Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0021g02410.t01
CDS Infomation

cds chromosome:12X:15:13412183:13415839:-1 gene:VIT_15s0021g02410 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D7SLT0]
Sequence

ATGGCGAAAGATGCAGTTAGGGTTCTTGTCACCGGGGCTGCTGGGCAAATAGGGTATGCT
CTTGTTCCAATGATTGCTAGAGGGCTCATGCTTGGCCCAGATCAGCCTGTCATTCTGCAC
ATGCTTGATATTGAACCTGCTGCTGAGGCCCTAAATGGAGTGAAAATGGAGCTGATTGAT
GCTGCCTTTCCTCTTCTCAGAGGAGTTGTTGCTACCACAGATGCCATTGAAGCTTGCAAA
GATGTCAATATTGCAGTTATGGTTGGTGGATTCCCTCGGAAGGAAGGAATGGAAAGGAAG
GATATGATGAAGAAAAATGTATCAATTTATAAGGCTCAAGCTTCAGCCTTGGAGCAACAT
GCTGCTCCAAATTGCAAGGTGCTGGTGGTTGCTAACCCAGCAAACACCAATGCACTTATT
TTGAAGGAATTCGCTCCTTCAATACCAGAGAAAAATGTTACCTGCCTTACCCGACTTGAC
CATAACAGAGCCCTTGGTCAAATCTCGGAGAAGCTGTTTGTCCATGTTGGTGATGTGAAA
AATGCTATCATCTGGGGCAATCATTCTTCAACTCAATACCCGGATGTCAATCATGCAACT
GTCTCCACCTGCAATGGAGAGAAACCAGTTAGAGAACTCATTGCTGATGATAATTGGATA
AACACCGAGTTCATCACCACTGTGCAGCAGCGTGGGGCAGCCATCATCAAAGCTCGGAAA
CTATCAAGTGCATTATCTGCTGCAAGTTCTGCTTGTGATCACATACGCGATTGGGTTCTT
GGAACTCCCAAGGGAGCATGGGTCTCTATGGGAGTGTACTCAGATGGTTCTTATGGGATC
CAACCAGGCATCATCTACTCTTTTCCTGTTACCTGTGAGAAAGGGGAGTGGTCCATTGTG
CAGGGGCTGAAGATCGATGAATTTTCAAGAGGAAAGATGGATGCCACAGCCAAAGAGCTC
ATGGAGGAGAAAGCATTGGCCTATTCATGCCTCAACTGA

Peptide Sequence

PEP ID

VIT_15s0021g02410.t01
PEP Infomation

pep chromosome:12X:15:13412183:13415839:-1 gene:VIT_15s0021g02410 transcript:VIT_15s0021g02410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D7SLT0]
Sequence

MAKDAVRVLVTGAAGQIGYALVPMIARGLMLGPDQPVILHMLDIEPAAEALNGVKMELID
AAFPLLRGVVATTDAIEACKDVNIAVMVGGFPRKEGMERKDMMKKNVSIYKAQASALEQH
AAPNCKVLVVANPANTNALILKEFAPSIPEKNVTCLTRLDHNRALGQISEKLFVHVGDVK
NAIIWGNHSSTQYPDVNHATVSTCNGEKPVRELIADDNWINTEFITTVQQRGAAIIKARK
LSSALSAASSACDHIRDWVLGTPKGAWVSMGVYSDGSYGIQPGIIYSFPVTCEKGEWSIV
QGLKIDEFSRGKMDATAKELMEEKALAYSCLN

Transcript Sequence

Transcript ID

VIT_15s0021g02410.t01
Transcript Infomation

cdna chromosome:12X:15:13412183:13415839:-1 gene:VIT_15s0021g02410 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D7SLT0]
Sequence

AAAATGGAGGACAAGGTCAACCCTGAAGATTAGCAAGAAAACAACTTGGTTTCATGCATG
GAGCATGGGTGACGACTCTTTCCAACTCTCTCCCCTTCTATTCTGCAACCATGGCGAAAG
ATGCAGTTAGGGTTCTTGTCACCGGGGCTGCTGGGCAAATAGGGTATGCTCTTGTTCCAA
TGATTGCTAGAGGGCTCATGCTTGGCCCAGATCAGCCTGTCATTCTGCACATGCTTGATA
TTGAACCTGCTGCTGAGGCCCTAAATGGAGTGAAAATGGAGCTGATTGATGCTGCCTTTC
CTCTTCTCAGAGGAGTTGTTGCTACCACAGATGCCATTGAAGCTTGCAAAGATGTCAATA
TTGCAGTTATGGTTGGTGGATTCCCTCGGAAGGAAGGAATGGAAAGGAAGGATATGATGA
AGAAAAATGTATCAATTTATAAGGCTCAAGCTTCAGCCTTGGAGCAACATGCTGCTCCAA
ATTGCAAGGTGCTGGTGGTTGCTAACCCAGCAAACACCAATGCACTTATTTTGAAGGAAT
TCGCTCCTTCAATACCAGAGAAAAATGTTACCTGCCTTACCCGACTTGACCATAACAGAG
CCCTTGGTCAAATCTCGGAGAAGCTGTTTGTCCATGTTGGTGATGTGAAAAATGCTATCA
TCTGGGGCAATCATTCTTCAACTCAATACCCGGATGTCAATCATGCAACTGTCTCCACCT
GCAATGGAGAGAAACCAGTTAGAGAACTCATTGCTGATGATAATTGGATAAACACCGAGT
TCATCACCACTGTGCAGCAGCGTGGGGCAGCCATCATCAAAGCTCGGAAACTATCAAGTG
CATTATCTGCTGCAAGTTCTGCTTGTGATCACATACGCGATTGGGTTCTTGGAACTCCCA
AGGGAGCATGGGTCTCTATGGGAGTGTACTCAGATGGTTCTTATGGGATCCAACCAGGCA
TCATCTACTCTTTTCCTGTTACCTGTGAGAAAGGGGAGTGGTCCATTGTGCAGGGGCTGA
AGATCGATGAATTTTCAAGAGGAAAGATGGATGCCACAGCCAAAGAGCTCATGGAGGAGA
AAGCATTGGCCTATTCATGCCTCAACTGAATATGCCTTAATGCTTCCAAGGCAAAAAAAA
TAAAAAAAATAAAAGAGGAGATTCAATACAAATCAATAAACCGAAATAAATAAATAAGAA
AAGTTTAGTATGTAATGAATAAGCATCCACC