Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_15s0021g01560.t01
CDS Infomation

cds chromosome:12X:15:12156167:12183172:-1 gene:VIT_15s0021g01560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine carboxyl methyltransferase 1 homolog [Source:UniProtKB/TrEMBL;Acc:D7SLY5]
Sequence

ATGGCCGATTCACACAGTAACAGAGCAGCCGTTCAAGCCACGAACGACGACGCCTCGGCC
AGTAAACTGTCCTGCATCAAAAAGGGATACATGAAAGATGATTACATCCATTTGTTTGTA
AGAAGACCTGTGAGGAGATCTCCAATAATTAACCGTGGTTATTTTGCTCGTTGGGCTGCT
CTCCGGAAGCTTCTCTATCAATTTCTGAGTTGTGAAAGAGATGCCAAAGAACAAGGTCAT
GCAAAGAAGCAGATATTATCACTTGGAGCTGGGTTTGATACAACATATTTTCAGTTGCAG
GATGAAGGGAAAGCTCCGTACATATATGTGGAACTCGATTTTAAAGAGGTTACTAGTAAA
AAGGCAGCTATCATTGAAACTTGCAGTCAATTGAGGGACAAAGTTGGAGCAACAGCATCA
ATTTCACGAGAAAAAGGGGAGGTACTCAGTGATCACTATAAACTCCTCCCTGTTGATTTG
CGTGATATACAAAAATTAGATGATGTCATAGCAATGGCTAACATGGATCCCAGTCTGCCA
ACATTTATAATTGCAGAATGCGTTTTAATATACTTGGATCCAGATTCAAGTCGTGGTATT
GTTGCTTGGGCTTCAAAAAAGTTTTCTACAGCAGTATTTTTCTTATATGAGCAGATCCAT
CCAGATGATGCCTTCGGGCAGCAAATGATCAGAAATTTGGAGAGTAGAGGTTGTGCGCTC
TTGGGCATTTATGAGACACCAACTTTACTTGCAAAGGAAAAACTTTTTCTTGACCAGGGC
TGGCAGCGTGCTGTTGCCTGGGACATGCTTAGAATTTATAGTAATTTTGTTGATGCTCAA
GAAAGGCGCAGGATTGAACGGCTGGAATTGTTTGATGAGTTTGAAGAGTGGCACATGATG
CAGGAGCATTATTGTGTGGCTTATGCAATCAACGATGCCATGGGCTTGTTGGGGGACTTT
GGCTTCCCTAAGGACGACCACGTGCCCTGCAGCCCCTCAGCAGCACCACCATGA

Peptide Sequence

PEP ID

VIT_15s0021g01560.t01
PEP Infomation

pep chromosome:12X:15:12156167:12183172:-1 gene:VIT_15s0021g01560 transcript:VIT_15s0021g01560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine carboxyl methyltransferase 1 homolog [Source:UniProtKB/TrEMBL;Acc:D7SLY5]
Sequence

MADSHSNRAAVQATNDDASASKLSCIKKGYMKDDYIHLFVRRPVRRSPIINRGYFARWAA
LRKLLYQFLSCERDAKEQGHAKKQILSLGAGFDTTYFQLQDEGKAPYIYVELDFKEVTSK
KAAIIETCSQLRDKVGATASISREKGEVLSDHYKLLPVDLRDIQKLDDVIAMANMDPSLP
TFIIAECVLIYLDPDSSRGIVAWASKKFSTAVFFLYEQIHPDDAFGQQMIRNLESRGCAL
LGIYETPTLLAKEKLFLDQGWQRAVAWDMLRIYSNFVDAQERRRIERLELFDEFEEWHMM
QEHYCVAYAINDAMGLLGDFGFPKDDHVPCSPSAAPP

Transcript Sequence

Transcript ID

VIT_15s0021g01560.t01
Transcript Infomation

cdna chromosome:12X:15:12156167:12183172:-1 gene:VIT_15s0021g01560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine carboxyl methyltransferase 1 homolog [Source:UniProtKB/TrEMBL;Acc:D7SLY5]
Sequence

GAAAAAATGGCGAACACTATGGCCGATTCACACAGTAACAGAGCAGCCGTTCAAGCCACG
AACGACGACGCCTCGGCCAGTAAACTGTCCTGCATCAAAAAGGGATACATGAAAGATGAT
TACATCCATTTGTTTGTAAGAAGACCTGTGAGGAGATCTCCAATAATTAACCGTGGTTAT
TTTGCTCGTTGGGCTGCTCTCCGGAAGCTTCTCTATCAATTTCTGAGTTGTGAAAGAGAT
GCCAAAGAACAAGGTCATGCAAAGAAGCAGATATTATCACTTGGAGCTGGGTTTGATACA
ACATATTTTCAGTTGCAGGATGAAGGGAAAGCTCCGTACATATATGTGGAACTCGATTTT
AAAGAGGTTACTAGTAAAAAGGCAGCTATCATTGAAACTTGCAGTCAATTGAGGGACAAA
GTTGGAGCAACAGCATCAATTTCACGAGAAAAAGGGGAGGTACTCAGTGATCACTATAAA
CTCCTCCCTGTTGATTTGCGTGATATACAAAAATTAGATGATGTCATAGCAATGGCTAAC
ATGGATCCCAGTCTGCCAACATTTATAATTGCAGAATGCGTTTTAATATACTTGGATCCA
GATTCAAGTCGTGGTATTGTTGCTTGGGCTTCAAAAAAGTTTTCTACAGCAGTATTTTTC
TTATATGAGCAGATCCATCCAGATGATGCCTTCGGGCAGCAAATGATCAGAAATTTGGAG
AGTAGAGGTTGTGCGCTCTTGGGCATTTATGAGACACCAACTTTACTTGCAAAGGAAAAA
CTTTTTCTTGACCAGGGCTGGCAGCGTGCTGTTGCCTGGGACATGCTTAGAATTTATAGT
AATTTTGTTGATGCTCAAGAAAGGCGCAGGATTGAACGGCTGGAATTGTTTGATGAGTTT
GAAGAGTGGCACATGATGCAGGAGCATTATTGTGTGGCTTATGCAATCAACGATGCCATG
GGCTTGTTGGGGGACTTTGGCTTCCCTAAGGACGACCACGTGCCCTGCAGCCCCTCAGCA
GCACCACCATGAAGGGATGAGGGTACATCTCATCAGAATTCTTTGTCAAGCTGTGAGGTA
CACAATGAGCACAGAAATCATGTGCAACCGACACGTGCCAGTTTCTCACCAGATGGTTGT
CAGGTAAAAAGGGT