIVHSLGRRIEERKLAVALLLELSKSDLVRDSIGKVQGCILLLVTMLSSDDNQAARDA RELLENLSFSDQNIIQMAKANYFKYLLQRLSSGPEDVKCIMATTLAELELTDPNKSSLLE DGVLGSLLPLVTNGELPMKMVAIKALKNLSSLQKNGLRMIKEGAMRPLLELLFSHGPVPS LREQAAATIMHLAISTMSQETEQPQVSLLESDEDIFKLFSLVHLTGPDIQKSILCTFFAL CQSPSATNIKAKLRQCTAVQVLVQLCELDNPEVRPNAVKLLSRLTDDGEEATILEHMDQK DVETLVKIIKSSTDEDEVGSAMGIISNLPEDPQITRWFLDAGALSIIFNFLRDTKQKGPC KDQLIENTVGAVCRFTVSTNQELQKKAAEAGIIPVLVQWLERGTSLTKKRSAISLAQFSQ SSPRLSRSLPKRGGFLCFSAPPETGCPVHRGICSIESSFCLLEADAVGPLVRVLAEADPQ ASEASFDALLTLIEGERLQSGSKVLADANAIPLIIRSLGSSSPTLQEKALNALERIFRLV EFKQRYGASAQMPLVDLTQRGSSSTKSLAARILAHLNVLHEQSSYF

Transcript Sequence

Transcript ID	VIT_15s0046g00020.t01
Transcript Infomation	cdna chromosome:12X:15:17118797:17126330:1 gene:VIT_15s0046g00020 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7UCX6]
Sequence	ATCGTTCCTGTTGATCAGTGCCGAGAAAATTTGGAAAAAGAAAAACAGTTGACATTTTGG GTAAAGGATTTTTCTTGTTTGGCTCCTGGTAAAATCTAAAAACCGCTGAGCCGGATGAAT AATTCTTGGCTTAGTTGGGTTGGGTCTCCATGTTTTTGGGAAACTAGTGACATGGTTAGG ATTTCTTCAAAATTGGCGTGGGAGGTAGGTTGCGATGATATAAAAAAAAAAATGAATGGG GATACAAGACGTGTTTGAGTTGAGTTGATTTGGGAGTTGGCTGACTGTGCCTTCTAACAT GGGACTAGAGGATATTGCTCTGTAGCAATCTTTAGAAGCTTCAGAGATGACATTAGATGC GATTACTAGTGTTTCTCTTGCTCCGGCTGCAGAAGTTCTTTCTCAGATTGTAGAGATTAT GATTGAGGTTGCAGTTGCAGCTGATGATGTCCTGATTGAGAAGAGGAGTTTTGCAGAGCT CCAACATTACTTGCAAAGGATCATTCCCATCCTAAAGGAGTTGAATAAGAAAGGCATTAG TCATTCCGAGAGCTTAAACAATGCCATTGAGATTCTCAATCGAGAGACCAAAGTTGCAAA GCAACTAACGCTTGAATGTTGCAAGAAAAACAAAGTTTATCTCTTGATGCATTGCCGGTC AGTAGTTCAGCGCTTAGAGAACACTACAAGAGAGATGAGCCGTGCACTAAGCCTCATTCC GTTGGCTTCATTGGATCTGTCATCAAGTATAATTGAAGAGATTGGAAAGTTGTGTGACAA TATGGGGACAGCAGAGTTTAGGGCAGCTATAGCAGAAGAGGAGATTTTGGAGAAAATTGA AGCAGGAATACAGGAGAGGAGTGTCGATCGTTCTTATGCCAATAATTTACTGGTTCTCAT TGCACAGACTCTTGGAATTTCAACCGAGCGGTCTGCATTGAAAAAGGAATTTGAAGAATT TAAGAAAGAGATAGAAAGCACACATGTGAGGAAGAACATGGCAGAAGCTATACAGATGGA TCAGATAATTGCTTTACTAGGAAGGGCGGATGCTGCTTCATCTCCTAAGGAGAAAGAAAT GAGGTATTTCACCAAACGTAACTCCTTGGGTAGTCAACCATTAGAACCTCTCCTGTCATT TTATTGCCCAATCACTCGGGATGTGATGACAGACCCGGTGGAGACTTCTTCAGGACAGAC ATTTGAGAGAAGTGCTATAGAGAAGTGGTTTGCAGATGGGAATAAATTGTGTCCCTTGAC TATGACCCCTTTAGACACATCAATTCTAAGACCCAACAAAACTCTACGGCAATCAATTGA AGAGTGGAGGGATAGAAACACAATGATTAGAATTGCTTCTATCAAACCAAAACTCTTGTC AGAAGATGAGGAAGAAGTGCTTAATTGCCTGGAACAGCTACAGGACCTTTGTGAACAAAG GGACCTTCATCAGGAATGGGTAGTACTGGAGAACTATGCACCAACTCTTATTAAACTTCT