Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0024g00040.t01
CDS Infomation

cds chromosome:12X:15:124100:125350:1 gene:VIT_15s0024g00040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:F6I5I9]
Sequence

ATGGCTGCTCAGGCCTTGGTTTCATCTTCTCTTACTTCCTCAGTGGAGACTGCCAGACAG
ATACTTGGGTCAAGGCCTCTGCAATCTCCATCAAGGAAGTCTTCTTCCTTTGTGGTCAGG
GCAGCTTCTACTCCACCAGTCAAGCAAGGAGCTGACAGGCCCCTCTGGTTTGCATCCAAG
CAGAGCCTTACTTACTTGGATGGCAGTCTTCCAGGTGACTATGGGTTCGATCCACTGGGA
CTTTCAGACCCTGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTAGCCTACGGGGAG
GTCATCAACGGGCGGTATGCCATGCTGGGTGCTGTTGGTGCGATTGCGCCTGAGATACTG
GGGAAGCTGGGCCTCATCCCACCGGAGACCGCCCTGCCTTGGTTCAAAACCGGGGTATTC
CCCCCAGCGGGGACATACAACTACTGGGCAGACCCTTACACACTGTTTGTATTCGAGATG
GCACTGATGGGATTTGCAGAGCACAGGAGATTCCAAGACTGGGCCAACCCAGGGTCAATG
GGGAAGCAGTACTTCCTCGGGCTTGAAAAATACTTGGGAGGGTCTGGCGACCCAGCCTAC
CCAGGAGGCCCACTGTTCAACCCTCTCGGGTTTGGTAAAGATGAGAAATCCCTCAAGGAT
CTGAAGCTCAAAGAGGTTAAGAATGGGAGATTGGCTATGTTGGCCATATTGGGCTACTTT
GCACAAGGGCCTGTGACAGGAGTCGGGCCCCTCCAAAACCTGCTGGACCATTTGGCAGAC
CCTGTCAACAACAATATCATAACCAGCCTCAAGTTCCACAACTAG

Peptide Sequence

PEP ID

VIT_15s0024g00040.t01
PEP Infomation

pep chromosome:12X:15:124100:125350:1 gene:VIT_15s0024g00040 transcript:VIT_15s0024g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:F6I5I9]
Sequence

MAAQALVSSSLTSSVETARQILGSRPLQSPSRKSSSFVVRAASTPPVKQGADRPLWFASK
QSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEIL
GKLGLIPPETALPWFKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSM
GKQYFLGLEKYLGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYF
AQGPVTGVGPLQNLLDHLADPVNNNIITSLKFHN

Transcript Sequence

Transcript ID

VIT_15s0024g00040.t01
Transcript Infomation

cdna chromosome:12X:15:124100:125350:1 gene:VIT_15s0024g00040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:F6I5I9]
Sequence

AGGGCTATTTGGTCTTATTCTTCTTCTTCTTCTTCATCGTCCAAACTCAAAACTCAATCA
GAAACAACAAGAAATGGCTGCTCAGGCCTTGGTTTCATCTTCTCTTACTTCCTCAGTGGA
GACTGCCAGACAGATACTTGGGTCAAGGCCTCTGCAATCTCCATCAAGGAAGTCTTCTTC
CTTTGTGGTCAGGGCAGCTTCTACTCCACCAGTCAAGCAAGGAGCTGACAGGCCCCTCTG
GTTTGCATCCAAGCAGAGCCTTACTTACTTGGATGGCAGTCTTCCAGGTGACTATGGGTT
CGATCCACTGGGACTTTCAGACCCTGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTT
AGCCTACGGGGAGGTCATCAACGGGCGGTATGCCATGCTGGGTGCTGTTGGTGCGATTGC
GCCTGAGATACTGGGGAAGCTGGGCCTCATCCCACCGGAGACCGCCCTGCCTTGGTTCAA
AACCGGGGTATTCCCCCCAGCGGGGACATACAACTACTGGGCAGACCCTTACACACTGTT
TGTATTCGAGATGGCACTGATGGGATTTGCAGAGCACAGGAGATTCCAAGACTGGGCCAA
CCCAGGGTCAATGGGGAAGCAGTACTTCCTCGGGCTTGAAAAATACTTGGGAGGGTCTGG
CGACCCAGCCTACCCAGGAGGCCCACTGTTCAACCCTCTCGGGTTTGGTAAAGATGAGAA
ATCCCTCAAGGATCTGAAGCTCAAAGAGGTTAAGAATGGGAGATTGGCTATGTTGGCCAT
ATTGGGCTACTTTGCACAAGGGCCTGTGACAGGAGTCGGGCCCCTCCAAAACCTGCTGGA
CCATTTGGCAGACCCTGTCAACAACAATATCATAACCAGCCTCAAGTTCCACAACTAGGA
GTCTCATCCTCTTGTTGATTTGCTTCACGATTCACTCTCTCTATGTCCTCTCAGCTGTCA
CCTCTCTCTCTCCCTCATATTTGTAATATTATTATGTGAAGACTTGGCCTTAAATTTTAA
TCAATCAATCAGTAACAAAATCACTGTTTAAAGACTCAAAACA