TGGTGAAAAAAACCGGGACATAAGGATTCGTGCTCTTCTCATTCTTTGTATCTTGGCAAA GGATAGCGATGACACAAAGGTAAAAATTGTTGAAGTTGATAATTCAATAGAATCAATTGT TCACTCTCTTGGACGTCGTATTGAGGAAAGGAAGCTAGCTGTAGCTTTACTATTGGAATT ATCAAAAAGTGATTTAGTACGAGACAGCATTGGGAAGGTTCAGGGTTGCATACTCCTCTT GGTGACTATGTTAAGCAGTGATGATAATCAAGCTGCCAGAGATGCACGGGAGCTTTTGGA GAATCTTTCATTCTCTGATCAGAACATTATACAGATGGCAAAAGCAAATTATTTTAAATA TTTGCTTCAGCGTCTATCTTCAGGACCAGAAGATGTCAAATGCATCATGGCAACAACTTT GGCAGAACTGGAGCTGACTGACCCTAATAAATCATCTTTGCTTGAAGATGGTGTATTGGG ATCACTTCTTCCCTTGGTCACAAATGGTGAACTTCCGATGAAAATGGTGGCCATCAAAGC TCTTAAAAACCTCTCAAGCTTACAAAAGAACGGCCTGAGGATGATTAAAGAAGGTGCAAT GCGCCCATTACTTGAACTTCTCTTTAGTCATGGCCCAGTTCCAAGTTTGCGTGAACAGGC AGCAGCCACAATTATGCACCTTGCCATATCAACCATGTCACAGGAAACTGAGCAGCCACA GGTGTCATTGCTGGAATCTGATGAGGACATTTTCAAGCTCTTCTCCTTGGTTCACTTGAC AGGGCCTGACATACAAAAAAGCATTCTCTGTACCTTCTTTGCTTTATGTCAATCCCCATC TGCTACAAATATCAAGGCCAAGTTGAGACAGTGCACAGCTGTTCAGGTATTGGTTCAATT ATGTGAACTCGATAACCCAGAAGTACGGCCAAATGCTGTTAAACTGTTATCTCGCTTGAC TGATGATGGCGAGGAGGCCACCATCTTGGAGCACATGGATCAGAAGGATGTTGAGACCTT AGTTAAGATCATTAAATCTTCTACTGATGAGGACGAGGTTGGTTCTGCAATGGGTATCAT CTCTAACCTGCCTGAAGACCCCCAGATCACTCGATGGTTTCTTGATGCTGGAGCTCTTTC AATCATTTTTAATTTTCTTCGTGATACCAAGCAGAAAGGGCCTTGTAAGGATCAGTTAAT AGAGAATACTGTTGGAGCAGTATGCCGTTTCACTGTTTCCACAAACCAGGAATTACAAAA GAAAGCTGCTGAAGCTGGCATTATACCTGTTTTGGTTCAGTGGTTAGAACGAGGAACCAG CTTGACAAAAAAACGTTCAGCCATTTCGCTTGCACAATTTTCACAAAGTTCACCTAGACT GAGCAGATCATTACCAAAGAGAGGGGGGTTCTTGTGCTTCTCTGCCCCACCAGAAACTGG CTGCCCAGTTCATCGAGGAATCTGCTCAATTGAATCATCATTTTGCCTTCTAGAGGCTGA TGCAGTGGGCCCTCTCGTGAGAGTTCTTGCTGAAGCAGACCCACAAGCCTCTGAGGCTTC TTTTGATGCGTTATTGACATTAATTGAAGGAGAGCGATTACAAAGTGGCAGTAAGGTGCT TGCAGATGCAAATGCCATACCACTGATAATAAGATCACTTGGTTCCTCCTCCCCTACATT ACAGGAGAAAGCTCTGAATGCCCTAGAAAGGATTTTTCGGCTGGTGGAGTTCAAACAAAG GTATGGAGCCTCTGCACAGATGCCTTTAGTTGACTTAACTCAGCGAGGAAGCAGTAGTAC CAAATCTTTGGCAGCCAGAATACTTGCTCACTTGAATGTGCTTCATGAACAGTCTTCTTA CTTTTAAAAGGAAGTTTACTCTCCTTTGAAGTATATACATTCATTCACATGCTGAGGGGT TGATGGCCAGACCCAGAACCCACCTTGATGCCTTAACCCTGCTAGAATCATTGAACAGGT GGTGCAGGACTTGCATGGGAAGAAATGGAGCTTCACATCTGCAAAACAAAACCCCACATC CTCCTCTCTCCGCTGCAAGCAAGCACACTCTGATTTTGGAAATGGTTCGTGCTTCTTTAC TGCTTGTAGTTGGAAAGCTTTGATATCTGGTATGACTTGAATCCAATTTGTGATATGTCT GTAGAGAAAGTTAAGTTGTTGGAGGGTTGGGAGGTTGATGTTGACTCATTTTTTATGCCA CGGGATCAATTCTCTGTATAATTGATGCTGGATTCGTTTGTGGGTAGGAGGAGTTGGCTG GTGCGATGTAATATTATTTACAATTGAAATCTTTATTGTTATTCATAGAACAGCTTATAT GATTCTCAA